David Clayton

David Clayton

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David Clayton

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Breakfast Omission Reduces Subsequent Resistance Exercise Performance.

J Strength Cond Res 2019 Jul;33(7):1766-1772

National Center of Sport and Exercise Medicine, School of Sport Exercise and Health Science, Loughborough University, Leicester, United Kingdom.

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http://dx.doi.org/10.1519/JSC.0000000000003054DOI Listing
July 2019

Acute social isolation alters neurogenomic state in songbird forebrain.

Proc Natl Acad Sci U S A 2019 Jul 22. Epub 2019 Jul 22.

School of Biological and Chemical Sciences, Queen Mary University of London, E1 4NS London, United Kingdom;

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http://dx.doi.org/10.1073/pnas.1820841116DOI Listing
July 2019

The role of the genome in experience-dependent plasticity: Extending the analogy of the genomic action potential.

Proc Natl Acad Sci U S A 2019 May 24. Epub 2019 May 24.

Program in Child and Brain Development, Canadian Institute for Advanced Research, Toronto, ON M5G 1M1, Canada;

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http://dx.doi.org/10.1073/pnas.1820837116DOI Listing
May 2019

The variability of song variability in zebra finch () populations.

R Soc Open Sci 2019 May 15;6(5):190273. Epub 2019 May 15.

Department of Biology, East Carolina University, Greenville, NC, USA.

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http://dx.doi.org/10.1098/rsos.190273DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6549970PMC
May 2019

Urotensin-related gene transcripts mark developmental emergence of the male forebrain vocal control system in songbirds.

Sci Rep 2019 Jan 28;9(1):816. Epub 2019 Jan 28.

Department of Biological and Experimental Psychology, School of Biological and Chemical Sciences, Queen Mary University of London, Mile End Road, London, E1 4NS, UK.

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http://dx.doi.org/10.1038/s41598-018-37057-wDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6349858PMC
January 2019

Advanced imaging findings in progressive solitary sclerosis: a single lesion or a global disease?

Mult Scler J Exp Transl Clin 2019 Jan-Mar;5(1):2055217318824612. Epub 2019 Jan 16.

Department of Medicine (Neurology), University of British Columbia, CanadaThe first two and final two authors contributed equally to the manuscript.

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http://dx.doi.org/10.1177/2055217318824612DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6350151PMC
January 2019

24-h severe energy restriction impairs postprandial glycaemic control in young, lean males.

Br J Nutr 2018 11;120(10):1107-1116

1National Centre for Sport and Exercise Medicine,School of Sport,Exercise and Health Sciences,Loughborough University,Loughborough,LeicestershireLE11 3TU,UK.

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http://dx.doi.org/10.1017/S0007114518002568DOI Listing
November 2018

ABBY: A phase 2 randomized trial of crenezumab in mild to moderate Alzheimer disease.

Neurology 2018 05 25;90(21):e1889-e1897. Epub 2018 Apr 25.

From the Cleveland Clinic Lou Ruvo Center for Brain Health (J.L.C.), Las Vegas, NV; Toronto Memory Program (S.C.), ON, Canada; Alzheimer's Disease Research Unit (C.H.v.D.), Yale University School of Medicine, New Haven, CT; Brain Matters Research Inc (M.B.), Delray Beach, FL; Compass Research, LLC (C.C.), Orlando, FL; Genentech (W.C., M.W., M.F., F.B., A.Q., L.A.H., R.N.F., D.C., D.M., C.H., R.P.), South San Francisco, CA; and Roche Diagnostics (C.R.), Penzberg, Germany.

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http://www.neurology.org/lookup/doi/10.1212/WNL.000000000000
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http://dx.doi.org/10.1212/WNL.0000000000005550DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5962917PMC
May 2018

Effect of 24-h severe energy restriction on appetite regulation and ad libitum energy intake in lean men and women.

Am J Clin Nutr 2016 12 2;104(6):1545-1553. Epub 2016 Nov 2.

