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Publications Authored by David Tannahill | PubFacts
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Genetic interactions of G-quadruplexes in humans.

Authors:
Katherine G Zyner Darcie S Mulhearn Santosh Adhikari Sergio Martínez Cuesta Marco Di Antonio Nicolas Erard Gregory J Hannon David Tannahill Shankar Balasubramanian

Elife 2019 07 9;8. Epub 2019 Jul 9.

Cancer Research United Kingdom Cambridge Institute, Cambridge, United Kingdom.

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http://dx.doi.org/10.7554/eLife.46793DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6615864PMC
July 2019

Analysis of NRAS RNA G-quadruplex binding proteins reveals DDX3X as a novel interactor of cellular G-quadruplex containing transcripts.

Authors:
Barbara Herdy Clemens Mayer Dhaval Varshney Giovanni Marsico Pierre Murat Chris Taylor Clive D'Santos David Tannahill Shankar Balasubramanian

Nucleic Acids Res 2018 11;46(21):11592-11604

Cancer Research UK Cambridge Institute, University of Cambridge, Li Ka Shing Centre, Robinson Way, Cambridge CB2 0RE, UK.

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https://academic.oup.com/nar/advance-article/doi/10.1093/nar
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http://dx.doi.org/10.1093/nar/gky861DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6265444PMC
November 2018

Identification of the extracellular matrix protein Fibulin-2 as a regulator of spinal nerve organization.

Authors:
Julia Schaeffer David Tannahill Jean-Michel Cioni Dáire Rowlands Roger Keynes

Dev Biol 2018 10 23;442(1):101-114. Epub 2018 Jun 23.

Department of Physiology, Development and Neuroscience, University of Cambridge, UK.

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http://dx.doi.org/10.1016/j.ydbio.2018.06.014DOI Listing
October 2018

DNA G-quadruplex structures mold the DNA methylome.

Authors:
Shi-Qing Mao Avazeh T Ghanbarian Jochen Spiegel Sergio Martínez Cuesta Dario Beraldi Marco Di Antonio Giovanni Marsico Robert Hänsel-Hertsch David Tannahill Shankar Balasubramanian

Nat Struct Mol Biol 2018 10 1;25(10):951-957. Epub 2018 Oct 1.

Cancer Research UK Cambridge Institute, Li Ka Shing Centre, Cambridge, UK.

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http://www.nature.com/articles/s41594-018-0131-8
Publisher Site
http://dx.doi.org/10.1038/s41594-018-0131-8DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6173298PMC
October 2018

Targeting Multiple Effector Pathways in Pancreatic Ductal Adenocarcinoma with a G-Quadruplex-Binding Small Molecule.

Authors:
Chiara Marchetti Katherine G Zyner Stephan A Ohnmacht Mathew Robson Shozeb M Haider Jennifer P Morton Giovanni Marsico Tam Vo Sarah Laughlin-Toth Ahmed A Ahmed Gloria Di Vita Ingrida Pazitna Mekala Gunaratnam Rachael J Besser Ana C G Andrade Seckou Diocou Jeremy A Pike David Tannahill R Barbara Pedley T R Jeffry Evans W David Wilson Shankar Balasubramanian Stephen Neidle

J Med Chem 2018 03 7;61(6):2500-2517. Epub 2018 Feb 7.

UCL School of Pharmacy , University College London , 29-39 Brunswick Square , London WC1N 1AX , U.K.

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http://dx.doi.org/10.1021/acs.jmedchem.7b01781DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5867665PMC
March 2018

Genome-wide mapping of endogenous G-quadruplex DNA structures by chromatin immunoprecipitation and high-throughput sequencing.

Authors:
Robert Hänsel-Hertsch Jochen Spiegel Giovanni Marsico David Tannahill Shankar Balasubramanian

Nat Protoc 2018 03 22;13(3):551-564. Epub 2018 Feb 22.

Cancer Research UK, Cambridge Institute, Li Ka Shing Centre, Cambridge, UK.

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http://dx.doi.org/10.1038/nprot.2017.150DOI Listing
March 2018

DSBCapture: in situ capture and sequencing of DNA breaks.

