Dmitry Novikov

Dmitry Novikov

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Dmitry Novikov

Publications by authors named "Dmitry Novikov"

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Nonivasive quantification of axon radii using diffusion MRI.

Elife 2020 Feb 12;9. Epub 2020 Feb 12.

Champalimaud Research, Champalimaud Centre for the Unknown, Lisbon, Portugal.

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http://dx.doi.org/10.7554/eLife.49855DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7015669PMC
February 2020

Retrieving neuronal orientations using 3D scanning SAXS and comparison with diffusion MRI.

Neuroimage 2020 Jan 27;204:116214. Epub 2019 Sep 27.

Institute for Biomedical Engineering, ETH Zurich, Zurich, Switzerland; Institute of Pharmacology and Toxicology, University of Zurich, Zurich, Switzerland.

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http://dx.doi.org/10.1016/j.neuroimage.2019.116214DOI Listing
January 2020

Effect of intravoxel incoherent motion on diffusion parameters in normal brain.

Neuroimage 2020 Jan 30;204:116228. Epub 2019 Sep 30.

Center for Biomedical Imaging, Department of Radiology, New York University School of Medicine, New York, NY, USA. Electronic address:

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http://dx.doi.org/10.1016/j.neuroimage.2019.116228DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6886883PMC
January 2020

Hybrid-state free precession in nuclear magnetic resonance.

Commun Phys 2019 25;2. Epub 2019 Jun 25.

Department of Radiology, Center for Biomedical Imaging, New York University School of Medicine, New York, NY, USA.

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http://dx.doi.org/10.1038/s42005-019-0174-0DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6641569PMC
June 2019

Along-axon diameter variation and axonal orientation dispersion revealed with 3D electron microscopy: implications for quantifying brain white matter microstructure with histology and diffusion MRI.

Brain Struct Funct 2019 May 21;224(4):1469-1488. Epub 2019 Feb 21.

Department of Radiology, Center for Biomedical Imaging, New York University School of Medicine, 660 First Avenue, New York, NY, 10016, USA.

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http://dx.doi.org/10.1007/s00429-019-01844-6DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6510616PMC
May 2019

Quantifying brain microstructure with diffusion MRI: Theory and parameter estimation.

NMR Biomed 2019 04 15;32(4):e3998. Epub 2018 Oct 15.

Medical Physics, Department of Radiology, Faculty of Medicine, University of Freiburg, Freiburg, Germany.

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http://doi.wiley.com/10.1002/nbm.3998
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http://dx.doi.org/10.1002/nbm.3998DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6481929PMC
April 2019

On the scaling behavior of water diffusion in human brain white matter.

Neuroimage 2019 01 4;185:379-387. Epub 2018 Oct 4.

Bernard and Irene Schwartz Center for Biomedical Imaging, Department of Radiology, New York University School of Medicine, New York, NY, USA.

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http://dx.doi.org/10.1016/j.neuroimage.2018.09.075DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6388620PMC
January 2019

Evaluation of the accuracy and precision of the diffusion parameter EStImation with Gibbs and NoisE removal pipeline.

Neuroimage 2018 12 2;183:532-543. Epub 2018 Aug 2.

Center for Biomedical Imaging, Department of Radiology, New York University School of Medicine, NY, USA.

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http://dx.doi.org/10.1016/j.neuroimage.2018.07.066DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6371781PMC
December 2018

TE dependent Diffusion Imaging (TEdDI) distinguishes between compartmental T relaxation times.

Neuroimage 2018 11 19;182:360-369. Epub 2017 Sep 19.

Center for Biomedical Imaging, Department of Radiology, New York University School of Medicine, NY, USA.

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https://linkinghub.elsevier.com/retrieve/pii/S10538119173077
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http://dx.doi.org/10.1016/j.neuroimage.2017.09.030DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5858973PMC
November 2018

What dominates the time dependence of diffusion transverse to axons: Intra- or extra-axonal water?

Neuroimage 2018 11 16;182:500-510. Epub 2017 Dec 16.

Center for Biomedical Imaging, Department of Radiology, NYU School of Medicine, New York, NY 10016, United States.

