Dmitry A Stetsenko

Dmitry A Stetsenko

UNVERIFIED PROFILE

Are you Dmitry A Stetsenko?   Register this Author

Register author
Dmitry A Stetsenko

Dmitry A Stetsenko

Publications by authors named "Dmitry A Stetsenko"

Are you Dmitry A Stetsenko?   Register this Author

38Publications

473Reads

6Profile Views

Data for isolation and properties analysis of diastereomers of a mono-substituted phosphoryl guanidine trideoxyribonucleotide.

Data Brief 2019 Aug 20;25:104148. Epub 2019 Jun 20.

Institute of Chemical Biology and Fundamental Medicine, SB RAS, 8 Lavrentiev Avenue, Novosibirsk, 630090, Russia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.dib.2019.104148DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6609727PMC
August 2019

Diastereomers of a mono-substituted phosphoryl guanidine trideoxyribonucleotide: Isolation and properties.

Biochem Biophys Res Commun 2019 Jun 15;513(4):807-811. Epub 2019 Apr 15.

Institute of Chemical Biology and Fundamental Medicine, SB RAS, 8 Lavrentiev Avenue, Novosibirsk, 630090, Russia; Novosibirsk State University, 2 Pirogova St., Novosibirsk, 630090, Russia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.bbrc.2019.04.024DOI Listing
June 2019

Neutral and Negatively Charged Phosphate Modifications Altering Thermal Stability, Kinetics of Formation and Monovalent Ion Dependence of DNA G-Quadruplexes.

Chem Asian J 2019 Apr 24;14(8):1212-1220. Epub 2019 Jan 24.

Institute of Fundamental Sciences, Massey University, Private Bag 11-222, 4442, Palmerston North, New Zealand.

View Article

Download full-text PDF

Source
http://doi.wiley.com/10.1002/asia.201801757
Publisher Site
http://dx.doi.org/10.1002/asia.201801757DOI Listing
April 2019

Data set on the synthesis and properties of 2',3'-dideoxyuridine triphosphate conjugated to SiO nanoparticles.

Data Brief 2018 Dec 4;21:540-547. Epub 2018 Oct 4.

Institute of Chemical Biology and Fundamental Medicine, SB RAS, 8 Lavrentiev Avenue, Novosibirsk 630090, Russia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.dib.2018.09.127DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6199781PMC
December 2018

2',3'-Dideoxyuridine triphosphate conjugated to SiO nanoparticles: Synthesis and evaluation of antiproliferative activity.

Bioorg Med Chem Lett 2018 04 7;28(7):1248-1251. Epub 2018 Feb 7.

Institute of Chemical Biology and Fundamental Medicine, Siberian Branch of the Russian Academy of Sciences, 8 Lavrentiev Avenue, Novosibirsk 630090, Russia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.bmcl.2018.02.007DOI Listing
April 2018

Delivery of therapeutic RNA-cleaving oligodeoxyribonucleotides (deoxyribozymes): from cell culture studies to clinical trials.

Expert Opin Drug Deliv 2017 09 7;14(9):1077-1089. Epub 2016 Dec 7.

a Institute of Chemical Biology and Fundamental Medicine , Siberian Branch of the Russian Academy of Sciences , Novosibirsk , Russia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1080/17425247.2017.1266326DOI Listing
September 2017

Pre-steady state kinetics of DNA binding and abasic site hydrolysis by tyrosyl-DNA phosphodiesterase 1.

J Biomol Struct Dyn 2017 Aug 16;35(11):2314-2327. Epub 2016 Aug 16.

a Institute of Chemical Biology and Fundamental Medicine , Siberian Branch of the Russian Academy of Sciences , Novosibirsk 630090 , Russia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1080/07391102.2016.1220331DOI Listing
August 2017

Silencing of BCR/ABL Chimeric Gene in Human Chronic Myelogenous Leukemia Cell Line K562 by siRNA-Nuclear Export Signal Peptide Conjugates.

Nucleic Acid Ther 2017 Jun 29;27(3):168-175. Epub 2017 Mar 29.

1 Department of Biological and Environmental Chemistry, School of Humanity Oriented Science and Technology, Kindai University , Iizuka, Japan .

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1089/nat.2016.0647DOI Listing
June 2017

Conjugates of phosphorylated zalcitabine and lamivudine with SiO nanoparticles: Synthesis by CuAAC click chemistry and preliminary assessment of anti-HIV and antiproliferative activity.

Bioorg Med Chem 2017 03 25;25(5):1696-1702. Epub 2017 Jan 25.

Institute of Chemical Biology and Fundamental Medicine, Siberian Branch of the Russian Academy of Sciences, 8 Lavrentiev Avenue, Novosibirsk 630090, Russia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.bmc.2017.01.038DOI Listing
March 2017

New oligonucleotide derivatives as unreactive substrate analogues and potential inhibitors of human apurinic/apyrimidinic endonuclease APE1.