Authors:
Stefanie V Lensing Giovanni Marsico Robert Hänsel-Hertsch Enid Y Lam David Tannahill Shankar Balasubramanian

Nat Methods 2016 10 15;13(10):855-7. Epub 2016 Aug 15.

Cancer Research UK Cambridge Institute, University of Cambridge, Cambridge, UK.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5045719PMC
http://dx.doi.org/10.1038/nmeth.3960DOI Listing
October 2016

G-quadruplex structures mark human regulatory chromatin.

Authors:
Robert Hänsel-Hertsch Dario Beraldi Stefanie V Lensing Giovanni Marsico Katherine Zyner Aled Parry Marco Di Antonio Jeremy Pike Hiroshi Kimura Masashi Narita David Tannahill Shankar Balasubramanian

Nat Genet 2016 10 12;48(10):1267-72. Epub 2016 Sep 12.

Cancer Research UK, Cambridge Institute, Li Ka Shing Centre, Cambridge, UK.

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http://dx.doi.org/10.1038/ng.3662DOI Listing
October 2016

Elevated levels of G-quadruplex formation in human stomach and liver cancer tissues.

Authors:
Giulia Biffi David Tannahill Jodi Miller William J Howat Shankar Balasubramanian

PLoS One 2014 17;9(7):e102711. Epub 2014 Jul 17.

Cancer Research UK Cambridge Institute, University of Cambridge, Cambridge, United Kingdom; Department of Chemistry, University of Cambridge, Cambridge, United Kingdom.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0102711PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4102534PMC
November 2015

FOXM1 binds directly to non-consensus sequences in the human genome.

Authors:
Deborah A Sanders Michael V Gormally Giovanni Marsico Dario Beraldi David Tannahill Shankar Balasubramanian

Genome Biol 2015 Jun 23;16:130. Epub 2015 Jun 23.

Cancer Research UK, Cambridge Research Institute, Li Ka Shing Center, Robinson Way, Cambridge, CB2 0RE, UK.

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http://dx.doi.org/10.1186/s13059-015-0696-zDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4492089PMC
June 2015

Visualization and selective chemical targeting of RNA G-quadruplex structures in the cytoplasm of human cells.

Authors:
Giulia Biffi Marco Di Antonio David Tannahill Shankar Balasubramanian

Nat Chem 2014 Jan 24;6(1):75-80. Epub 2013 Nov 24.

1] Cancer Research UK Cambridge Institute, Li Ka Shing Centre, Robinson Way, Cambridge CB2 0RE, UK [2] Department of Chemistry, University of Cambridge, Lensfield Road, Cambridge CB2 1EW, UK.

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http://dx.doi.org/10.1038/nchem.1805DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4081541PMC
January 2014

G-quadruplex structures are stable and detectable in human genomic DNA.

Authors:
Enid Yi Ni Lam Dario Beraldi David Tannahill Shankar Balasubramanian

Nat Commun 2013 ;4:1796

Cancer Research UK Cambridge Institute, University of Cambridge, Li Ka Shing Centre, Robinson Way, Cambridge CB2 0RE, UK.

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http://dx.doi.org/10.1038/ncomms2792DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3736099PMC
November 2013

G-quadruplex DNA as a molecular target for induced synthetic lethality in cancer cells.

Authors:
Keith I E McLuckie Marco Di Antonio Heather Zecchini Jian Xian Carlos Caldas Ben-Fillippo Krippendorff David Tannahill Christopher Lowe Shankar Balasubramanian

J Am Chem Soc 2013 Jul 25;135(26):9640-3. Epub 2013 Jun 25.

Cancer Research UK Cambridge Institute, Li Ka Shing Centre, Robinson Way, Cambridge, CB2 0RE, United Kingdom.

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http://dx.doi.org/10.1021/ja404868tDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3964824PMC
July 2013

Genome-wide generation and systematic phenotyping of knockout mice reveals new roles for many genes.

