Edward L Huttlin

Edward L Huttlin

UNVERIFIED PROFILE

Are you Edward L Huttlin?   Register this Author

Register author
Edward L Huttlin

Edward L Huttlin

Publications by authors named "Edward L Huttlin"

Are you Edward L Huttlin?   Register this Author

42Publications

1129Reads

47Profile Views

High-Definition Analysis of Host Protein Stability during Human Cytomegalovirus Infection Reveals Antiviral Factors and Viral Evasion Mechanisms.

Authors:
Katie Nightingale Kai-Min Lin Benjamin J Ravenhill Colin Davies Luis Nobre Ceri A Fielding Eva Ruckova Alice Fletcher-Etherington Lior Soday Hester Nichols Daniel Sugrue Eddie C Y Wang Pablo Moreno Yagnesh Umrania Edward L Huttlin Robin Antrobus Andrew J Davison Gavin W G Wilkinson Richard J Stanton Peter Tomasec Michael P Weekes

Cell Host Microbe 2018 09 16;24(3):447-460.e11. Epub 2018 Aug 16.

Cambridge Institute for Medical Research, University of Cambridge, Hills Road, Cambridge CB2 0XY, UK. Electronic address:

View Article

Download full-text PDF

 Source
http://dx.doi.org/10.1016/j.chom.2018.07.011DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6146656PMC
September 2018

Characterization of Plasmodium falciparum Atypical Kinase PfPK7 Dependent Phosphoproteome.

Authors:
Brittany N Pease Edward L Huttlin Mark P Jedrychowski Dominique Dorin-Semblat Daniela Sebastiani Daniel T Segarra Bracken F Roberts Ratna Chakrabarti Christian Doerig Steven P Gygi Debopam Chakrabarti

J Proteome Res 2018 06 30;17(6):2112-2123. Epub 2018 Apr 30.

Division of Molecular Biology and Microbiology, Burnett School of Biomedical Sciences , University of Central Florida , Orlando , Florida 32826 , United States.

View Article

Download full-text PDF

 Source
http://dx.doi.org/10.1021/acs.jproteome.8b00062DOI Listing
June 2018

DNAJC12: A molecular chaperone involved in proteostasis, PKU, biogenic amines metabolism and beyond?

Authors:
Juliette Bouchereau Edward L Huttlin Virginia Guarani Samia Pichard Yair Anikster Manuel Schiff

Mol Genet Metab 2018 03 12;123(3):285-286. Epub 2018 Feb 12.

Reference Center for Inborn Errors of Metabolism, Robert Debré University Hospital, APHP, Paris 75019, France; Sackler Faculty of Medicine, Tel-Aviv University, Tel-Aviv, Israel. Electronic address:

View Article

Download full-text PDF

 Source
http://dx.doi.org/10.1016/j.ymgme.2018.01.006DOI Listing
March 2018

Systematic Analysis of Human Cells Lacking ATG8 Proteins Uncovers Roles for GABARAPs and the CCZ1/MON1 Regulator C18orf8/RMC1 in Macroautophagic and Selective Autophagic Flux.

Authors:
Laura Pontano Vaites Joao A Paulo Edward L Huttlin J Wade Harper

Mol Cell Biol 2018 01 13;38(1). Epub 2017 Dec 13.

Department of Cell Biology, Harvard Medical School, Boston, Massachusetts, USA

View Article

Download full-text PDF

 Source
http://dx.doi.org/10.1128/MCB.00392-17DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5730722PMC
January 2018

BioPlex Display: An Interactive Suite for Large-Scale AP-MS Protein-Protein Interaction Data.

Authors:
Devin K Schweppe Edward L Huttlin J Wade Harper Steven P Gygi

J Proteome Res 2018 01 31;17(1):722-726. Epub 2017 Oct 31.

Department of Cell Biology, Harvard Medical School , Boston, Massachusetts 02115, United States.

View Article

Download full-text PDF

 Source
http://dx.doi.org/10.1021/acs.jproteome.7b00572DOI Listing
January 2018

Compositional Proteomics: Effects of Spatial Constraints on Protein Quantification Utilizing Isobaric Tags.