School of Sport, Exercise and Health Science, Loughborough University, Loughborough, United Kingdom

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http://dx.doi.org/10.3945/ajcn.116.136937DOI Listing
December 2016

The effect of breakfast on appetite regulation, energy balance and exercise performance.

Proc Nutr Soc 2016 08 14;75(3):319-27. Epub 2015 Dec 14.

School of Sport,Exercise and Health Sciences,Loughborough University,Loughborough,Leicestershire LE11 3HD,UK.

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http://dx.doi.org/10.1017/S0029665115004243DOI Listing
August 2016

Mitochondrial Transcription Factor A (TFAM) Binds to RNA Containing 4-Way Junctions and Mitochondrial tRNA.

PLoS One 2015 6;10(11):e0142436. Epub 2015 Nov 6.

Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, Virginia, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0142436PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4636309PMC
June 2016

Detailed temporal structure of communication networks in groups of songbirds.

J R Soc Interface 2016 06;13(119)

School of Biological and Chemical Sciences, Queen Mary University of London, London, UK.

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http://dx.doi.org/10.1098/rsif.2016.0296DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4938092PMC
June 2016

Effect of breakfast omission on subjective appetite, metabolism, acylated ghrelin and GLP-17-36 during rest and exercise.

Nutrition 2016 Feb 22;32(2):179-85. Epub 2015 Jul 22.

School of Sport, Exercise and Health Sciences, Loughborough University, Loughborough, Leicestershire, UK. Electronic address:

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http://dx.doi.org/10.1016/j.nut.2015.06.013DOI Listing
February 2016

Effect of Breakfast Omission on Energy Intake and Evening Exercise Performance.

Med Sci Sports Exerc 2015 Dec;47(12):2645-52

School of Sport, Exercise, and Health Sciences, Loughborough University, Loughborough, Leicestershire, UNITED KINGDOM.

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http://dx.doi.org/10.1249/MSS.0000000000000702DOI Listing
December 2015

Functional genomic analysis and neuroanatomical localization of miR-2954, a song-responsive sex-linked microRNA in the zebra finch.

Front Neurosci 2014 16;8:409. Epub 2014 Dec 16.

Genomics of Neural and Behavioral Plasticity Theme, Institute for Genomic Biology, University of Illinois Urbana-Champaign, IL, USA ; Department of Cell and Developmental Biology, University of Illinois Urbana-Champaign, IL, USA ; Department of Biological and Experimental Psychology, School of Biological and Chemical Sciences, Queen Mary University of London London, UK.

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http://dx.doi.org/10.3389/fnins.2014.00409DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4267206PMC
January 2015

The effect of post-exercise drink macronutrient content on appetite and energy intake.

Appetite 2014 Nov 15;82:173-9. Epub 2014 Jul 15.

School of Sport, Exercise and Health Sciences, Loughborough University, Loughborough, Leicestershire LE11 3TU, UK. Electronic address:

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http://dx.doi.org/10.1016/j.appet.2014.07.013DOI Listing
November 2014

Isolation of mitochondria from tissue culture cells.

Cold Spring Harb Protoc 2014 Oct 1;2014(10):pdb.prot080002. Epub 2014 Oct 1.

Department of Pathology, Yale University School of Medicine, New Haven, Connecticut 06520-8023; Department of Genetics, Yale University School of Medicine, New Haven, Connecticut 06520-8023.

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http://dx.doi.org/10.1101/pdb.prot080002DOI Listing
October 2014

Isolation of mitochondria from animal tissue.

Cold Spring Harb Protoc 2014 Oct 1;2014(10):pdb.prot080010. Epub 2014 Oct 1.

Department of Pathology, Yale University School of Medicine, New Haven, Connecticut 06520-8023; Department of Genetics, Yale University School of Medicine, New Haven, Connecticut 06520-8023.

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http://dx.doi.org/10.1101/pdb.prot080010DOI Listing
October 2014

Purification of mitochondria by sucrose step density gradient centrifugation.

Cold Spring Harb Protoc 2014 Oct 1;2014(10):pdb.prot080028. Epub 2014 Oct 1.