Mol Biosyst 2016 Jan;12(1):67-75

Institute of Chemical Biology and Fundamental Medicine, Siberian Branch of the Russian Academy of Sciences, Novosibirsk 630090, Russia. and Department of Natural Sciences, Novosibirsk State University, Novosibirsk 630090, Russia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1039/c5mb00692aDOI Listing
January 2016

Design of a New Fluorescent Oligonucleotide-Based Assay for a Highly Specific Real-Time Detection of Apurinic/Apyrimidinic Site Cleavage by Tyrosyl-DNA Phosphodiesterase 1.

Bioconjug Chem 2015 Oct 10;26(10):2046-53. Epub 2015 Sep 10.

Institute of Chemical Biology and Fundamental Medicine, Siberian Branch of the Russian Academy of Sciences , 8 Lavrentiev Avenue, Novosibirsk 630090, Russia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1021/acs.bioconjchem.5b00451DOI Listing
October 2015

DNA enzymes as potential therapeutics: towards clinical application of 10-23 DNAzymes.

Expert Opin Biol Ther 2015 May 14;15(5):689-711. Epub 2015 Mar 14.

Institute of Chemical Biology and Fundamental Medicine, Siberian Branch of the Russian Academy of Sciences , 8 Lavrentiev Avenue, Novosibirsk 630090 , Russia

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1517/14712598.2015.1025048DOI Listing
May 2015

Efficient functionalization of oligonucleotides by new achiral nonnucleosidic monomers.

Org Lett 2014 Jun 12;16(11):2842-5. Epub 2014 May 12.

Institute of Chemical Biology and Fundamental Medicine, Siberian Branch of the Russian Academy of Sciences , 8 Lavrentiev Avenue, Novosibirsk 630090, Russia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1021/ol500668nDOI Listing
June 2014

Oligonucleotide functionalization by a novel alkyne-modified nonnucleosidic reagent obtained by versatile building block chemistry.

Nucleosides Nucleotides Nucleic Acids 2013 ;32(6):306-19

Institute of Chemical Biology and Fundamental Medicine, Siberian Branch of the Russian Academy of Sciences, Novosibirsk, Russia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1080/15257770.2013.787147DOI Listing
October 2013

New TFA-free cleavage and final deprotection in fmoc solid-phase peptide synthesis: dilute HCl in fluoro alcohol.

Org Lett 2012 Dec 4;14(24):6346-9. Epub 2012 Dec 4.

Department of Chemistry, University of Reading, P.O. Box 224, Whiteknights, Reading RG6 6AD, UK.

View Article

Download full-text PDF

Source
http://pubs.acs.org/doi/10.1021/ol303124r
Publisher Site
http://dx.doi.org/10.1021/ol303124rDOI Listing
December 2012

Using chemical approaches to understand RNA structure and function in biology.

J Nucleic Acids 2012 16;2012:972575. Epub 2012 Feb 16.

Department of Bioengineering, Imperial College London, South Kensington Campus, London SW7 2AZ, UK.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1155/2012/972575DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3306900PMC
August 2012

DNA or RNA oligonucleotide 2'-hydrazides for chemoselective click-type ligation with carbonyl compounds.

Nucleosides Nucleotides Nucleic Acids 2011 Jul-Aug;30(7-8):577-84

Department of Chemistry, A. N. Belozersky Institute of Physico-Chemical Biology, M. V. Lomonossov Moscow State University, Leninskie Gory, Moscow, Russia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1080/15257770.2011.586010DOI Listing
December 2011

Synthesis of new non-nucleosidic ligand building blocks for solid-phase oligonucleotide assembly.

Nucleic Acids Symp Ser (Oxf) 2008 (52):719-20

Division of Chemical Sciences, Faculty of Health and Medical Sciences, University of Surrey, Guildford, Surrey GU2 7XH, UK.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/nass/nrn363DOI Listing
November 2010

A convenient solid-phase method for the synthesis of novel oligonucleotide-folate conjugates.

Nucleosides Nucleotides Nucleic Acids 2007 ;26(10-12):1273-6

Department of Chemistry and A. N. Belozersky Institute of Physico-Chemical Biology, M. V. Lomonossov Moscow State University, Moscow, Russia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1080/15257770701530459DOI Listing
March 2008

Preparation of 2'-hydrazino oligonucleotides and their reaction with aldehydes and 1,3-diketones.

Nucleosides Nucleotides Nucleic Acids 2007 ;26(6-7):795-8

Department of Chemistry and A. N. Belozersky Institute of Physico-Chemical Biology, M. V. Lomonossov Moscow State University, Moscow, Russia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1080/15257770701501625DOI Listing
February 2008

Novel method for the synthesis of 2' -phosphorylated oligonucleotides.