Authors:
Jonathon J O'Brien Jeremy D O'Connell Joao A Paulo Sanjukta Thakurta Christopher M Rose Michael P Weekes Edward L Huttlin Steven P Gygi

J Proteome Res 2018 01 15;17(1):590-599. Epub 2017 Dec 15.

Department of Cell Biology, Harvard Medical School , Boston, Massachusetts 02115, United States.

View Article

Download full-text PDF

 Source
http://dx.doi.org/10.1021/acs.jproteome.7b00699DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5806995PMC
January 2018

Architecture of the human interactome defines protein communities and disease networks.

Authors:
Edward L Huttlin Raphael J Bruckner Joao A Paulo Joe R Cannon Lily Ting Kurt Baltier Greg Colby Fana Gebreab Melanie P Gygi Hannah Parzen John Szpyt Stanley Tam Gabriela Zarraga Laura Pontano-Vaites Sharan Swarup Anne E White Devin K Schweppe Ramin Rad Brian K Erickson Robert A Obar K G Guruharsha Kejie Li Spyros Artavanis-Tsakonas Steven P Gygi J Wade Harper

Nature 2017 05 17;545(7655):505-509. Epub 2017 May 17.

Department of Cell Biology, Harvard Medical School, Boston, Massachusetts 02115, USA.

View Article

Download full-text PDF

 Source
http://www.nature.com/doifinder/10.1038/nature22366
Publisher Site
http://dx.doi.org/10.1038/nature22366DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5531611PMC
May 2017

Neutral Loss Is a Very Common Occurrence in Phosphotyrosine-Containing Peptides Labeled with Isobaric Tags.

Authors:
Robert A Everley Edward L Huttlin Alison R Erickson Sean A Beausoleil Steven P Gygi

J Proteome Res 2017 02 30;16(2):1069-1076. Epub 2016 Dec 30.

Department of Cell Biology, Harvard Medical School , Boston, Massachusetts 02115, United States.

View Article

Download full-text PDF

 Source
http://dx.doi.org/10.1021/acs.jproteome.6b00487DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5479408PMC
February 2017

Biallelic Mutations in DNAJC12 Cause Hyperphenylalaninemia, Dystonia, and Intellectual Disability.

Authors:
Yair Anikster Tobias B Haack Thierry Vilboux Ben Pode-Shakked Beat Thöny Nan Shen Virginia Guarani Thomas Meissner Ertan Mayatepek Friedrich K Trefz Dina Marek-Yagel Aurora Martinez Edward L Huttlin Joao A Paulo Riccardo Berutti Jean-François Benoist Apolline Imbard Imen Dorboz Gali Heimer Yuval Landau Limor Ziv-Strasser May Christine V Malicdan Corinne Gemperle-Britschgi Kirsten Cremer Hartmut Engels David Meili Irene Keller Rémy Bruggmann Tim M Strom Thomas Meitinger James C Mullikin Gerard Schwartz Bruria Ben-Zeev William A Gahl J Wade Harper Nenad Blau Georg F Hoffmann Holger Prokisch Thomas Opladen Manuel Schiff

Am J Hum Genet 2017 02 26;100(2):257-266. Epub 2017 Jan 26.

UMR1141, PROTECT, INSERM, Université Paris Diderot, Sorbonne Paris Cité, Paris 75019, France; Reference Center for Inborn Errors of Metabolism, Robert Debré University Hospital, APHP, Paris 75019, France. Electronic address:

View Article

Download full-text PDF

 Source
http://dx.doi.org/10.1016/j.ajhg.2017.01.002DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5294665PMC
February 2017

Defining the consequences of genetic variation on a proteome-wide scale.

Authors:
Joel M Chick Steven C Munger Petr Simecek Edward L Huttlin Kwangbom Choi Daniel M Gatti Narayanan Raghupathy Karen L Svenson Gary A Churchill Steven P Gygi

Nature 2016 06 15;534(7608):500-5. Epub 2016 Jun 15.

Harvard Medical School, Boston, Massachusetts 02115, USA.