Department of Pathology, Yale University School of Medicine, New Haven, Connecticut 06520-8023; Department of Genetics, Yale University School of Medicine, New Haven, Connecticut 06520-8023.

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http://dx.doi.org/10.1101/pdb.prot080028DOI Listing
October 2014

Isolation of mitochondria from cells and tissues.

Cold Spring Harb Protoc 2014 Oct 1;2014(10):pdb.top074542. Epub 2014 Oct 1.

Department of Pathology, Pathology Research, Yale University School of Medicine, New Haven, Connecticut 06520-8023; Department of Genetics, Pathology Research, Yale University School of Medicine, New Haven, Connecticut 06520-8023.

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http://dx.doi.org/10.1101/pdb.top074542DOI Listing
October 2014

Correlative photoactivated localization and scanning electron microscopy.

PLoS One 2013 25;8(10):e77209. Epub 2013 Oct 25.

Janelia Farm Research Campus, Howard Hughes Medical Institute, Ashburn, Virginia, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0077209PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3808397PMC
August 2014

Brain transcriptome sequencing and assembly of three songbird model systems for the study of social behavior.

PeerJ 2014 22;2:e396. Epub 2014 May 22.

Division of Biological & Experimental Psychology, School of Biological and Chemical Sciences, Queen Mary University of London , London , UK.

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https://peerj.com/articles/396
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http://dx.doi.org/10.7717/peerj.396DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4034602PMC
June 2014

Effect of drink carbohydrate content on postexercise gastric emptying, rehydration, and the calculation of net fluid balance.

Int J Sport Nutr Exerc Metab 2014 Feb 26;24(1):79-89. Epub 2013 Aug 26.

School of Sport, Exercise and Health Sciences, Loughborough University, Loughborough, UK.

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http://dx.doi.org/10.1123/ijsnem.2013-0024DOI Listing
February 2014

Advancing avian behavioral neuroendocrinology through genomics.

Front Neuroendocrinol 2014 Jan 8;35(1):58-71. Epub 2013 Oct 8.

Department of Psychology, Institute for Mind and Biology, Committee on Neurobiology, University of Chicago, 940 E 57th Street, Chicago, IL, USA. Electronic address:

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http://dx.doi.org/10.1016/j.yfrne.2013.09.004DOI Listing
January 2014

The genomics of memory and learning in songbirds.

Authors:
David F Clayton

Annu Rev Genomics Hum Genet 2013 22;14:45-65. Epub 2013 Jul 22.

Biological and Experimental Psychology Division, School of Biological and Chemical Sciences, Queen Mary University of London, London E1 4NS, United Kingdom; email:

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http://dx.doi.org/10.1146/annurev-genom-090711-163809DOI Listing
December 2013

Effect of varying the concentrations of carbohydrate and milk protein in rehydration solutions ingested after exercise in the heat.

Br J Nutr 2013 Oct 31;110(7):1285-91. Epub 2013 May 31.

School of Sport, Exercise and Health Sciences, Loughborough University, Loughborough LE11 3TU, UK.

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http://dx.doi.org/10.1017/S0007114513000536DOI Listing
October 2013

Examining the role of oral contraceptive users as an experimental and/or control group in athletic performance studies.

Contraception 2013 Sep 7;88(3):408-12. Epub 2012 Dec 7.

School of Science and Technology, Nottingham Trent University, Nottingham, UK.

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http://dx.doi.org/10.1016/j.contraception.2012.11.023DOI Listing
September 2013

Brain transcriptome of the violet-eared waxbill Uraeginthus granatina and recent evolution in the songbird genome.

Open Biol 2013 Sep 4;3(9):130063. Epub 2013 Sep 4.

Department of Biology, East Carolina University, Greenville, NC 27858, USA.

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http://dx.doi.org/10.1098/rsob.130063DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3787746PMC
September 2013

Seven new loci associated with age-related macular degeneration.

