Derek J Smith

Derek J Smith

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Derek J Smith

Derek J Smith

Publications by authors named "Derek J Smith"

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Interactions between nitrogen form, loading rate, and light intensity on Microcystis and Planktothrix growth and microcystin production.

Harmful Algae 2018 03 8;73:84-97. Epub 2018 Feb 8.

Department of Earth & Environmental Sciences, University of Michigan, 1100 N. University Ave, Ann Arbor, MI 48109-1005, USA.

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http://dx.doi.org/10.1016/j.hal.2018.02.001DOI Listing
March 2018

Antigenic Relationships among Human Pathogenic Orientia tsutsugamushi Isolates from Thailand.

PLoS Negl Trop Dis 2016 06 1;10(6):e0004723. Epub 2016 Jun 1.

Mahidol-Oxford Tropical Medicine Research Unit, Faculty of Tropical Medicine, Mahidol University, Bangkok, Thailand.

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http://dx.doi.org/10.1371/journal.pntd.0004723DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4889052PMC
June 2016

Influenza B vaccine lineage selection--an optimized trivalent vaccine.

Vaccine 2016 Mar 16;34(13):1617-1622. Epub 2016 Feb 16.

Department of Zoology, University of Cambridge, Cambridge, United Kingdom; Department of Virology, Erasmus MC, Rotterdam, The Netherlands. Electronic address:

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http://dx.doi.org/10.1016/j.vaccine.2016.01.042DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4793086PMC
March 2016

The confounded effects of age and exposure history in response to influenza vaccination.

Vaccine 2016 Jan 5;34(4):540-546. Epub 2015 Dec 5.

Centre for Pathogen Evolution, University of Cambridge, Department of Zoology, Downing Street, Cambridge CB2 3EJ, UK; World Health Organization Collaborating Center for Modeling, Evolution, and Control of Emerging Infectious Diseases, Cambridge CB2 3EJ, UK; Erasmus MC, Department of Viroscience, P.O. Box 2040, Ee1726, 3000 CA Rotterdam, The Netherlands. Electronic address:

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http://dx.doi.org/10.1016/j.vaccine.2015.11.058DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4724805PMC
January 2016

Integrating influenza antigenic dynamics with molecular evolution.

Elife 2014 4;3:e01914. Epub 2014 Feb 4.

Institute of Evolutionary Biology, University of Edinburgh, Edinburgh, United Kingdom.

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http://dx.doi.org/10.7554/eLife.01914DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3909918PMC
November 2015

Mapping Enterovirus A71 Antigenic Determinants from Viral Evolution.

J Virol 2015 Nov 2;89(22):11500-6. Epub 2015 Sep 2.

Center of Infectious Disease and Signaling Research, National Cheng Kung University, Tainan, Taiwan Department of Medical Laboratory Science and Biotechnology, National Cheng Kung University, Tainan, Taiwan National Institute of Infectious Diseases and Vaccinology, National Health Research Institutes, Tainan, Taiwan

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http://dx.doi.org/10.1128/JVI.02035-15DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4645677PMC
November 2015

Dengue viruses cluster antigenically but not as discrete serotypes.

Science 2015 Sep;349(6254):1338-43

Center for Pathogen Evolution, Department of Zoology, University of Cambridge, Downing Street, Cambridge CB2 3EJ, UK. World Health Organization (WHO) Collaborating Center for Modeling, Evolution, and Control of Emerging Infectious Diseases, Cambridge CB2 3EJ, UK. Department of Viroscience, Erasmus MC, Rotterdam 3015 GE, Netherlands.

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http://dx.doi.org/10.1126/science.aac5017DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4876809PMC
September 2015

A recommended numbering scheme for influenza A HA subtypes.

PLoS One 2014 12;9(11):e112302. Epub 2014 Nov 12.

Department of Zoology, University of Cambridge, Cambridge, United Kingdom.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0112302PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4229193PMC
July 2015

Circulating avian influenza viruses closely related to the 1918 virus have pandemic potential.

Cell Host Microbe 2014 Jun;15(6):692-705

Department of Pathobiological Sciences, School of Veterinary Medicine, University of Wisconsin-Madison, 575 Science Drive, Madison, WI 53711, USA; ERATO Infection-Induced Host Responses Project, Japan Science and Technology Agency, Saitama 332-0012, Japan; Division of Virology, Department of Microbiology and Immunology, Institute of Medical Science, University of Tokyo, Tokyo 108-8639, Japan; Department of Special Pathogens, International Research Center for Infectious Diseases, Institute of Medical Science, University of Tokyo, Minato-ku, Tokyo 108-8639, Japan. Electronic address:

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http://dx.doi.org/10.1016/j.chom.2014.05.006DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4205238PMC
June 2014

Unifying viral genetics and human transportation data to predict the global transmission dynamics of human influenza H3N2.

PLoS Pathog 2014 Feb 20;10(2):e1003932. Epub 2014 Feb 20.