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http://dx.doi.org/10.1016/j.neuroimage.2017.12.038DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6004237PMC
November 2018

Quantifying myofiber integrity using diffusion MRI and random permeable barrier modeling in skeletal muscle growth and Duchenne muscular dystrophy model in mice.

Magn Reson Med 2018 11 25;80(5):2094-2108. Epub 2018 Mar 25.

Center for Advanced Imaging Innovation and Research (CAI2R), New York University School of Medicine, New York, New York.

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http://dx.doi.org/10.1002/mrm.27188DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6107391PMC
November 2018

Transverse NMR relaxation in biological tissues.

Neuroimage 2018 11 7;182:149-168. Epub 2018 Jun 7.

Bernard and Irene Schwartz Center for Biomedical Imaging, Department of Radiology, New York University School of Medicine, New York, NY, USA.

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https://linkinghub.elsevier.com/retrieve/pii/S10538119183050
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http://dx.doi.org/10.1016/j.neuroimage.2018.06.002DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6175675PMC
November 2018

Characterization of prostate microstructure using water diffusion and NMR relaxation.

Front Phys 2018 Sep 25;6. Epub 2018 Sep 25.

Center for Biomedical Imaging, Department of Radiology, NYU School of Medicine, New York, NY, USA,

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https://www.frontiersin.org/article/10.3389/fphy.2018.00091/
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http://dx.doi.org/10.3389/fphy.2018.00091DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6296484PMC
September 2018

Heritability estimates on resting state fMRI data using ENIGMA analysis pipeline.

Pac Symp Biocomput 2018 ;23:307-318

Maryland Psychiatry Research Center, Department of Psychiatry, University of Maryland School of Medicine, Baltimore, MD, USA,

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5728672PMC
August 2018

Effects of mesoscopic susceptibility and transverse relaxation on diffusion NMR.

J Magn Reson 2018 08 29;293:134-144. Epub 2018 Jun 29.

Medical Physics, Department of Diagnostic Radiology, Medical Center - University of Freiburg, Faculty of Medicine, University of Freiburg, Germany.

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http://dx.doi.org/10.1016/j.jmr.2018.06.007DOI Listing
August 2018

Rotationally-invariant mapping of scalar and orientational metrics of neuronal microstructure with diffusion MRI.

Neuroimage 2018 07 12;174:518-538. Epub 2018 Mar 12.

Bernard and Irene Schwartz Center for Biomedical Imaging, Department of Radiology, New York University School of Medicine, New York, NY, USA.

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http://dx.doi.org/10.1016/j.neuroimage.2018.03.006DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5949281PMC
July 2018

On modeling.

Magn Reson Med 2018 06 1;79(6):3172-3193. Epub 2018 Mar 1.

CFIN/MINDLab, Department of Clinical Medicine, Aarhus University, Aarhus, Denmark.

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http://dx.doi.org/10.1002/mrm.27101DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5905348PMC
June 2018

SlyD-deficient Escherichia coli strains: A highway to contaminant-free protein extraction.

Biochem Biophys Res Commun 2018 05 10;499(4):967-972. Epub 2018 Apr 10.

Center of Molecular Biology and Biomedicine, Institute of Biology and Biomedicine, Lobachevsky State University, Nizhniy Novgorod, Russia.

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https://linkinghub.elsevier.com/retrieve/pii/S0006291X183079
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http://dx.doi.org/10.1016/j.bbrc.2018.04.029DOI Listing
May 2018

White Matter Tract Integrity: An Indicator of Axonal Pathology after Mild Traumatic Brain Injury.

J Neurotrauma 2018 04;35(8):1015-1020

1 Department of Radiology, Center for Advanced Imaging Innovation and Research, New York University School of Medicine , New York, New York.

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http://dx.doi.org/10.1089/neu.2017.5320DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5899287PMC
April 2018

Miniature pig model of human adolescent brain white matter development.

J Neurosci Methods 2018 02 24;296:99-108. Epub 2017 Dec 24.