Authors:
Lars G Fritsche Wei Chen Matthew Schu Brian L Yaspan Yi Yu Gudmar Thorleifsson Donald J Zack Satoshi Arakawa Valentina Cipriani Stephan Ripke Robert P Igo Gabriëlle H S Buitendijk Xueling Sim Daniel E Weeks Robyn H Guymer Joanna E Merriam Peter J Francis Gregory Hannum Anita Agarwal Ana Maria Armbrecht Isabelle Audo Tin Aung Gaetano R Barile Mustapha Benchaboune Alan C Bird Paul N Bishop Kari E Branham Matthew Brooks Alexander J Brucker William H Cade Melinda S Cain Peter A Campochiaro Chi-Chao Chan Ching-Yu Cheng Emily Y Chew Kimberly A Chin Itay Chowers David G Clayton Radu Cojocaru Yvette P Conley Belinda K Cornes Mark J Daly Baljean Dhillon Albert O Edwards Evangelos Evangelou Jesen Fagerness Henry A Ferreyra James S Friedman Asbjorg Geirsdottir Ronnie J George Christian Gieger Neel Gupta Stephanie A Hagstrom Simon P Harding Christos Haritoglou John R Heckenlively Frank G Holz Guy Hughes John P A Ioannidis Tatsuro Ishibashi Peronne Joseph Gyungah Jun Yoichiro Kamatani Nicholas Katsanis Claudia N Keilhauer Jane C Khan Ivana K Kim Yutaka Kiyohara Barbara E K Klein Ronald Klein Jaclyn L Kovach Igor Kozak Clara J Lee Kristine E Lee Peter Lichtner Andrew J Lotery Thomas Meitinger Paul Mitchell Saddek Mohand-Saïd Anthony T Moore Denise J Morgan Margaux A Morrison Chelsea E Myers Adam C Naj Yusuke Nakamura Yukinori Okada Anton Orlin M Carolina Ortube Mohammad I Othman Chris Pappas Kyu Hyung Park Gayle J T Pauer Neal S Peachey Olivier Poch Rinki Ratna Priya Robyn Reynolds Andrea J Richardson Raymond Ripp Guenther Rudolph Euijung Ryu José-Alain Sahel Debra A Schaumberg Hendrik P N Scholl Stephen G Schwartz William K Scott Humma Shahid Haraldur Sigurdsson Giuliana Silvestri Theru A Sivakumaran R Theodore Smith Lucia Sobrin Eric H Souied Dwight E Stambolian Hreinn Stefansson Gwen M Sturgill-Short Atsushi Takahashi Nirubol Tosakulwong Barbara J Truitt Evangelia E Tsironi André G Uitterlinden Cornelia M van Duijn Lingam Vijaya Johannes R Vingerling Eranga N Vithana Andrew R Webster H-Erich Wichmann Thomas W Winkler Tien Y Wong Alan F Wright Diana Zelenika Ming Zhang Ling Zhao Kang Zhang Michael L Klein Gregory S Hageman G Mark Lathrop Kari Stefansson Rando Allikmets Paul N Baird Michael B Gorin Jie Jin Wang Caroline C W Klaver Johanna M Seddon Margaret A Pericak-Vance Sudha K Iyengar John R W Yates Anand Swaroop Bernhard H F Weber Michiaki Kubo Margaret M Deangelis Thierry Léveillard Unnur Thorsteinsdottir Jonathan L Haines Lindsay A Farrer Iris M Heid Gonçalo R Abecasis

Nat Genet 2013 Apr 3;45(4):433-9, 439e1-2. Epub 2013 Mar 3.

Institute of Human Genetics, University of Regensburg, Regensburg, Germany.

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http://dx.doi.org/10.1038/ng.2578DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3739472PMC
April 2013

Noninvasive diffusive optical imaging of the auditory response to birdsong in the zebra finch.

J Comp Physiol A Neuroethol Sens Neural Behav Physiol 2013 Mar 16;199(3):227-38. Epub 2013 Jan 16.

Beckman Institute, University of Illinois at Urbana-Champaign, Champaign, USA.

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http://dx.doi.org/10.1007/s00359-012-0788-0DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4371729PMC
March 2013

RNA-seq transcriptome analysis of male and female zebra finch cell lines.

