Publications by authors named "Debashish Ray"

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The Crystal Structure of the NHL Domain in Complex with RNA Reveals the Molecular Basis of Drosophila Brain-Tumor-Mediated Gene Regulation.
Cell Rep 2015 Nov 29;13(6):1206-1220. Epub 2015 Oct 29.
Laboratory for RNA Biology, Biochemistry Center Regensburg, University of Regensburg, 93053 Regensburg, Germany. Electronic address:


Large-scale interaction profiling of PDZ domains through proteomic peptide-phage display using human and viral phage peptidomes.
Proc Natl Acad Sci U S A 2014 Feb 3;111(7):2542-7. Epub 2014 Feb 3.
Department of Molecular Genetics, Department of Computer Science, Donnelly Centre, University of Toronto, Toronto, ON, Canada M5S 3E1.


Conserved functional antagonism of CELF and MBNL proteins controls stem cell-specific alternative splicing in planarians.
Elife 2016 08 9;5. Epub 2016 Aug 9.
Systems Biology of Gene Regulatory Elements, Berlin Institute for Medical Systems Biology, Max-Delbrück Center for Molecular Medicine, Berlin, Germany.

RNAcompete methodology and application to determine sequence preferences of unconventional RNA-binding proteins.
Methods 2017 04 10;118-119:3-15. Epub 2016 Dec 10.
Terrence Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, Toronto, Ontario M5S 3E1, Canada; Department of Computer Science, University of Toronto, Toronto, Ontario M5S 3G4, Canada; Department of Molecular Genetics, University of Toronto, Toronto, Ontario M5S 1A8, Canada. Electronic address:

RNAcompete-S: Combined RNA sequence/structure preferences for RNA binding proteins derived from a single-step in vitro selection.
Methods 2017 08 24;126:18-28. Epub 2017 Jun 24.
Department of Molecular Genetics, University of Toronto, Toronto M5S 1A8, Canada; Donnelly Centre, University of Toronto, Toronto M5S 3E1, Canada; Department of Computer Science, University of Toronto, Toronto M5S 2E4, Canada; Department of Electrical and Computer Engineering, University of Toronto, Toronto M5S 3G4, Canada. Electronic address:

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