U.S. Air Force School of Aerospace Medicine, Aeromedical Research Department, 2510 5th Street, Building 840, Wright-Patterson AFB, OH 45433-7913, United States; Department of Neurology, 59th Medical Wing, 2200 Bergquist Drive, Suite 1, Joint Base San Antonio-Lackland AFB, TX 78236, United States.

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http://dx.doi.org/10.1016/j.jneumeth.2017.12.017DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5817010PMC
February 2018

Working Memory And Brain Tissue Microstructure: White Matter Tract Integrity Based On Multi-Shell Diffusion MRI.

Sci Rep 2018 02 16;8(1):3175. Epub 2018 Feb 16.

Department of Radiology, Center for Advanced Imaging Innovation and Research (CAI2R), New York University School of Medicine, New York, NY, 10016, USA.

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http://dx.doi.org/10.1038/s41598-018-21428-4DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5816650PMC
February 2018

Observation of structural universality in disordered systems using bulk diffusion measurement.

Phys Rev E 2017 Dec 1;96(6-1):061101. Epub 2017 Dec 1.

Department of Physics, The Graduate Center, City University of New York, New York, New York 10016, USA.

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http://dx.doi.org/10.1103/PhysRevE.96.061101DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5777292PMC
December 2017

Lipid Metabolism, Abdominal Adiposity, and Cerebral Health in the Amish.

Obesity (Silver Spring) 2017 11 20;25(11):1876-1880. Epub 2017 Aug 20.

Maryland Psychiatric Research Center, Department of Psychiatry, University of Maryland School of Medicine, Baltimore, Maryland, USA.

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http://dx.doi.org/10.1002/oby.21946DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5667552PMC
November 2017

Time-Dependent Diffusion in Prostate Cancer.

Invest Radiol 2017 07;52(7):405-411

From the *Center for Biomedical Imaging, Department of Radiology, and †Sackler Institute of Graduate Biomedical Sciences, New York University School of Medicine; and ‡Division of Urologic Oncology, New York University Langone Medical Center, New York, NY.

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http://dx.doi.org/10.1097/RLI.0000000000000356DOI Listing
July 2017

Validation of surface-to-volume ratio measurements derived from oscillating gradient spin echo on a clinical scanner using anisotropic fiber phantoms.

NMR Biomed 2017 May 22;30(5). Epub 2017 Mar 22.

Center for Biomedical Imaging, Department of Radiology, NYU School of Medicine, New York, New York, USA.

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http://dx.doi.org/10.1002/nbm.3708DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5501714PMC
May 2017

In vivo measurement of membrane permeability and myofiber size in human muscle using time-dependent diffusion tensor imaging and the random permeable barrier model.

NMR Biomed 2017 Mar 7;30(3). Epub 2016 Oct 7.

Center for Biomedical Imaging, Department of Radiology, New York University School of Medicine, New York, New York, USA.

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http://dx.doi.org/10.1002/nbm.3612DOI Listing
March 2017

Diffusion MRI noise mapping using random matrix theory.

Magn Reson Med 2016 11 24;76(5):1582-1593. Epub 2015 Nov 24.

Center for Biomedical Imaging, Department of Radiology, New York University School of Medicine, New York, NY, USA.

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http://dx.doi.org/10.1002/mrm.26059DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4879661PMC
November 2016

Denoising of diffusion MRI using random matrix theory.

Neuroimage 2016 Nov 11;142:394-406. Epub 2016 Aug 11.

Center for Biomedical Imaging, Department of Radiology, New York University School of Medicine, NY, USA.

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http://dx.doi.org/10.1016/j.neuroimage.2016.08.016DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5159209PMC
November 2016

Gibbs ringing in diffusion MRI.

Magn Reson Med 2016 07 10;76(1):301-14. Epub 2015 Aug 10.

Center for Biomedical Imaging, Department of Radiology, New York University School of Medicine, New York, USA.

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http://dx.doi.org/10.1002/mrm.25866DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4915073PMC
July 2016

In vivo observation and biophysical interpretation of time-dependent diffusion in human white matter.

Neuroimage 2016 Apr 20;129:414-427. Epub 2016 Jan 20.

Bernard and Irene Schwartz Center for Biomedical Imaging, Department of Radiology, New York University School of Medicine, New York, NY 10016, USA.