Genomics 2012 Dec 21;100(6):363-9. Epub 2012 Aug 21.

Department of Biology, East Carolina University, Greenville, NC 27858, USA.

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http://dx.doi.org/10.1016/j.ygeno.2012.08.002DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3508314PMC
December 2012

Tetanus and the evolution of intensive care in Australia.

Crit Care Resusc 2012 Dec;14(4):316-23

Royal Adelaide Hospital, Adelaide, SA.

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December 2012

Extra-binomial variation approach for analysis of pooled DNA sequencing data.

Bioinformatics 2012 Nov 12;28(22):2898-904. Epub 2012 Sep 12.

Juvenile Diabetes Research Foundation/Wellcome Trust Diabetes and Inflammation Laboratory, Department of Medical Genetics, Cambridge Institute for Medical Research, University of Cambridge, Wellcome Trust/MRC Building, Addenbrooke's Hospital, Cambridge CB2 0XY, UK.

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https://academic.oup.com/bioinformatics/article-lookup/doi/1
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http://dx.doi.org/10.1093/bioinformatics/bts553DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3496343PMC
November 2012

Impact of experience-dependent and -independent factors on gene expression in songbird brain.

Proc Natl Acad Sci U S A 2012 Oct 8;109 Suppl 2:17245-52. Epub 2012 Oct 8.

Carver Biotechnology Center and High-Performance Biological Computing Group, University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA.

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http://dx.doi.org/10.1073/pnas.1200655109DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3477375PMC
October 2012

High throughput analysis reveals dissociable gene expression profiles in two independent neural systems involved in the regulation of social behavior.

BMC Neurosci 2012 Oct 19;13:126. Epub 2012 Oct 19.

Department of Psychological and Brain Sciences, Johns Hopkins University, Baltimore, Maryland, USA.

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http://dx.doi.org/10.1186/1471-2202-13-126DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3485171PMC
October 2012

Statistical colocalization of monocyte gene expression and genetic risk variants for type 1 diabetes.

Hum Mol Genet 2012 Jun 8;21(12):2815-24. Epub 2012 Mar 8.

Juvenile Diabetes Research Foundation/Wellcome Trust Diabetes and Inflammation Laboratory, Department of Medical Genetics, University of Cambridge, Addenbrooke’s Hospital, Cambridge, UK.

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http://dx.doi.org/10.1093/hmg/dds098DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3363338PMC
June 2012

Link functions in multi-locus genetic models: implications for testing, prediction, and interpretation.

Authors:
David Clayton

Genet Epidemiol 2012 May 16;36(4):409-18. Epub 2012 Apr 16.

Juvenile Diabetes Research Foundation/Wellcome Trust Diabetes and Inflammation Laboratory, Cambridge, Institute for Medical Research, Cambridge University, United Kingdom.

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http://dx.doi.org/10.1002/gepi.21635DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3505800PMC
May 2012

Correlative 3D superresolution fluorescence and electron microscopy reveal the relationship of mitochondrial nucleoids to membranes.

Proc Natl Acad Sci U S A 2012 Apr 2;109(16):6136-41. Epub 2012 Apr 2.

Janelia Farm Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA.

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http://dx.doi.org/10.1073/pnas.1121558109DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3341004PMC
April 2012

Age-related macular degeneration: the importance of family history as a risk factor.

Br J Ophthalmol 2012 Mar 23;96(3):427-31. Epub 2011 Aug 23.

Department of Medical Genetics, Cambridge Institute for Medical Research, University of Cambridge, Cambridge, UK.

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http://dx.doi.org/10.1136/bjophthalmol-2011-300193DOI Listing
March 2012

Genetic variation in complement regulators and susceptibility to age-related macular degeneration.

Immunobiology 2012 Feb 5;217(2):158-61. Epub 2011 Oct 5.

Institute of Ophthalmology, Department of Genetics, University College London, 11-43 Bath Street, London, UK.

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http://dx.doi.org/10.1016/j.imbio.2011.09.002DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3657157PMC
February 2012

Superresolution fluorescence imaging of mitochondrial nucleoids reveals their spatial range, limits, and membrane interaction.