Departments of Biomathematics and Human Genetics, David Geffen School of Medicine, University of California, Los Angeles, California, United States of America ; Department of Biostatistics, UCLA Fielding School of Public Health, University of California, Los Angeles, California, United States of America.

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http://dx.doi.org/10.1371/journal.ppat.1003932DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3930559PMC
February 2014

Cochrane re-arranged: support for policies to vaccinate elderly people against influenza.

Vaccine 2013 Dec 3;31(50):6030-3. Epub 2013 Oct 3.

Erasmus MC, Department of Viroscience, PB 2040, 3000 CA Rotterdam, The Netherlands.

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http://dx.doi.org/10.1016/j.vaccine.2013.09.063DOI Listing
December 2013

A review of influenza haemagglutinin receptor binding as it relates to pandemic properties.

Vaccine 2012 Jun;30(29):4369-76

Department of Zoology, University of Cambridge, Downing Street, Cambridge CB2 3EJ, United Kingdom.

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http://dx.doi.org/10.1016/j.vaccine.2012.02.076DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3372863PMC
June 2012

Ketamine-induced neuroapoptosis in the fetal and neonatal rhesus macaque brain.

Anesthesiology 2012 Feb;116(2):372-84

Department of Anesthesiology & Perioperative Medicine, Oregon Health & Science University, Portland, Oregon 97239-3098, USA.

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http://dx.doi.org/10.1097/ALN.0b013e318242b2cdDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3433282PMC
February 2012

Flavivirus-induced antibody cross-reactivity.

J Gen Virol 2011 Dec 7;92(Pt 12):2821-9. Epub 2011 Sep 7.

Wildlife Zoonoses and Vector-borne Diseases Research Group, Animal Health and Veterinary Laboratories Agency, Woodham Lane, New Haw, Addlestone, Surrey KT15 3NB, UK.

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http://dx.doi.org/10.1099/vir.0.031641-0DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3352572PMC
December 2011

Discordant antigenic drift of neuraminidase and hemagglutinin in H1N1 and H3N2 influenza viruses.

Proc Natl Acad Sci U S A 2011 Dec 5;108(51):20748-53. Epub 2011 Dec 5.

Division of Viral Products, Center for Biologics Evaluation and Research, Food and Drug Administration, Bethesda, MD 20892, USA.

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http://dx.doi.org/10.1073/pnas.1113801108DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3251064PMC
December 2011

Glucocorticoid receptor stimulation and the regulation of neonatal cerebellar neural progenitor cell apoptosis.

Neurobiol Dis 2011 Aug 20;43(2):356-63. Epub 2011 Apr 20.

Washington University in Saint Louis, School of Medicine, Department of Psychiatry, 660 South Euclid, Box #8134, Saint Louis, MO 63110, USA.

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http://dx.doi.org/10.1016/j.nbd.2011.04.004DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3114279PMC
August 2011

Evolution of re-emergent virus and its impact on enterovirus 71 epidemics.

Exp Biol Med (Maywood) 2011 Aug 29;236(8):899-908. Epub 2011 Jun 29.

The Institute of Basic Medical Sciences, National Cheng Kung University, Tainan 701, Taiwan.

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http://dx.doi.org/10.1258/ebm.2010.010233DOI Listing
August 2011

Why an A-loop phospho-mimetic fails to activate PAK1: understanding an inaccessible kinase state by molecular dynamics simulations.

Structure 2010 Jul;18(7):879-90

sGSK Group at IMCB, Astar Neuroscience Research Partnership, Proteos Building, 61 Biopolis Drive, Singapore 138673.

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http://dx.doi.org/10.1016/j.str.2010.04.011DOI Listing
July 2010

Isoflurane-induced neuroapoptosis in the neonatal rhesus macaque brain.

Anesthesiology 2010 Apr;112(4):834-41

Department of Anesthesiology and Perioperative Medicine, Oregon Health and Science University, Portland, Oregon 97239-3098, USA.

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http://anesthesiology.pubs.asahq.org/Article.aspx?doi=10.109
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http://dx.doi.org/10.1097/ALN.0b013e3181d049cdDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3962067PMC
April 2010

Use of antigenic cartography in vaccine seed strain selection.

Avian Dis 2010 Mar;54(1 Suppl):220-3

Department of Virology, Erasmus MC, Dr. Molewaterplein 50, 3015 GE Rotterdam, The Netherlands.

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http://dx.doi.org/10.1637/8740-032509-ResNote.1DOI Listing
March 2010

Reemergence of enterovirus 71 in 2008 in taiwan: dynamics of genetic and antigenic evolution from 1998 to 2008.

J Clin Microbiol 2009 Nov 23;47(11):3653-62. Epub 2009 Sep 23.

Department of Medical Laboratory Science and Biotechnology, National Cheng Kung University, One University Road, Tainan, 701, Taiwan.