Authors:
Jacqueline K White Anna-Karin Gerdin Natasha A Karp Ed Ryder Marija Buljan James N Bussell Jennifer Salisbury Simon Clare Neil J Ingham Christine Podrini Richard Houghton Jeanne Estabel Joanna R Bottomley David G Melvin David Sunter Niels C Adams David Tannahill Darren W Logan Daniel G Macarthur Jonathan Flint Vinit B Mahajan Stephen H Tsang Ian Smyth Fiona M Watt William C Skarnes Gordon Dougan David J Adams Ramiro Ramirez-Solis Allan Bradley Karen P Steel

Cell 2013 Jul;154(2):452-64

Wellcome Trust Sanger Institute, Hinxton, Cambridge CB10 1SA, UK.

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http://dx.doi.org/10.1016/j.cell.2013.06.022DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3717207PMC
July 2013

Quantitative visualization of DNA G-quadruplex structures in human cells.

Authors:
Giulia Biffi David Tannahill John McCafferty Shankar Balasubramanian

Nat Chem 2013 Mar 20;5(3):182-6. Epub 2013 Jan 20.

Cancer Research UK, Cambridge Institute, Li Ka Shing Centre, Robinson Way, Cambridge CB2 0RE, UK.

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http://dx.doi.org/10.1038/nchem.1548DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3622242PMC
March 2013

An intramolecular G-quadruplex structure is required for binding of telomeric repeat-containing RNA to the telomeric protein TRF2.

Authors:
Giulia Biffi David Tannahill Shankar Balasubramanian

J Am Chem Soc 2012 Jul 13;134(29):11974-6. Epub 2012 Jul 13.

Cancer Research UK Cambridge Research Institute, Robinson Way, Cambridge CB2 0RE, UK.

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http://pubs.acs.org/doi/10.1021/ja305734x
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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3528108PMC
July 2012

The generation of vertebral segmental patterning in the chick embryo.

Authors:
Biruntha Senthinathan Cátia Sousa David Tannahill Roger Keynes

J Anat 2012 Jun 28;220(6):591-602. Epub 2012 Mar 28.

Department of Physiology, Development and Neuroscience, University of Cambridge, Cambridge, UK.

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http://dx.doi.org/10.1111/j.1469-7580.2012.01497.xDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3390512PMC
June 2012

The intrinsic innervation of the lung is derived from neural crest cells as shown by optical projection tomography in Wnt1-Cre;YFP reporter mice.

Authors:
Lucy J Freem Sophie Escot David Tannahill Noah R Druckenbrod Nikhil Thapar Alan J Burns

J Anat 2010 Dec 14;217(6):651-64. Epub 2010 Sep 14.

Neural Development Unit, UCL Institute of Child Health, London, UK.

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http://doi.wiley.com/10.1111/j.1469-7580.2010.01295.x
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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3039178PMC
December 2010

Mutations in FLVCR2 are associated with proliferative vasculopathy and hydranencephaly-hydrocephaly syndrome (Fowler syndrome).

Authors:
Esther Meyer Christopher Ricketts Neil V Morgan Mark R Morris Shanaz Pasha Louise J Tee Fatimah Rahman Anne Bazin Bettina Bessières Pierre Déchelotte Mohamed T Yacoubi Mudher Al-Adnani Tamas Marton David Tannahill Richard C Trembath Catherine Fallet-Bianco Phillip Cox Denise Williams Eamonn R Maher

Am J Hum Genet 2010 Mar 4;86(3):471-8. Epub 2010 Mar 4.

Department of Medical and Molecular Genetics, Institute of Biomedical Research, University of Birmingham, Birmingham, B15 2TT, UK.

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http://dx.doi.org/10.1016/j.ajhg.2010.02.004DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2833392PMC
March 2010

Mutations in SLC29A3, encoding an equilibrative nucleoside transporter ENT3, cause a familial histiocytosis syndrome (Faisalabad histiocytosis) and familial Rosai-Dorfman disease.

Authors:
Neil V Morgan Mark R Morris Hakan Cangul Diane Gleeson Anna Straatman-Iwanowska Nicholas Davies Stephen Keenan Shanaz Pasha Fatimah Rahman Dean Gentle Maaike P G Vreeswijk Peter Devilee Margaret A Knowles Serdar Ceylaner Richard C Trembath Carlos Dalence Erol Kismet Vedat Köseoğlu Hans-Christoph Rossbach Paul Gissen David Tannahill Eamonn R Maher

PLoS Genet 2010 Feb 5;6(2):e1000833. Epub 2010 Feb 5.