Mol Cell Biol 2011 Dec 17;31(24):4994-5010. Epub 2011 Oct 17.

Howard Hughes Medical Institute, Janelia Farm Research Campus, Ashburn, VA 20147, USA.

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http://dx.doi.org/10.1128/MCB.05694-11DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3233019PMC
December 2011

Small molecule analysis and imaging of fatty acids in the zebra finch song system using time-of-flight-secondary ion mass spectrometry.

J Neurochem 2011 Aug 19;118(4):499-511. Epub 2011 May 19.

Department of Cell and Developmental Biology, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801, USA.

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http://dx.doi.org/10.1111/j.1471-4159.2011.07274.xDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3137756PMC
August 2011

The Simpson's paradox unraveled.

Int J Epidemiol 2011 Jun 30;40(3):780-5. Epub 2011 Mar 30.

Department of Epidemiology, Harvard School of Public Health, Harvard-MIT Division of Health Sciences and Technology, Boston, MA 02115, USA.

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http://dx.doi.org/10.1093/ije/dyr041DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3147074PMC
June 2011

Effect of milk protein addition to a carbohydrate-electrolyte rehydration solution ingested after exercise in the heat.

Br J Nutr 2011 Feb 28;105(3):393-9. Epub 2010 Sep 28.

School of Science and Technology, Erasmus Darwin Building, Nottingham Trent University, Clifton Lane, Nottingham, Nottinghamshire NG11 8NS, UK.

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http://dx.doi.org/10.1017/S0007114510003545DOI Listing
February 2011

Molecular evolution of genes in avian genomes.

Genome Biol 2010 23;11(6):R68. Epub 2010 Jun 23.

Department of Evolutionary Biology, Evolutionary Biology Centre, Uppsala University, Norbyvägen 18D, Uppsala, S-752 36, Sweden.

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http://dx.doi.org/10.1186/gb-2010-11-6-r68DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2911116PMC
November 2010

On inferring presence of an individual in a mixture: a Bayesian approach.

Authors:
David Clayton

Biostatistics 2010 Oct 3;11(4):661-73. Epub 2010 Jun 3.

Department of Medical Genetics, Cambridge Institute for Medical Research, Cambridge University, Cambridge CB2 0XY, UK.

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http://dx.doi.org/10.1093/biostatistics/kxq035DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2950790PMC
October 2010

Approaches toward super-resolution fluorescence imaging of mitochondrial proteins using PALM.

Methods 2010 Aug 12;51(4):458-63. Epub 2010 Jan 12.

Howard Hughes Medical Institute, Janelia Farm Research Campus, 19700 Helix Drive, Ashburn, VA 20147-2408, USA.

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http://dx.doi.org/10.1016/j.ymeth.2010.01.001DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2938763PMC
August 2010

Copy number, linkage disequilibrium and disease association in the FCGR locus.

Hum Mol Genet 2010 Aug 27;19(16):3282-94. Epub 2010 May 27.

Department of Medicine, Cambridge Institute for Medical Research, University of Cambridge School of Clinical Medicine, Addenbrooke's Hospital, Hills Road, Cambridge CB2 0XY, UK.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2908468PMC
http://dx.doi.org/10.1093/hmg/ddq216DOI Listing
August 2010

Sex bias and dosage compensation in the zebra finch versus chicken genomes: general and specialized patterns among birds.

Genome Res 2010 Apr 31;20(4):512-8. Epub 2010 Mar 31.

Department of Integrative Biology and Physiology, University of California, Los Angeles, CA 90095-1606, USA.

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http://dx.doi.org/10.1101/gr.102343.109DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2847754PMC
April 2010

Genomic and neural analysis of the estradiol-synthetic pathway in the zebra finch.

BMC Neurosci 2010 Apr 1;11:46. Epub 2010 Apr 1.

Institute for Genomic Biology, University of Illinois at Urbana-Champaign, Urbana, IL, USA.