View Article

Download full-text PDF

 Source
http://dx.doi.org/10.1038/nature18270DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5292866PMC
June 2016

Corrigendum: Systematic proteomics of the VCP-UBXD adaptor network identifies a role for UBXN10 in regulating ciliogenesis.

Authors:
Malavika Raman Mikhail Sergeev Maija Garnaas John R Lydeard Edward L Huttlin Wolfram Goessling Jagesh V Shah J Wade Harper

Nat Cell Biol 2016 Mar;18(3):347

View Article

Download full-text PDF

 Source
http://dx.doi.org/10.1038/ncb3318DOI Listing
March 2016

Systematic proteomics of the VCP-UBXD adaptor network identifies a role for UBXN10 in regulating ciliogenesis.

Authors:
Malavika Raman Mikhail Sergeev Maija Garnaas John R Lydeard Edward L Huttlin Wolfram Goessling Jagesh V Shah J Wade Harper

Nat Cell Biol 2015 Oct 21;17(10):1356-69. Epub 2015 Sep 21.

Department of Cell Biology, Harvard Medical School, 240 Longwood Avenue, Boston, Massachusetts 02115, USA.

View Article

Download full-text PDF

 Source
http://dx.doi.org/10.1038/ncb3238DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4610257PMC
October 2015

Quantitative Proteomic Atlas of Ubiquitination and Acetylation in the DNA Damage Response.

Authors:
Andrew E H Elia Alexander P Boardman David C Wang Edward L Huttlin Robert A Everley Noah Dephoure Chunshui Zhou Itay Koren Steven P Gygi Stephen J Elledge

Mol Cell 2015 Sep 4;59(5):867-81. Epub 2015 Jun 4.

Department of Genetics, Harvard Medical School; Division of Genetics, Brigham and Women's Hospital; Howard Hughes Medical Institute, Boston, MA 02115, USA. Electronic address:

View Article

Download full-text PDF

 Source
http://dx.doi.org/10.1016/j.molcel.2015.05.006DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4560960PMC
September 2015

Erratum: A mass-tolerant database search identifies a large proportion of unassigned spectra in shotgun proteomics as modified peptides.

Authors:
Joel M Chick Deepak Kolippakkam David P Nusinow Bo Zhai Ramin Rad Edward L Huttlin Steven P Gygi

Nat Biotechnol 2015 Aug;33(8):882

View Article

Download full-text PDF

 Source
http://dx.doi.org/10.1038/nbt0815-882dDOI Listing
August 2015

A mass-tolerant database search identifies a large proportion of unassigned spectra in shotgun proteomics as modified peptides.

Authors:
Joel M Chick Deepak Kolippakkam David P Nusinow Bo Zhai Ramin Rad Edward L Huttlin Steven P Gygi

Nat Biotechnol 2015 Jul 15;33(7):743-9. Epub 2015 Jun 15.

Department of Cell Biology, Harvard Medical School, Boston, Massachusetts, USA.

View Article

Download full-text PDF

 Source
http://dx.doi.org/10.1038/nbt.3267DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4515955PMC
July 2015

The BioPlex Network: A Systematic Exploration of the Human Interactome.

Authors:
Edward L Huttlin Lily Ting Raphael J Bruckner Fana Gebreab Melanie P Gygi John Szpyt Stanley Tam Gabriela Zarraga Greg Colby Kurt Baltier Rui Dong Virginia Guarani Laura Pontano Vaites Alban Ordureau Ramin Rad Brian K Erickson Martin Wühr Joel Chick Bo Zhai Deepak Kolippakkam Julian Mintseris Robert A Obar Tim Harris Spyros Artavanis-Tsakonas Mathew E Sowa Pietro De Camilli Joao A Paulo J Wade Harper Steven P Gygi

Cell 2015 Jul;162(2):425-440

Department of Cell Biology, Harvard Medical School, Boston, MA 02115, USA. Electronic address:

View Article

Download full-text PDF

 Source
http://dx.doi.org/10.1016/j.cell.2015.06.043DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4617211PMC
July 2015

QIL1 is a novel mitochondrial protein required for MICOS complex stability and cristae morphology.