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http://dx.doi.org/10.1016/j.neuroimage.2016.01.018DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4803645PMC
April 2016

Degeneracy in model parameter estimation for multi-compartmental diffusion in neuronal tissue.

NMR Biomed 2016 Jan 29;29(1):33-47. Epub 2015 Nov 29.

Center for Biomedical Imaging, Department of Radiology, New York University School of Medicine, New York, NY, USA.

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http://dx.doi.org/10.1002/nbm.3450DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4920129PMC
January 2016

N-acetyl-aspartate levels correlate with intra-axonal compartment parameters from diffusion MRI.

Neuroimage 2015 Sep 30;118:334-43. Epub 2015 May 30.

Center for Biomedical Imaging, Department of Radiology, New York University School of Medicine, New York, NY, USA. Electronic address:

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http://dx.doi.org/10.1016/j.neuroimage.2015.05.061DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4651014PMC
September 2015

Mesoscopic structure of neuronal tracts from time-dependent diffusion.

Neuroimage 2015 Jul 30;114:18-37. Epub 2015 Mar 30.

Bernard and Irene Schwartz Center for Biomedical Imaging, Department of Radiology, New York University School of Medicine, New York, NY 10016, USA. Electronic address:

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http://dx.doi.org/10.1016/j.neuroimage.2015.03.061DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4446209PMC
July 2015

One diffusion acquisition and different white matter models: how does microstructure change in human early development based on WMTI and NODDI?

Neuroimage 2015 Feb 9;107:242-256. Epub 2014 Dec 9.

Center for Biomedical Imaging, Department of Radiology, New York University Langone Medical Center, New York, NY, USA.

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http://dx.doi.org/10.1016/j.neuroimage.2014.12.009DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4300243PMC
February 2015

Revealing mesoscopic structural universality with diffusion.

Proc Natl Acad Sci U S A 2014 Apr 24;111(14):5088-93. Epub 2014 Mar 24.

Bernard and Irene Schwartz Center for Biomedical Imaging, Department of Radiology, New York University School of Medicine, New York, NY 10016.

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http://dx.doi.org/10.1073/pnas.1316944111DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3986157PMC
April 2014

The presence and role of iron in mild traumatic brain injury: an imaging perspective.

J Neurotrauma 2014 Feb 9;31(4):301-7. Epub 2014 Jan 9.

Department of Radiology, NYU Langone Medical Center , New York, New York.

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http://dx.doi.org/10.1089/neu.2013.3102DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3922137PMC
February 2014

Comment on "Magnetic resonance imaging by synergistic diffusion-diffraction patterns".

Phys Rev Lett 2013 Mar 8;110(10):109801. Epub 2013 Mar 8.

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http://dx.doi.org/10.1103/PhysRevLett.110.109801DOI Listing
March 2013

Non-invasive, in vivo monitoring of neuronal transport impairment in a mouse model of tauopathy using MEMRI.

Neuroimage 2013 Jan 31;64:693-702. Epub 2012 Aug 31.

The Bernard & Irene Schwartz Center for Biomedical Imaging, Department of Radiology, New York University Langone Medical Center, New York, NY 10016, USA.

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https://linkinghub.elsevier.com/retrieve/pii/S10538119120087
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http://dx.doi.org/10.1016/j.neuroimage.2012.08.065DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3677525PMC
January 2013

Random walk with barriers.

Nat Phys 2011 Jun;7(6):508-514

Center for Biomedical Imaging, Department of Radiology, New York University School of Medicine, New York, NY 10016, USA.

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http://dx.doi.org/10.1038/nphys1936DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3114643PMC
June 2011

Collective fluorescence enhancement in nanoparticle clusters.

Nat Commun 2011 Jun 21;2:364. Epub 2011 Jun 21.

Department of Physics and Astronomy, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.

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http://dx.doi.org/10.1038/ncomms1357DOI Listing
June 2011

Surface-to-volume ratio with oscillating gradients.

J Magn Reson 2011 May 16;210(1):141-5. Epub 2011 Feb 16.