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http://dx.doi.org/10.1186/1471-2202-11-46DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2865489PMC
April 2010

The zebra finch neuropeptidome: prediction, detection and expression.

BMC Biol 2010 Apr 1;8:28. Epub 2010 Apr 1.

Department of Chemistry, University of Illinois at Urbana-Champaign, Urbana, IL 61801 USA.

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http://dx.doi.org/10.1186/1741-7007-8-28DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2873334PMC
April 2010

The genome of a songbird.

Nature 2010 Apr;464(7289):757-62

The Genome Center, Washington University School of Medicine, Campus Box 8501, 4444 Forest Park Avenue, St Louis, Missouri 63108, USA.

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http://dx.doi.org/10.1038/nature08819DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3187626PMC
April 2010

Genome-wide analysis of allelic expression imbalance in human primary cells by high-throughput transcriptome resequencing.

Hum Mol Genet 2010 Jan;19(1):122-34

Centre for Digestive Diseases, Blizard Institute of Cell and Molecular Science, Barts and The London School of Medicine and Dentistry, Queen Mary University of London, London, UK.

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http://dx.doi.org/10.1093/hmg/ddp473DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2792152PMC
January 2010

The imprinted DLK1-MEG3 gene region on chromosome 14q32.2 alters susceptibility to type 1 diabetes.

Nat Genet 2010 Jan 6;42(1):68-71. Epub 2009 Dec 6.

Juvenile Diabetes Research Foundation/Wellcome Trust Diabetes and Inflammation Laboratory, Department of Medical Genetics, Cambridge Institute for Medical Research, University of Cambridge, Addenbrooke's Hospital, Cambridge, UK.

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http://dx.doi.org/10.1038/ng.493DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2820243PMC
January 2010

Seasonal differences of gene expression profiles in song sparrow (Melospiza melodia) hypothalamus in relation to territorial aggression.

PLoS One 2009 Dec 4;4(12):e8182. Epub 2009 Dec 4.

Department of Neurobiology, Physiology, and Behavior, University of California Davis, Davis, California, United States of America.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2780717PMC
December 2009

Sex chromosomes and genetic association studies.

Authors:
David G Clayton

Genome Med 2009 Nov 24;1(11):110. Epub 2009 Nov 24.

Wellcome Trust/Juvenile Diabetes Research Foundation Diabetes and Inflammation Laboratory, Cambridge University, Department of Medical Genetics, Cambridge Institute for Medical Research, Wellcome Trust/MRC Building, Addenbrooke's Hospital, Cambridge CB2 0XY, UK.

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http://dx.doi.org/10.1186/gm110DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2808745PMC
November 2009

Habituation in songbirds.

Neurobiol Learn Mem 2009 Sep 25;92(2):183-8. Epub 2008 Oct 25.

Department of Cell and Developmental Biology, University of Illinois, Urbana-Champaign, IL 61801, USA.

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http://dx.doi.org/10.1016/j.nlm.2008.09.009DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2738998PMC
September 2009

Integrating genomes, brain and behavior in the study of songbirds.

Curr Biol 2009 Sep;19(18):R865-73

Institute for Genomic Biology, 1206 W. Gregory Ave, University of Illinois, Urbana, IL 61801, USA.

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http://dx.doi.org/10.1016/j.cub.2009.07.006DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2890260PMC
September 2009

Discrete molecular states in the brain accompany changing responses to a vocal signal.

Proc Natl Acad Sci U S A 2009 Jul 18;106(27):11364-9. Epub 2009 Jun 18.

Department of Cell and Developmental Biology, University of Illinois, Urbana-Champaign, IL 61801, USA.

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http://dx.doi.org/10.1073/pnas.0812998106DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2708759PMC
July 2009

Prediction and interaction in complex disease genetics: experience in type 1 diabetes.

Authors:
David G Clayton

PLoS Genet 2009 Jul 3;5(7):e1000540. Epub 2009 Jul 3.

Juvenile Diabetes Research Foundation/Wellcome Trust Diabetes and Inflammation Laboratory, Department of Medical Genetics, Cambridge Institute for Medical Research, Cambridge University, Cambridge, UK.