Authors:
Virginia Guarani Elizabeth M McNeill Joao A Paulo Edward L Huttlin Florian Fröhlich Steven P Gygi David Van Vactor J Wade Harper

Elife 2015 May 21;4. Epub 2015 May 21.

Department of Cell Biology, Harvard Medical School, Boston, United States.

View Article

Download full-text PDF

 Source
https://elifesciences.org/articles/06265
Publisher Site
http://dx.doi.org/10.7554/eLife.06265DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4439739PMC
May 2015

MultiNotch MS3 enables accurate, sensitive, and multiplexed detection of differential expression across cancer cell line proteomes.

Authors:
Graeme C McAlister David P Nusinow Mark P Jedrychowski Martin Wühr Edward L Huttlin Brian K Erickson Ramin Rad Wilhelm Haas Steven P Gygi

Anal Chem 2014 Jul 3;86(14):7150-8. Epub 2014 Jul 3.

Harvard Medical School, Department of Cell Biology , Boston, Massachusetts 02115, United States.

View Article

Download full-text PDF

 Source
http://pubs.acs.org/doi/10.1021/ac502040v
Publisher Site
http://dx.doi.org/10.1021/ac502040vDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4215866PMC
July 2014

Quantitative temporal viromics: an approach to investigate host-pathogen interaction.

Authors:
Michael P Weekes Peter Tomasec Edward L Huttlin Ceri A Fielding David Nusinow Richard J Stanton Eddie C Y Wang Rebecca Aicheler Isa Murrell Gavin W G Wilkinson Paul J Lehner Steven P Gygi

Cell 2014 Jun;157(6):1460-72

Department of Cell Biology, Harvard Medical School, 240 Longwood Avenue, Boston, MA 02115, USA. Electronic address:

View Article

Download full-text PDF

 Source
http://dx.doi.org/10.1016/j.cell.2014.04.028DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4048463PMC
June 2014

TIMMDC1/C3orf1 functions as a membrane-embedded mitochondrial complex I assembly factor through association with the MCIA complex.

Authors:
Virginia Guarani Joao Paulo Bo Zhai Edward L Huttlin Steven P Gygi J Wade Harper

Mol Cell Biol 2014 Mar 16;34(5):847-61. Epub 2013 Dec 16.

Department of Cell Biology, Harvard Medical School, Boston, Massachusetts, USA.

View Article

Download full-text PDF

 Source
http://mcb.asm.org/lookup/doi/10.1128/MCB.01551-13
Publisher Site
http://dx.doi.org/10.1128/MCB.01551-13DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4023825PMC
March 2014

Proteomic analysis of cap-dependent translation identifies LARP1 as a key regulator of 5'TOP mRNA translation.

Authors:
Joseph Tcherkezian Marie Cargnello Yves Romeo Edward L Huttlin Genevieve Lavoie Steven P Gygi Philippe P Roux

Genes Dev 2014 Feb;28(4):357-71

Institute for Research in Immunology and Cancer (IRIC), Université de Montréal, Montreal, Quebec H3C 3J7, Canada;

View Article

Download full-text PDF

 Source
http://dx.doi.org/10.1101/gad.231407.113DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3937514PMC
February 2014

Global analysis of protein expression and phosphorylation of three stages of Plasmodium falciparum intraerythrocytic development.

Authors:
Brittany N Pease Edward L Huttlin Mark P Jedrychowski Eric Talevich John Harmon Timothy Dillman Natarajan Kannan Christian Doerig Ratna Chakrabarti Steven P Gygi Debopam Chakrabarti

J Proteome Res 2013 Sep 26;12(9):4028-45. Epub 2013 Aug 26.

Burnett School of Biomedical Sciences, University of Central Florida, Orlando, Florida 32826, United States.

View Article

Download full-text PDF

 Source
http://dx.doi.org/10.1021/pr400394gDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5292867PMC
September 2013

Candidate serum biomarkers for early intestinal cancer using 15N metabolic labeling and quantitative proteomics in the ApcMin/+ mouse.

