David F Burke

David F Burke

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David F Burke

David F Burke

Publications by authors named "David F Burke"

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Amino Acid Substitutions That Affect Receptor Binding and Stability of the Hemagglutinin of Influenza A/H7N9 Virus.

J Virol 2016 Jan 20;90(7):3794-9. Epub 2016 Jan 20.

Department of Viroscience, Postgraduate School Molecular Medicine, Erasmus MC, Rotterdam, The Netherlands.

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http://dx.doi.org/10.1128/JVI.03052-15DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4794686PMC
January 2016

A recommended numbering scheme for influenza A HA subtypes.

PLoS One 2014 12;9(11):e112302. Epub 2014 Nov 12.

Department of Zoology, University of Cambridge, Cambridge, United Kingdom.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0112302PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4229193PMC
July 2015

Polymorphisms at amino acid residues 141 and 154 influence conformational variation in ovine PrP.

Biomed Res Int 2014 14;2014:372491. Epub 2014 Jul 14.

Department of Veterinary Medicine, University of Cambridge, Madingley Road, Cambridge CB3 OES, UK.

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http://dx.doi.org/10.1155/2014/372491DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4122135PMC
May 2015

Circulating avian influenza viruses closely related to the 1918 virus have pandemic potential.

Cell Host Microbe 2014 Jun;15(6):692-705

Department of Pathobiological Sciences, School of Veterinary Medicine, University of Wisconsin-Madison, 575 Science Drive, Madison, WI 53711, USA; ERATO Infection-Induced Host Responses Project, Japan Science and Technology Agency, Saitama 332-0012, Japan; Division of Virology, Department of Microbiology and Immunology, Institute of Medical Science, University of Tokyo, Tokyo 108-8639, Japan; Department of Special Pathogens, International Research Center for Infectious Diseases, Institute of Medical Science, University of Tokyo, Minato-ku, Tokyo 108-8639, Japan. Electronic address:

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http://dx.doi.org/10.1016/j.chom.2014.05.006DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4205238PMC
June 2014

A review of influenza haemagglutinin receptor binding as it relates to pandemic properties.

Vaccine 2012 Jun;30(29):4369-76

Department of Zoology, University of Cambridge, Downing Street, Cambridge CB2 3EJ, United Kingdom.

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http://dx.doi.org/10.1016/j.vaccine.2012.02.076DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3372863PMC
June 2012

Discordant antigenic drift of neuraminidase and hemagglutinin in H1N1 and H3N2 influenza viruses.

Proc Natl Acad Sci U S A 2011 Dec 5;108(51):20748-53. Epub 2011 Dec 5.

Division of Viral Products, Center for Biologics Evaluation and Research, Food and Drug Administration, Bethesda, MD 20892, USA.

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http://dx.doi.org/10.1073/pnas.1113801108DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3251064PMC
December 2011

Structure of a glycosylphosphatidylinositol-anchored domain from a trypanosome variant surface glycoprotein.

J Biol Chem 2008 Feb 14;283(6):3584-93. Epub 2007 Nov 14.

Department of Biochemistry, University of Cambridge, Cambridge CB2 1GA, United Kingdom.

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http://dx.doi.org/10.1074/jbc.M706207200DOI Listing
February 2008

Comparative modelling by restraint-based conformational sampling.

BMC Struct Biol 2008 Jan 31;8. Epub 2008 Jan 31.

Department of Biochemistry, Sanger Building, University of Cambridge, 80 Tennis Court Road, Cambridge, CB2 1GA, UK.

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http://dx.doi.org/10.1186/1472-6807-8-7DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2275734PMC
January 2008

A structural bioinformatics approach to the analysis of nonsynonymous single nucleotide polymorphisms (nsSNPs) and their relation to disease.

J Bioinform Comput Biol 2007 Dec;5(6):1297-318

Biocomputing Group, Department of Biochemistry, University of Cambridge, Cambridge, UK.

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December 2007

Genome bioinformatic analysis of nonsynonymous SNPs.

BMC Bioinformatics 2007 Aug 20;8:301. Epub 2007 Aug 20.

Department of Biochemistry, University of Cambridge, 80 Tennis Court Road, Cambridge, CB2 1GA, UK.

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http://dx.doi.org/10.1186/1471-2105-8-301DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1978506PMC
August 2007

Andante: reducing side-chain rotamer search space during comparative modeling using environment-specific substitution probabilities.

Bioinformatics 2007 May 6;23(9):1099-105. Epub 2007 Mar 6.

Department of Biochemistry, University of Cambridge, Cambridge, UK.

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http://dx.doi.org/10.1093/bioinformatics/btm073DOI Listing
May 2007

Structural differences between allelic variants of the ovine prion protein revealed by molecular dynamics simulations.

Proteins 2005 Dec;61(4):840-9

Centre for Veterinary Science, Department of Veterinary Medicine, University of Cambridge, Cambridge, CB3 OES, UK.

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http://dx.doi.org/10.1002/prot.20755DOI Listing
December 2005

PROVAT: a tool for Voronoi tessellation analysis of protein structures and complexes.

Bioinformatics 2005 Aug 2;21(15):3316-7. Epub 2005 Jun 2.

Department of Biochemistry, University of Cambridge, Cambridge CB2 1GA, UK.

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http://dx.doi.org/10.1093/bioinformatics/bti523DOI Listing
August 2005

A novel type of deubiquitinating enzyme.

J Biol Chem 2003 Jun 7;278(25):23180-6. Epub 2003 Apr 7.

Molecular Immunology Programme, The Babraham Institute, Cambridge CB2 4AT, United Kingdom.

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http://dx.doi.org/10.1074/jbc.M301863200DOI Listing
June 2003