Wellchild Paediatric Research Centre and Department of Medical and Molecular Genetics, University of Birmingham College of Medical and Dental Sciences, Edgbaston, Birmingham, United Kingdom.

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http://dx.doi.org/10.1371/journal.pgen.1000833DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2816679PMC
February 2010

Extensive molecular differences between anterior- and posterior-half-sclerotomes underlie somite polarity and spinal nerve segmentation.

Authors:
Daniel S T Hughes Roger J Keynes David Tannahill

BMC Dev Biol 2009 May 22;9:30. Epub 2009 May 22.

Department of Physiology, Development and Neuroscience, University of Cambridge, Downing Street, Cambridge, CB3 2DY, UK.

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http://dx.doi.org/10.1186/1471-213X-9-30DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2693541PMC
May 2009

Endoglin expression in blood and endothelium is differentially regulated by modular assembly of the Ets/Gata hemangioblast code.

Authors:
John E Pimanda Wan Y I Chan Nicola K Wilson Aileen M Smith Sarah Kinston Kathy Knezevic Mary E Janes Josette-Renée Landry Anja Kolb-Kokocinski Jonathan Frampton David Tannahill Katrin Ottersbach George A Follows Georges Lacaud Valerie Kouskoff Berthold Göttgens

Blood 2008 Dec 19;112(12):4512-22. Epub 2008 Sep 19.

Department of Haematology, Cambridge Institute for Medical Research, University of Cambridge, Cambridge, United Kingdom.

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http://www.bloodjournal.org/cgi/doi/10.1182/blood-2008-05-15
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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2682356PMC
December 2008

Gata2, Fli1, and Scl form a recursively wired gene-regulatory circuit during early hematopoietic development.

Authors:
John E Pimanda Katrin Ottersbach Kathy Knezevic Sarah Kinston Wan Y I Chan Nicola K Wilson Josette-Renée Landry Andrew D Wood Anja Kolb-Kokocinski Anthony R Green David Tannahill Georges Lacaud Valerie Kouskoff Berthold Göttgens

Proc Natl Acad Sci U S A 2007 Nov 25;104(45):17692-7. Epub 2007 Oct 25.

Department of Haematology, Cambridge Institute for Medical Research, University of Cambridge, Cambridge CB2 0XY, United Kingdom.

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http://dx.doi.org/10.1073/pnas.0707045104DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2077040PMC
November 2007

The SCL transcriptional network and BMP signaling pathway interact to regulate RUNX1 activity.

Authors:
John E Pimanda Ian J Donaldson Marella F T R de Bruijn Sarah Kinston Kathy Knezevic Liz Huckle Sandie Piltz Josette-Renée Landry Anthony R Green David Tannahill Berthold Göttgens

Proc Natl Acad Sci U S A 2007 Jan 9;104(3):840-5. Epub 2007 Jan 9.

Cambridge Institute for Medical Research, University of Cambridge, Cambridge CB2 2XY, United Kingdom.

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http://dx.doi.org/10.1073/pnas.0607196104DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1783401PMC
January 2007

A Sall4 mutant mouse model useful for studying the role of Sall4 in early embryonic development and organogenesis.

Authors:
Madhuri Warren Wei Wang Sarah Spiden Dongrong Chen-Murchie David Tannahill Karen P Steel Allan Bradley

Genesis 2007 Jan;45(1):51-8

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http://doi.wiley.com/10.1002/dvg.20264
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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2593393PMC
January 2007

Transcriptional link between blood and bone: the stem cell leukemia gene and its +19 stem cell enhancer are active in bone cells.

Authors:
John E Pimanda Lev Silberstein Massimo Dominici Benjamin Dekel Mark Bowen Scott Oldham Asha Kallianpur Stephen J Brandt David Tannahill Berthold Göttgens Anthony R Green

Mol Cell Biol 2006 Apr;26(7):2615-25

Department of Haematology, Cambridge Institute for Medical Research, University of Cambridge, Cambridge CB2 2XY, United Kingdom.

