Denise Carvalho-Silva

Denise Carvalho-Silva

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Denise Carvalho-Silva

Denise Carvalho-Silva

Publications by authors named "Denise Carvalho-Silva"

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32Publications

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Eleven quick tips to build a usable REST API for life sciences.

PLoS Comput Biol 2018 12 13;14(12):e1006542. Epub 2018 Dec 13.

European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus, Hinxton, Cambridge, United Kingdom.

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http://dx.doi.org/10.1371/journal.pcbi.1006542DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6292566PMC
December 2018

Ten simple rules for delivering live distance training in bioinformatics across the globe using webinars.

PLoS Comput Biol 2018 11 15;14(11):e1006419. Epub 2018 Nov 15.

European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus, Hinxton, Cambridgeshire, United Kingdom.

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http://dx.plos.org/10.1371/journal.pcbi.1006419
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http://dx.doi.org/10.1371/journal.pcbi.1006419DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6237289PMC
November 2018

Designing an intuitive web application for drug discovery scientists.

Drug Discov Today 2018 06 11;23(6):1169-1174. Epub 2018 Jan 11.

Open Targets, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK; European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.

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http://dx.doi.org/10.1016/j.drudis.2018.01.032DOI Listing
June 2018

Gene conversion violates the stepwise mutation model for microsatellites in y-chromosomal palindromic repeats.

Hum Mutat 2014 May;35(5):609-17

UMR5288 CNRS/UPS-AMIS-Université Paul Sabatier, Toulouse, France; Department of Genetics, University of Leicester, Leicester, UK.

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http://dx.doi.org/10.1002/humu.22542DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4233959PMC
May 2014

Analyses of pig genomes provide insight into porcine demography and evolution.

Authors:
Martien A M Groenen Alan L Archibald Hirohide Uenishi Christopher K Tuggle Yasuhiro Takeuchi Max F Rothschild Claire Rogel-Gaillard Chankyu Park Denis Milan Hendrik-Jan Megens Shengting Li Denis M Larkin Heebal Kim Laurent A F Frantz Mario Caccamo Hyeonju Ahn Bronwen L Aken Anna Anselmo Christian Anthon Loretta Auvil Bouabid Badaoui Craig W Beattie Christian Bendixen Daniel Berman Frank Blecha Jonas Blomberg Lars Bolund Mirte Bosse Sara Botti Zhan Bujie Megan Bystrom Boris Capitanu Denise Carvalho-Silva Patrick Chardon Celine Chen Ryan Cheng Sang-Haeng Choi William Chow Richard C Clark Christopher Clee Richard P M A Crooijmans Harry D Dawson Patrice Dehais Fioravante De Sapio Bert Dibbits Nizar Drou Zhi-Qiang Du Kellye Eversole João Fadista Susan Fairley Thomas Faraut Geoffrey J Faulkner Katie E Fowler Merete Fredholm Eric Fritz James G R Gilbert Elisabetta Giuffra Jan Gorodkin Darren K Griffin Jennifer L Harrow Alexander Hayward Kerstin Howe Zhi-Liang Hu Sean J Humphray Toby Hunt Henrik Hornshøj Jin-Tae Jeon Patric Jern Matthew Jones Jerzy Jurka Hiroyuki Kanamori Ronan Kapetanovic Jaebum Kim Jae-Hwan Kim Kyu-Won Kim Tae-Hun Kim Greger Larson Kyooyeol Lee Kyung-Tai Lee Richard Leggett Harris A Lewin Yingrui Li Wansheng Liu Jane E Loveland Yao Lu Joan K Lunney Jian Ma Ole Madsen Katherine Mann Lucy Matthews Stuart McLaren Takeya Morozumi Michael P Murtaugh Jitendra Narayan Dinh Truong Nguyen Peixiang Ni Song-Jung Oh Suneel Onteru Frank Panitz Eung-Woo Park Hong-Seog Park Geraldine Pascal Yogesh Paudel Miguel Perez-Enciso Ricardo Ramirez-Gonzalez James M Reecy Sandra Rodriguez-Zas Gary A Rohrer Lauretta Rund Yongming Sang Kyle Schachtschneider Joshua G Schraiber John Schwartz Linda Scobie Carol Scott Stephen Searle Bertrand Servin Bruce R Southey Goran Sperber Peter Stadler Jonathan V Sweedler Hakim Tafer Bo Thomsen Rashmi Wali Jian Wang Jun Wang Simon White Xun Xu Martine Yerle Guojie Zhang Jianguo Zhang Jie Zhang Shuhong Zhao Jane Rogers Carol Churcher Lawrence B Schook

Nature 2012 Nov;491(7424):393-8

Animal Breeding and Genomics Centre, Wageningen University, De Elst 1, 6708 WD, Wageningen, The Netherlands.

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http://www.umass.edu/vetimm/docs/Groenen_etal_2012.pdf
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http://www.nature.com/doifinder/10.1038/nature11622
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http://dx.doi.org/10.1038/nature11622DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3566564PMC
November 2012

The Grandest Genetic Experiment Ever Performed on Man? - A Y-Chromosomal Perspective on Genetic Variation in India.

Int J Hum Genet 2008 May;8(1-2):21-29

The Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambs. CB10 1SA, UK.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2987567PMC
http://dx.doi.org/10.1080/09723757.2008.11886016DOI Listing
May 2008

Ancient Indian roots?

J Biosci 2006 Mar;31(1):1-2

The Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambs., UK.

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http://dx.doi.org/10.1007/bf02705228DOI Listing
March 2006

Y chromosome diversity in Brazilians: switching perspectives from slow to fast evolving markers.

Genetica 2006 Jan;126(1-2):251-60

Departamento de Bioquímica e Imunologia, Universidade Federal de Minas Gerais, Av. Afonso Pena 3111/9, 30130-909, Belo Horizonte, Brazil.

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http://dx.doi.org/10.1007/s10709-005-1454-zDOI Listing
January 2006

Autosomal location of genes from the conserved mammalian X in the platypus (Ornithorhynchus anatinus): implications for mammalian sex chromosome evolution.

Chromosome Res 2005 ;13(4):401-10

Comparative Genomics Group, Research Group of Biological Science, The Australian National University, Canberra, ACT, 2601, Australia.

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http://dx.doi.org/10.1007/s10577-005-0978-5DOI Listing
September 2005

Molecular characterization and evolution of X and Y-borne ATRX homologues in American marsupials.

Chromosome Res 2004 ;12(8):795-804

Research School of Biological Science, Australian National University, ACT 0200, Canberra, Australia.

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http://dx.doi.org/10.1007/s10577-005-5376-5DOI Listing
May 2005

Genetic variation of the Y chromosome in Chibcha-speaking Amerindians of Costa Rica and Panama.

Hum Biol 2005 Feb;77(1):71-91

Instituto de Investigaciones en Salud (INISA) and Escuela de Biología, Universidad de Costa Rica, San José, Costa Rica.

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http://dx.doi.org/10.1353/hub.2005.0032DOI Listing
February 2005

Genetic instability in EBV-transformed lymphoblastoid cell lines.

Biochim Biophys Acta 2004 Jan;1670(1):81-3

Biomedical and Genetic Engineering Division, Dr. A. Q. Khan Research Laboratories, G.P.O. Box 2891, Islamabad 44000, Pakistan.

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http://dx.doi.org/10.1016/j.bbagen.2003.10.014DOI Listing
January 2004