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http://dx.doi.org/10.1128/JCM.00630-09DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2772620PMC
November 2009

Quantifying the impact of immune escape on transmission dynamics of influenza.

Science 2009 Oct;326(5953):726-8

Odum School of Ecology, University of Georgia, Athens, GA 30602, USA.

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http://dx.doi.org/10.1126/science.1175980DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3800096PMC
October 2009

High dose magnesium sulfate exposure induces apoptotic cell death in the developing neonatal mouse brain.

Neonatology 2009 10;96(1):23-32. Epub 2009 Feb 10.

Division of Emergency Medicine, Washington University School of Medicine, St. Louis, MO 63110, USA.

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http://dx.doi.org/10.1159/000201327DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3087884PMC
September 2009

Lithium protects against anesthesia-induced developmental neuroapoptosis.

Anesthesiology 2009 Apr;110(4):862-8

Department of Psychiatry, Washington University in St. Louis School of Medicine, St. Louis, Missouri 63110, USA.

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http://dx.doi.org/10.1097/ALN.0b013e31819b5eabDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2716053PMC
April 2009

An amino acid substitution in the influenza A virus hemagglutinin associated with escape from recognition by human virus-specific CD4+ T-cells.

Virus Res 2007 Jun 8;126(1-2):282-7. Epub 2007 Apr 8.

Department of Virology and Postgraduate School Molecular Medicine, Erasmus Medical Center, Rotterdam, The Netherlands.

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http://dx.doi.org/10.1016/j.virusres.2007.02.018DOI Listing
June 2007

The 1.8 A resolution structure of hydroxycinnamoyl-coenzyme A hydratase-lyase (HCHL) from Pseudomonas fluorescens, an enzyme that catalyses the transformation of feruloyl-coenzyme A to vanillin.

Acta Crystallogr D Biol Crystallogr 2006 Dec 23;62(Pt 12):1494-501. Epub 2006 Nov 23.

Structural Biology Laboratory, Department of Chemistry, University of York, Heslington, York YO10 5YW, England.

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http://dx.doi.org/10.1107/S0907444906039199DOI Listing
December 2006

The crystal structure of superoxide dismutase from Plasmodium falciparum.

BMC Struct Biol 2006 Oct 4;6:20. Epub 2006 Oct 4.

Structural Biology Laboratory, Department of Chemistry, University of York, York YO10 5YW, UK.

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http://dx.doi.org/10.1186/1472-6807-6-20DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1618392PMC
October 2006

Predictability and preparedness in influenza control.

Authors:
Derek J Smith

Science 2006 Apr;312(5772):392-4

Department of Zoology, University of Cambridge, Downing Street, Cambridge, CB2 3EJ, UK.

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http://dx.doi.org/10.1126/science.1122665DOI Listing
April 2006

Mutations, drift, and the influenza archipelago.

Discov Med 2004 Dec;4(24):371-7

Department of Zoology, University of Cambridge, Downing Street, Cambridge, CB2 3EJ, United Kingdom.

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December 2004

Mapping the antigenic and genetic evolution of influenza virus.

Science 2004 Jul 24;305(5682):371-6. Epub 2004 Jun 24.

Department of Zoology, University of Cambridge, Downing Street, Cambridge CB2 3EJ, UK.

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http://dx.doi.org/10.1126/science.1097211DOI Listing
July 2004

Preferential hydration and the exclusion of cosolvents from protein surfaces.

J Chem Phys 2004 Jul;121(2):1148-54

York Structural Biology Laboratory, Department of Chemistry, University of York, Heslington, York, North Yorkshire YO10 5YW, United Kingdom.

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http://dx.doi.org/10.1063/1.1759615DOI Listing
July 2004

Recognition of homo- and heterosubtypic variants of influenza A viruses by human CD8+ T lymphocytes.

J Immunol 2004 Feb;172(4):2453-60

Department of Virology and WHO National Influenza Center, Erasmus MC, Rotterdam, The Netherlands.

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http://dx.doi.org/10.4049/jimmunol.172.4.2453DOI Listing
February 2004

Mutations in the DNA mismatch repair proteins MutS and MutL of oxazolidinone-resistant or -susceptible Enterococcus faecium.

Antimicrob Agents Chemother 2003 Oct;47(10):3061-6

Diagnostic Laboratory for Infectious Diseases and Perinatal Screening, National Institute for Public Health and the Environment, Bilthoven, The Netherlands.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC201155PMC
http://dx.doi.org/10.1128/aac.47.10.3061-3066.2003DOI Listing
October 2003

Applications of bioinformatics and computational biology to influenza surveillance and vaccine strain selection.

Authors:
Derek J Smith

Vaccine 2003 May;21(16):1758-61

Department of Zoology, University of Cambridge, Downing Street, CB2 3EJ, Cambridge, UK.

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http://dx.doi.org/10.1016/s0264-410x(03)00068-9DOI Listing
May 2003