Authors:
Melanie M Ivancic Edward L Huttlin Xiaodi Chen Jennifer K Pleiman Amy A Irving Adrian D Hegeman William F Dove Michael R Sussman

J Proteome Res 2013 Sep 8;12(9):4152-66. Epub 2013 Aug 8.

Department of Biochemistry, University of Wisconsin-Madison, Madison, Wisconsin 53706, United States.

View Article

Download full-text PDF

 Source
http://dx.doi.org/10.1021/pr400467cDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3792563PMC
September 2013

Gab2 phosphorylation by RSK inhibits Shp2 recruitment and cell motility.

Authors:
Xiaocui Zhang Genevieve Lavoie Loic Fort Edward L Huttlin Joseph Tcherkezian Jacob A Galan Haihua Gu Steven P Gygi Sebastien Carreno Philippe P Roux

Mol Cell Biol 2013 Apr 11;33(8):1657-70. Epub 2013 Feb 11.

Institute for Research in Immunology and Cancer, Université de Montréal, Montreal, Quebec, Canada.

View Article

Download full-text PDF

 Source
http://dx.doi.org/10.1128/MCB.01353-12DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3624252PMC
April 2013

Landscape of the PARKIN-dependent ubiquitylome in response to mitochondrial depolarization.

Authors:
Shireen A Sarraf Malavika Raman Virginia Guarani-Pereira Mathew E Sowa Edward L Huttlin Steven P Gygi J Wade Harper

Nature 2013 Apr 17;496(7445):372-6. Epub 2013 Mar 17.

Department of Cell Biology, Harvard Medical School, 240 Longwood Avenue, Boston, Massachusetts 02115, USA.

View Article

Download full-text PDF

 Source
http://dx.doi.org/10.1038/nature12043DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3641819PMC
April 2013

Phosphorylation of the eukaryotic translation initiation factor 4E-transporter (4E-T) by c-Jun N-terminal kinase promotes stress-dependent P-body assembly.

Authors:
Marie Cargnello Joseph Tcherkezian Jonas F Dorn Edward L Huttlin Paul S Maddox Steven P Gygi Philippe P Roux

Mol Cell Biol 2012 Nov 10;32(22):4572-84. Epub 2012 Sep 10.

Institute for Research in Immunology and Cancer, Université de Montréal, Montreal, Quebec, Canada.

View Article

Download full-text PDF

 Source
http://dx.doi.org/10.1128/MCB.00544-12DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3486182PMC
November 2012

Increasing the multiplexing capacity of TMTs using reporter ion isotopologues with isobaric masses.

Authors:
Graeme C McAlister Edward L Huttlin Wilhelm Haas Lily Ting Mark P Jedrychowski John C Rogers Karsten Kuhn Ian Pike Robert A Grothe Justin D Blethrow Steven P Gygi

Anal Chem 2012 Sep 20;84(17):7469-78. Epub 2012 Aug 20.

Department of Cell Biology, Harvard Medical School, Boston, Massachusetts 02115, United States.

View Article

Download full-text PDF

 Source
http://dx.doi.org/10.1021/ac301572tDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3715028PMC
September 2012

Evaluation of HCD- and CID-type fragmentation within their respective detection platforms for murine phosphoproteomics.

Authors:
Mark P Jedrychowski Edward L Huttlin Wilhelm Haas Mathew E Sowa Ramin Rad Steven P Gygi

Mol Cell Proteomics 2011 Dec 13;10(12):M111.009910. Epub 2011 Sep 13.

Department of Cell Biology, Harvard Medical School, Boston, MA 02115, USA.

View Article

Download full-text PDF

 Source
http://dx.doi.org/10.1074/mcp.M111.009910DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3237076PMC
December 2011

Systematic and quantitative assessment of the ubiquitin-modified proteome.

Authors:
Woong Kim Eric J Bennett Edward L Huttlin Ailan Guo Jing Li Anthony Possemato Mathew E Sowa Ramin Rad John Rush Michael J Comb J Wade Harper Steven P Gygi

Mol Cell 2011 Oct 8;44(2):325-40. Epub 2011 Sep 8.

