Publications by authors named "Eliezer Van Allen"

100Publications

Integrated Analysis of Germ Cell Tumors.

Methods Mol Biol 2021 ;2195:181-187

Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.

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http://dx.doi.org/10.1007/978-1-0716-0860-9_13DOI Listing
January 2021

CoMut: visualizing integrated molecular information with comutation plots.

Bioinformatics 2020 Aug;36(15):4348-4349

Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA 02215, USA.

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http://dx.doi.org/10.1093/bioinformatics/btaa554DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7520041PMC
August 2020

Germline Features Associated with Immune Infiltration in Solid Tumors.

Cell Rep 2020 03;30(9):2900-2908.e4

Center for Computational Molecular Biology, Brown University, Providence, RI 02912, USA; Department of Ecology and Evolutionary Biology, Brown University, Providence, RI 02912, USA. Electronic address:

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http://dx.doi.org/10.1016/j.celrep.2020.02.039DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7082123PMC
March 2020

Identification of cancer driver genes based on nucleotide context.

Nat Genet 2020 02 3;52(2):208-218. Epub 2020 Feb 3.

Division of Genetics, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA.

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http://dx.doi.org/10.1038/s41588-019-0572-yDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7031046PMC
February 2020

The role of site-specific therapy for cancers of unknown of primary: A meta-analysis.

Eur J Cancer 2020 03 30;127:118-122. Epub 2020 Jan 30.

University of Ioannina, Ioannina, Greece.

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http://dx.doi.org/10.1016/j.ejca.2019.12.016DOI Listing
March 2020

Finding the edge of the seat.

Nat Med 2019 09;25(9):1328

Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.

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http://dx.doi.org/10.1038/s41591-019-0557-5DOI Listing
September 2019

Mechanisms of Resistance to Immune Checkpoint Blockade: Why Does Checkpoint Inhibitor Immunotherapy Not Work for All Patients?

Am Soc Clin Oncol Educ Book 2019 Jan 17;39:147-164. Epub 2019 May 17.

5 Division of Hematology and Oncology, Huntsman Cancer Institute, University of Utah, Salt Lake City, UT.

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http://dx.doi.org/10.1200/EDBK_240837DOI Listing
January 2019

Genomic correlates of response to immune checkpoint blockade.

Nat Med 2019 03 6;25(3):389-402. Epub 2019 Mar 6.

Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.

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http://dx.doi.org/10.1038/s41591-019-0382-xDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6599710PMC
March 2019

Genomics of response to immune checkpoint therapies for cancer: implications for precision medicine.

Genome Med 2018 11 29;10(1):93. Epub 2018 Nov 29.

Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, 02215, USA.

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http://dx.doi.org/10.1186/s13073-018-0605-7DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6264032PMC
November 2018

Intron retention is a source of neoepitopes in cancer.

Nat Biotechnol 2018 12 16;36(11):1056-1058. Epub 2018 Aug 16.

Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts, USA.

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http://dx.doi.org/10.1038/nbt.4239DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6226333PMC
December 2018

LSD1 Ablation Stimulates Anti-tumor Immunity and Enables Checkpoint Blockade.

Cell 2018 07 21;174(3):549-563.e19. Epub 2018 Jun 21.

Division of Newborn Medicine and Epigenetics Program, Boston Children's Hospital, Boston, MA 02115, USA; Department of Cell Biology, Harvard Medical School, Boston, MA 02115, USA. Electronic address:

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http://dx.doi.org/10.1016/j.cell.2018.05.052DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6063761PMC
July 2018

Early loss of mitochondrial complex I and rewiring of glutathione metabolism in renal oncocytoma.

Proc Natl Acad Sci U S A 2018 07 18;115(27):E6283-E6290. Epub 2018 Jun 18.

Howard Hughes Medical Institute and Department of Molecular Biology, Massachusetts General Hospital, Boston, MA 02114;

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http://dx.doi.org/10.1073/pnas.1711888115DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6142220PMC
July 2018

Inherited DNA-Repair Defects in Colorectal Cancer.

Am J Hum Genet 2018 03 22;102(3):401-414. Epub 2018 Feb 22.

Department of Medical Oncology, Dana-Farber Cancer Institute and Harvard Medical School, Boston, MA 02215, USA; The Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA. Electronic address:

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http://dx.doi.org/10.1016/j.ajhg.2018.01.018DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5985280PMC
March 2018

Genomic Resistance Patterns to Second-Generation Androgen Blockade in Paired Tumor Biopsies of Metastatic Castration-Resistant Prostate Cancer.

JCO Precis Oncol 2017 11;1. Epub 2017 Dec 11.

, , , , , , , , and , Dana-Farber Cancer Institute; , , , and , Brigham and Women's Hospital; and , Beth Israel Deaconess Medical Center, Boston; , , , , , , , and , Broad Institute of Harvard and Massachusetts Institute of Technology, Cambridge, MA; and , University of California San Diego, La Jolla, CA.

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http://dx.doi.org/10.1200/PO.17.00140DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7446377PMC
December 2017

Tumor Evolution: A Problem of Histocompatibility.

Cell 2017 11;171(6):1252-1253

Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA; Cancer Program, Broad Institute of MIT and Harvard, Cambridge, MA, USA; Center for Cancer Precision Medicine, Dana-Farber Cancer Institute, Boston, MA, USA. Electronic address:

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http://dx.doi.org/10.1016/j.cell.2017.11.012DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7041890PMC
November 2017

Profiling of PD-1 Blockade Using Organotypic Tumor Spheroids.

Cancer Discov 2018 02 3;8(2):196-215. Epub 2017 Nov 3.

Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts.

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http://dx.doi.org/10.1158/2159-8290.CD-17-0833DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5809290PMC
February 2018

The Potential and Challenges of Expanded Germline Testing in Clinical Oncology.

JAMA 2017 09;318(9):801-803

Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts.

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http://dx.doi.org/10.1001/jama.2017.11022DOI Listing
September 2017

Toward Molecularly Driven Precision Medicine in Lung Adenocarcinoma.

Cancer Discov 2017 06;7(6):555-557

Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts.

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http://dx.doi.org/10.1158/2159-8290.CD-17-0355DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7043263PMC
June 2017

Loss of PTEN Is Associated with Resistance to Anti-PD-1 Checkpoint Blockade Therapy in Metastatic Uterine Leiomyosarcoma.

Immunity 2017 02;46(2):197-204

Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA 02215, USA; Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA; Center for Cancer Precision Medicine, Dana-Farber Cancer Institute, Boston, MA 02215, USA. Electronic address:

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http://dx.doi.org/10.1016/j.immuni.2017.02.001DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5408320PMC
February 2017

Delivering on the promise of precision cancer medicine.

Genome Med 2016 10 25;8(1):110. Epub 2016 Oct 25.

Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, 02215, USA.

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http://dx.doi.org/10.1186/s13073-016-0373-1DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5078954PMC
October 2016