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http://dx.doi.org/10.1128/MCB.26.7.2615-2625.2006DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1430329PMC
April 2006

Role of morphogens in brain growth.

Authors:
David Tannahill Laura W Harris Roger Keynes

J Neurobiol 2005 Sep;64(4):367-75

The Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA, United Kingdom.

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http://dx.doi.org/10.1002/neu.20163DOI Listing
September 2005

Null and conditional semaphorin 3B alleles using a flexible puroDeltatk loxP/FRT vector.

Authors:
Louise van der Weyden David J Adams Laura W Harris David Tannahill Mark J Arends Allan Bradley

Genesis 2005 Apr;41(4):171-8

Wellcome Trust Sanger Institute, Wellcome Genome Campus, Hinxton, Cambridge, United Kingdom.

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http://dx.doi.org/10.1002/gene.20111DOI Listing
April 2005

Mutations of the catalytic subunit of RAB3GAP cause Warburg Micro syndrome.

Authors:
Irene A Aligianis Colin A Johnson Paul Gissen Dongrong Chen Daniel Hampshire Katrin Hoffmann Esther N Maina Neil V Morgan Louise Tee Jenny Morton John R Ainsworth Denise Horn Elisabeth Rosser Trevor R P Cole Irene Stolte-Dijkstra Karen Fieggen Jill Clayton-Smith André Mégarbané Julian P Shield Ruth Newbury-Ecob William B Dobyns John M Graham Klaus W Kjaer Mette Warburg Jacqueline Bond Richard C Trembath Laura W Harris Yoshimi Takai Stefan Mundlos David Tannahill C Geoffery Woods Eamonn R Maher

Nat Genet 2005 Mar;37(3):221-3

Section of Medical and Molecular Genetics, University of Birmingham, Birmingham, B15 2TT, UK.

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http://dx.doi.org/10.1038/ng1517DOI Listing
March 2005

BRCTx is a novel, highly conserved RAD18-interacting protein.

Authors:
David J Adams Louise van der Weyden Fanni V Gergely Mark J Arends Bee Ling Ng David Tannahill Roland Kanaar Andrea Markus Brian J Morris Allan Bradley

Mol Cell Biol 2005 Jan;25(2):779-88

The Wellcome Trust Sanger Institute Hinxton, Cambs CB10 1SA, United Kingdom.

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http://dx.doi.org/10.1128/MCB.25.2.779-788.2005DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC543416PMC
January 2005

Somite polarity and segmental patterning of the peripheral nervous system.

Authors:
C-Y Kelly Kuan David Tannahill Geoffrey M W Cook Roger J Keynes

Mech Dev 2004 Sep;121(9):1055-68

Department of Anatomy, University of Cambridge, Downing Street, Cambridge CB2 3DY, UK.

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http://dx.doi.org/10.1016/j.mod.2004.05.001DOI Listing
September 2004

A central role for the notochord in vertebral patterning.

Authors:
Angeleen Fleming Roger Keynes David Tannahill

Development 2004 Feb 21;131(4):873-80. Epub 2004 Jan 21.

Department of Anatomy, University of Cambridge, Downing Street, Cambridge CB2 3DY, UK.

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http://dev.biologists.org/cgi/doi/10.1242/dev.00952
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February 2004

Molecular analysis of axon repulsion by the notochord.

Authors:
Christopher N G Anderson Kunimasa Ohta Marie M Quick Angeleen Fleming Roger Keynes David Tannahill

Development 2003 Mar;130(6):1123-33

Department of Anatomy, University of Cambridge, Downing Street, Cambridge CB2 3DY, UK.

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http://dx.doi.org/10.1242/dev.00327DOI Listing
March 2003

A critical role for sonic hedgehog signaling in the early expansion of the developing brain.

Authors:
Joanne Britto David Tannahill Roger Keynes

Nat Neurosci 2002 Feb;5(2):103-10

Department of Anatomy, University of Cambridge, Downing Street, Cambridge CB2 3DY, UK.

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http://www.nature.com/articles/nn797
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February 2002