Publications by authors named "Diane E Dickel"

37Publications

Loss of Extreme Long-Range Enhancers in Human Neural Crest Drives a Craniofacial Disorder.

Cell Stem Cell 2020 Nov 28;27(5):765-783.e14. Epub 2020 Sep 28.

Department of Chemical and Systems Biology, Stanford University School of Medicine, Stanford, CA 94305, USA; Department of Developmental Biology, Stanford University School of Medicine, Stanford, CA 94305, USA; Institute of Stem Cell Biology and Regenerative Medicine, Stanford University School of Medicine, Stanford, CA 94305, USA; Howard Hughes Medical Institute, Stanford University School of Medicine, Stanford, CA 94305, USA. Electronic address:

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.stem.2020.09.001DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7655526PMC
November 2020

Comprehensive In Vivo Interrogation Reveals Phenotypic Impact of Human Enhancer Variants.

Cell 2020 03 12;180(6):1262-1271.e15. Epub 2020 Mar 12.

Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA; U.S. Department of Energy Joint Genome Institute, Berkeley, CA 94720, USA; Comparative Biochemistry Program, University of California, Berkeley, CA 94720, USA. Electronic address:

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.cell.2020.02.031DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7179509PMC
March 2020

Genomic Resolution of DLX-Orchestrated Transcriptional Circuits Driving Development of Forebrain GABAergic Neurons.

Cell Rep 2019 08;28(8):2048-2063.e8

Nina Ireland Laboratory of Developmental Neurobiology, Department of Psychiatry, UCSF Weill Institute for Neurosciences, University of California, San Francisco, San Francisco, CA 94158, USA; Development and Stem Cell Biology Program, University of California, San Francisco, San Francisco, CA 94158, USA. Electronic address:

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.celrep.2019.07.022DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6750766PMC
August 2019

Molecular Mechanisms Driving Switch Behavior in Xylem Cell Differentiation.

Cell Rep 2019 07;28(2):342-351.e4

Department of Plant Biology and Genome Center, University of California, Davis, Davis, CA 95616, USA. Electronic address:

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.celrep.2019.06.041DOI Listing
July 2019

High-Throughput Single-Cell Transcriptome Profiling of Plant Cell Types.

Cell Rep 2019 05;27(7):2241-2247.e4

Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA. Electronic address:

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.celrep.2019.04.054DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6758921PMC
May 2019

Cardiac Reprogramming Factors Synergistically Activate Genome-wide Cardiogenic Stage-Specific Enhancers.

Cell Stem Cell 2019 07 9;25(1):69-86.e5. Epub 2019 May 9.

Department of Molecular Biology, the Hamon Center for Regenerative Science and Medicine, and Senator Paul D. Wellstone Muscular Dystrophy Cooperative Research Center, University of Texas Southwestern Medical Center, 5323 Harry Hines Boulevard, Dallas, TX 75390, USA. Electronic address:

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.stem.2019.03.022DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6754266PMC
July 2019

Parkinson-Associated SNCA Enhancer Variants Revealed by Open Chromatin in Mouse Dopamine Neurons.

Am J Hum Genet 2018 12 29;103(6):874-892. Epub 2018 Nov 29.

McKusick-Nathans Institute of Genetic Medicine, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA; Department of Molecular and Comparative Pathobiology, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA; Department of Medicine, Johns Hopkins University School of Medicine, Baltimore, MD 21287, USA. Electronic address:

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.ajhg.2018.10.018DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6288322PMC
December 2018

Ultraconserved Enhancers Are Required for Normal Development.

Cell 2018 01 18;172(3):491-499.e15. Epub 2018 Jan 18.

Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley, CA 94720, USA; U.S. Department of Energy Joint Genome Institute, Walnut Creek, CA 94598, USA; School of Natural Sciences, University of California Merced, Merced, CA 95343, USA. Electronic address:

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.cell.2017.12.017DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5786478PMC
January 2018

Genomic Patterns of De Novo Mutation in Simplex Autism.

Cell 2017 Oct 28;171(3):710-722.e12. Epub 2017 Sep 28.

Department of Genome Sciences, University of Washington School of Medicine, Seattle, WA 98195, USA; Howard Hughes Medical Institute, University of Washington, Seattle, WA 98195, USA. Electronic address:

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.cell.2017.08.047DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5679715PMC
October 2017

Improved regulatory element prediction based on tissue-specific local epigenomic signatures.

Proc Natl Acad Sci U S A 2017 02 13;114(9):E1633-E1640. Epub 2017 Feb 13.

Genomic Analysis Laboratory, The Salk Institute for Biological Studies, La Jolla, CA 92037;

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1073/pnas.1618353114DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5338528PMC
February 2017

The Ties That Bind: Mapping the Dynamic Enhancer-Promoter Interactome.

Cell 2016 11;167(5):1163-1166

MS 84-171, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA; U.S. Department of Energy Joint Genome Institute, Walnut Creek, CA 94598, USA; School of Natural Sciences, University of California, Merced, CA 95343, USA. Electronic address:

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.cell.2016.10.054DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5131802PMC
November 2016

Progressive Loss of Function in a Limb Enhancer during Snake Evolution.

Cell 2016 Oct;167(3):633-642.e11

MS 84-171, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA; U.S. Department of Energy Joint Genome Institute, Walnut Creek, CA 94598, USA; School of Natural Sciences, University of California, Merced, CA 95343, USA. Electronic address:

View Article

Download full-text PDF

Source
http://www.cell.com/cell/pdf/S0092-8674(16)31310-1.pdf
Web Search
http://www.cell.com/cms/attachment/2073022832/2068642346/mmc
Web Search
http://dx.doi.org/10.1016/j.cell.2016.09.028DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5484524PMC
October 2016

Fishing for Function in the Human Gene Pool.

Trends Genet 2016 07 21;32(7):392-394. Epub 2016 May 21.

Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA. Electronic address:

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.tig.2016.05.002DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4912909PMC
July 2016

Function-based identification of mammalian enhancers using site-specific integration.

Nat Methods 2014 May 23;11(5):566-71. Epub 2014 Mar 23.

1] Genomics Division, Lawrence Berkeley National Laboratory, Berkeley, California, USA. [2] US Department of Energy Joint Genome Institute, Walnut Creek, California, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1038/nmeth.2886DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4008384PMC
May 2014

Association studies of serotonin system candidate genes in early-onset obsessive-compulsive disorder.

Biol Psychiatry 2007 Feb;61(3):322-9

Institute of Juvenile Research, Department of Psychiatry, University of Illinois at Chicago, Chicago, Illinois, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.biopsych.2006.09.030DOI Listing
February 2007