Department of Cell Biology, Harvard Medical School, Boston, MA, USA.

View Article

Download full-text PDF

 Source
http://dx.doi.org/10.1016/j.molcel.2011.08.025DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3200427PMC
October 2011

Correct interpretation of comprehensive phosphorylation dynamics requires normalization by protein expression changes.

Authors:
Ronghu Wu Noah Dephoure Wilhelm Haas Edward L Huttlin Bo Zhai Mathew E Sowa Steven P Gygi

Mol Cell Proteomics 2011 Aug 7;10(8):M111.009654. Epub 2011 May 7.

Department of Cell Biology, Harvard Medical School, Boston, MA 02115, USA.

View Article

Download full-text PDF

 Source
http://dx.doi.org/10.1074/mcp.M111.009654DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3149096PMC
August 2011

A large-scale method to measure absolute protein phosphorylation stoichiometries.

Authors:
Ronghu Wu Wilhelm Haas Noah Dephoure Edward L Huttlin Bo Zhai Mathew E Sowa Steven P Gygi

Nat Methods 2011 Jul 3;8(8):677-83. Epub 2011 Jul 3.

Department of Cell Biology, Harvard Medical School, Boston, Massachusetts, USA.

View Article

Download full-text PDF

 Source
http://dx.doi.org/10.1038/nmeth.1636DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3146562PMC
July 2011

A tissue-specific atlas of mouse protein phosphorylation and expression.

Authors:
Edward L Huttlin Mark P Jedrychowski Joshua E Elias Tapasree Goswami Ramin Rad Sean A Beausoleil Judit Villén Wilhelm Haas Mathew E Sowa Steven P Gygi

Cell 2010 Dec;143(7):1174-89

Department of Cell Biology, Harvard Medical School, Boston, MA 02115, USA.

View Article

Download full-text PDF

 Source
http://dx.doi.org/10.1016/j.cell.2010.12.001DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3035969PMC
December 2010

Democratization and integration of genomic profiling tools.

Authors:
Michael R Sussman Edward L Huttlin Dana J Wohlbach

Methods Mol Biol 2009 ;553:373-93

Department of Biochemistry, UW Biotechnology Center, University of Wisconsin-Madison, Madison, WI, USA.

View Article

Download full-text PDF

 Source
http://link.springer.com/10.1007/978-1-60327-563-7_20
Publisher Site
http://dx.doi.org/10.1007/978-1-60327-563-7_20DOI Listing
January 2010

Discovery and validation of colonic tumor-associated proteins via metabolic labeling and stable isotopic dilution.

Authors:
Edward L Huttlin Xiaodi Chen Gregory A Barrett-Wilt Adrian D Hegeman Richard B Halberg Amy C Harms Michael A Newton William F Dove Michael R Sussman

Proc Natl Acad Sci U S A 2009 Oct 23;106(40):17235-40. Epub 2009 Sep 23.

Department of Biochemistry, University of Wisconsin, Madison, WI 53706, USA.

View Article

Download full-text PDF

 Source
http://dx.doi.org/10.1073/pnas.0909282106DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2761368PMC
October 2009

Matching isotopic distributions from metabolically labeled samples.

Authors:
Sean McIlwain David Page Edward L Huttlin Michael R Sussman

Bioinformatics 2008 Jul;24(13):i339-47

Department of Computer Sciences, University of Wisconsin, Madison, WI, USA.

View Article

Download full-text PDF

 Source
http://dx.doi.org/10.1093/bioinformatics/btn190DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2718665PMC
July 2008

Whole-genome expression profiling of the marine diatom Thalassiosira pseudonana identifies genes involved in silicon bioprocesses.

Authors:
Thomas Mock Manoj Pratim Samanta Vaughn Iverson Chris Berthiaume Matthew Robison Karie Holtermann Colleen Durkin Sandra Splinter Bondurant Kathryn Richmond Matthew Rodesch Toivo Kallas Edward L Huttlin Francesco Cerrina Michael R Sussman E Virginia Armbrust

Proc Natl Acad Sci U S A 2008 Feb 22;105(5):1579-84. Epub 2008 Jan 22.