Center for Biomedical Imaging, New York University School of Medicine, New York, NY 10016, USA.

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http://linkinghub.elsevier.com/retrieve/pii/S109078071100072
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http://dx.doi.org/10.1016/j.jmr.2011.02.011DOI Listing
May 2011

Monte Carlo study of a two-compartment exchange model of diffusion.

NMR Biomed 2010 Aug;23(7):711-24

Center for Biomedical Imaging, Department of Radiology, New York University School of Medicine, New York, NY 10016, USA.

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http://dx.doi.org/10.1002/nbm.1577DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2997614PMC
August 2010

Effective medium theory of a diffusion-weighted signal.

NMR Biomed 2010 Aug;23(7):682-97

Center for Biomedical Imaging, Department of Radiology, New York University School of Medicine, New York, NY 10016, USA.

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http://dx.doi.org/10.1002/nbm.1584DOI Listing
August 2010

Mott insulating state in ultraclean carbon nanotubes.

Science 2009 Jan;323(5910):106-10

Applied Physics, California Institute of Technology, Mail Stop 128-95, Pasadena, CA 91125, USA.

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http://dx.doi.org/10.1126/science.1165799DOI Listing
January 2009

Blinking statistics correlated with nanoparticle number.

Nano Lett 2008 Nov 10;8(11):4020-6. Epub 2008 Oct 10.

Department of Physics and Astronomy, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.

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http://dx.doi.org/10.1021/nl802696fDOI Listing
November 2008

Novel variant of tickborne encephalitis virus, Russia.

Emerg Infect Dis 2007 Oct;13(10):1574-8

State Research Center of Virology and Biotechnology VECTOR, Koltsovo, Novosibirsk Region, Russia.

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http://wwwnc.cdc.gov/eid/article/13/10/07-0158_article.htm
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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2851496PMC
http://dx.doi.org/10.3201/eid1310.070158DOI Listing
October 2007

Devil's staircase of incompressible electron states in a nanotube.

Authors:
Dmitry S Novikov

Phys Rev Lett 2005 Aug 1;95(6):066401. Epub 2005 Aug 1.

Department of Electrical Engineering, Princeton University, Princeton, New Jersey 08544, USA.

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http://dx.doi.org/10.1103/PhysRevLett.95.066401DOI Listing
August 2005

The 1.3 A crystal structure of human mitochondrial Delta3-Delta2-enoyl-CoA isomerase shows a novel mode of binding for the fatty acyl group.

J Mol Biol 2004 Sep;342(4):1197-208

Biocenter Oulu and Department of Biochemistry, University of Oulu, PO Box 3000, FIN-90014 University of Oulu, Finland.

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http://dx.doi.org/10.1016/j.jmb.2004.07.039DOI Listing
September 2004

Hypercholesterolemia is a prerequisite for puromycin inducible damage in mouse kidney.

Kidney Int 2003 Jan;63(1):107-12

Department of Bacteriology and Immunology, University of Helsinki and University Central Hospital, Helsinki, Finland.

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http://dx.doi.org/10.1046/j.1523-1755.2003.00726.xDOI Listing
January 2003

Transverse NMR relaxation as a probe of mesoscopic structure.

Phys Rev Lett 2002 Dec 20;89(27):278101. Epub 2002 Dec 20.

Section of Medical Physics, University Hospital Freiburg, D79106 Freiburg, Germany.

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http://dx.doi.org/10.1103/PhysRevLett.89.278101DOI Listing
December 2002

Podocyte-associated molecules in puromycin aminonucleoside nephrosis of the rat.

Lab Invest 2002 Jun;82(6):713-8

Haartman Institute, Department of Bacteriology and Immunology, University of Helsinki, Finland.

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http://dx.doi.org/10.1097/01.lab.0000017168.26718.16DOI Listing
June 2002

The role of alpha-methylacyl-CoA racemase in bile acid synthesis.

Biochem J 2002 May;363(Pt 3):801-7

Department of Chemistry, Southwest Missouri State University, Springfield, MO 65804, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1222534PMC
http://dx.doi.org/10.1042/0264-6021:3630801DOI Listing
May 2002