Nucleosides Nucleotides Nucleic Acids 2007 ;26(6-7):821-5

Institute of Chemical Biology and Fundamental Medicine, Siberian Branch of Russian Academy of Sciences, Novosibirsk, Russia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1080/15257770701503803DOI Listing
February 2008

2'-Hydrazine oligonucleotides: synthesis and efficient conjugation with aldehydes.

Nucleic Acids Symp Ser (Oxf) 2005 (49):133-4

Department of Chemistry, M. V. Lomonossov Moscow State University, 1 Leninskie gory, Moscow 119992, Russia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/nass/49.1.133DOI Listing
June 2007

Incorporation of side-chain groups of basic amino acids into oligonucleotides via the 2'-position of uridine.

Nucleic Acids Symp Ser (Oxf) 2005 (49):347-8

Chemistry Department, M. V. Lomonossov Moscow State University, 1 Leninskie Gory, Moscow 119992, Russia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/nass/49.1.347DOI Listing
June 2007

Antiviral activity of steric-block oligonucleotides targeting the HIV-1 trans-activation response and packaging signal stem-loop RNAs.

Nucleosides Nucleotides Nucleic Acids 2005 ;24(5-7):393-6

Department of Medicine, University of Cambridge, Addenbrooke's Hospital, Hills Road, Cambridge CB2 2QQ. UK.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1081/ncn-200059813DOI Listing
December 2005

Use of carbonyl group addition--elimination reactions for synthesis of nucleic acid conjugates.

Bioconjug Chem 2005 May-Jun;16(3):471-89

Department of Chemistry, M. V. Lomonossov Moscow State University, 1 Leninskie Gory, Moscow 119992, Russia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1021/bc049712vDOI Listing
September 2005

Oligonucleotides containing 2'-O-[2-(2,3-dihydroxypropyl)amino-2-oxoethyl]uridine as suitable precursors of 2'-aldehyde oligonucleotides for chemoselective ligation.

Bioorg Med Chem 2005 Aug;13(16):4912-20

Department of Chemistry, M.V. Lomonossov Moscow State University, 1 Leninskie Gory, Moscow 119992, Russia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.bmc.2005.05.024DOI Listing
August 2005

Chemical methods for peptide-oligonucleotide conjugate synthesis.

Methods Mol Biol 2005 ;288:205-24

Laboratory of Molecular Biology, MRC, Cambridge, UK.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1385/1-59259-823-4:205DOI Listing
November 2004

Synthesis of oligonucleotide 2'-conjugates via amide bond formation in solution.

Bioorg Med Chem Lett 2004 Feb;14(3):801-4

Chemistry Department, M. V. Lomonossov Moscow State University, Leninskie Gory, Moscow 119992, Russia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.bmcl.2003.10.069DOI Listing
February 2004

Uridine 2'-carbamates: facile tools for oligonucleotide 2'-functionalization.

Curr Protoc Nucleic Acid Chem 2004 Feb;Chapter 4:Unit 4.21

Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Moscow, Russia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1002/0471142700.nc0421s15DOI Listing
February 2004

1,2-Diol and hydrazide phosphoramidites for solid-phase synthesis and chemoselective ligation of 2'-modified oligonucleotides.

Nucleosides Nucleotides Nucleic Acids 2003 May-Aug;22(5-8):1375-8

Chemistry Department and A.N. Belozersky Institute of Physico-Chemical Biology, M.V. Lomonosov Moscow State University, Moscow, Russia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1081/NCN-120022969DOI Listing
December 2003

Total stepwise solid-phase peptide-oligonucleotide conjugate synthesis on macroporous polystyrene.

Nucleosides Nucleotides Nucleic Acids 2003 May-Aug;22(5-8):1379-82

Medical Research Council, Laboratory of Molecular Biology, Cambridge, UK.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1081/NCN-120022970DOI Listing
December 2003

Pyrenemethyl ara-uridine-2'-carbamate: a strong interstrand excimer in the major groove of a DNA duplex.

Chembiochem 2003 Sep;4(9):841-7

Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Miklukho-Maklaya 16/10, 117997 Moscow, Russia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1002/cbic.200300678DOI Listing
September 2003

Synthesis of peptide-oligonucleotide conjugates with single and multiple peptides attached to 2'-aldehydes through thiazolidine, oxime, and hydrazine linkages.

Bioconjug Chem 2002 Jul-Aug;13(4):822-30

Chemistry Department and A. N. Belozersky Institute of Physico-Chemical Biology, M. V. Lomonosov Moscow State University, Moscow, 119899, Russia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1021/bc020016+DOI Listing
August 2003

Total stepwise solid-phase synthesis of oligonucleotide-(3'-->N)-peptide conjugates.

Org Lett 2002 Sep;4(19):3259-62

Medical Research Council, Laboratory of Molecular Biology, Cambridge CB2 2QH, UK.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1021/ol026502uDOI Listing
September 2002