School of Oceanography, University of Washington, Box 357940, Seattle, WA 98195, USA.

View Article

Download full-text PDF

 Source
http://dx.doi.org/10.1073/pnas.0707946105DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2234187PMC
February 2008

Stable isotope assisted assignment of elemental compositions for metabolomics.

Authors:
Adrian D Hegeman Christopher F Schulte Qiu Cui Ian A Lewis Edward L Huttlin Hamid Eghbalnia Amy C Harms Eldon L Ulrich John L Markley Michael R Sussman

Anal Chem 2007 Sep 21;79(18):6912-21. Epub 2007 Aug 21.

Department of Biochemistry, University of Wisconsin, 433 Babcock Drive, Madison, Wisconsin 53706, USA.

View Article

Download full-text PDF

 Source
http://dx.doi.org/10.1021/ac070346tDOI Listing
September 2007

Using dynamic programming to create isotopic distribution maps from mass spectra.

Authors:
Sean McIlwain David Page Edward L Huttlin Michael R Sussman

Bioinformatics 2007 Jul;23(13):i328-36

Department of Computer Sciences, University of Wisconsin, Madison, WI, USA.

View Article

Download full-text PDF

 Source
http://bioinformatics.cs.vt.edu/~murali/conference-fayfaars/
Web Search
https://academic.oup.com/bioinformatics/article-lookup/doi/1
Publisher Site
http://dx.doi.org/10.1093/bioinformatics/btm198DOI Listing
July 2007

Comparison of full versus partial metabolic labeling for quantitative proteomics analysis in Arabidopsis thaliana.

Authors:
Edward L Huttlin Adrian D Hegeman Amy C Harms Michael R Sussman

Mol Cell Proteomics 2007 May 9;6(5):860-81. Epub 2007 Feb 9.

Department of Biochemistry, University of Wisconsin, Madison, Wisconsin 53706, USA.

View Article

Download full-text PDF

 Source
http://www.mcponline.org/content/6/5/860.full.pdf
Web Search
http://www.mcponline.org/cgi/doi/10.1074/mcp.M600347-MCP200
Publisher Site
http://dx.doi.org/10.1074/mcp.M600347-MCP200DOI Listing
May 2007

Implications of 15N-metabolic labeling for automated peptide identification in Arabidopsis thaliana.

Authors:
Clark J Nelson Edward L Huttlin Adrian D Hegeman Amy C Harms Michael R Sussman

Proteomics 2007 Apr;7(8):1279-92

Department of Comparative Biosciences, University of Wisconsin, Madison, WI, USA.

View Article

Download full-text PDF

 Source
http://doi.wiley.com/10.1002/pmic.200600832
Publisher Site
http://dx.doi.org/10.1002/pmic.200600832DOI Listing
April 2007

Prediction of error associated with false-positive rate determination for peptide identification in large-scale proteomics experiments using a combined reverse and forward peptide sequence database strategy.

Authors:
Edward L Huttlin Adrian D Hegeman Amy C Harms Michael R Sussman

J Proteome Res 2007 Jan;6(1):392-8

Department of Biochemistry, University of Wisconsin, 433 Babcock Drive, Madison, Wisconsin 53706, USA.

View Article

Download full-text PDF

 Source
http://pubs.acs.org/doi/abs/10.1021/pr0603194
Publisher Site
http://dx.doi.org/10.1021/pr0603194DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2572755PMC
January 2007

A transcriptome-based characterization of habituation in plant tissue culture.

Authors:
Melissa S Pischke Edward L Huttlin Adrian D Hegeman Michael R Sussman

Plant Physiol 2006 Apr 17;140(4):1255-78. Epub 2006 Feb 17.

University of Wisconsin Biotechnology Center and Department of Biochemistry, Madison, Wisconsin 53706, USA.

View Article

Download full-text PDF

 Source
http://www.plantphysiol.org/cgi/doi/10.1104/pp.105.076059
Publisher Site
http://dx.doi.org/10.1104/pp.105.076059DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1435795PMC
April 2006