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http://dx.plos.org/10.1371/journal.pgen.1000540
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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2703795PMC
July 2009

Developmental shifts in gene expression in the auditory forebrain during the sensitive period for song learning.

Dev Neurobiol 2009 Jun;69(7):437-50

Institute for Genomic Biology, University of Illinois, Urbana-Champaign Urbana, IL 61801, USA.

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http://dx.doi.org/10.1002/dneu.20719DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2765821PMC
June 2009

Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.

Nat Genet 2009 Jun 10;41(6):703-7. Epub 2009 May 10.

Juvenile Diabetes Research Foundation/Wellcome Trust Diabetes and Inflammation Laboratory, Department of Medical Genetics, Cambridge Institute for Medical Research, University of Cambridge, Addenbrooke's Hospital, Cambridge, UK.

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http://www.nature.com/articles/ng.381
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http://dx.doi.org/10.1038/ng.381DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2889014PMC
June 2009

Statistical independence of the colocalized association signals for type 1 diabetes and RPS26 gene expression on chromosome 12q13.

Biostatistics 2009 Apr 27;10(2):327-34. Epub 2008 Nov 27.

Juveniles Diabetes Research Foundation/Wellcome Trust Diabetes and Inflammation Laboratory, Department of Medical Genetics, Cambridge Institute for Medical Research, University of Cambridge, Cambridge, UK.

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http://dx.doi.org/10.1093/biostatistics/kxn039DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2648905PMC
April 2009

Sexual differentiation of the zebra finch song system: potential roles for sex chromosome genes.

BMC Neurosci 2009 Mar 23;10:24. Epub 2009 Mar 23.

Department of Psychology & Program in Neuroscience, Michigan State University, East Lansing, MI, USA.

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http://dx.doi.org/10.1186/1471-2202-10-24DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2664819PMC
March 2009

Birdsong "transcriptomics": neurochemical specializations of the oscine song system.

PLoS One 2008 20;3(10):e3440. Epub 2008 Oct 20.

Neurological Sciences Institute, Oregon Health and Science University, Beaverton, Oregon, United States of America.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2563692PMC
January 2009

Native R-loops persist throughout the mouse mitochondrial DNA genome.

J Biol Chem 2008 Dec 5;283(52):36743-51. Epub 2008 Nov 5.

Janelia Farm Research Campus, Howard Hughes Medical Institute, Ashburn, Virginia 20147-2408, USA.

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http://dx.doi.org/10.1074/jbc.M806174200DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2605977PMC
December 2008

Shared and distinct genetic variants in type 1 diabetes and celiac disease.

N Engl J Med 2008 Dec 10;359(26):2767-77. Epub 2008 Dec 10.

Juvenile Diabetes Research Foundation-Wellcome Trust Diabetes and Inflammation Laboratory, Department of Medical Genetics, Cambridge Institute for Medical Research, University of Cambridge, Addenbrooke's Hospital, Cambridge, United Kingdom.

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http://www.nejm.org/doi/abs/10.1056/NEJMoa0807917
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http://dx.doi.org/10.1056/NEJMoa0807917DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2840835PMC
December 2008

Genes and social behavior.

Science 2008 Nov;322(5903):896-900

Department of Entomology, University of Illinois at Urbana-Champaign, 505 South Goodwin Avenue, Urbana, IL 61801, USA.

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http://dx.doi.org/10.1126/science.1159277DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3052688PMC
November 2008

Testing for association on the X chromosome.

Authors:
David Clayton

Biostatistics 2008 Oct 25;9(4):593-600. Epub 2008 Apr 25.

Cambridge Institute for Medical Research, University of Cambridge, Wellcome Trust/MRC Building, Addenbrookes's Hospital, Cambridge, UK.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2536723PMC
October 2008

A robust statistical method for case-control association testing with copy number variation.

Nat Genet 2008 Oct 7;40(10):1245-52. Epub 2008 Sep 7.

Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK.

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http://dx.doi.org/10.1038/ng.206DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2784596PMC
October 2008

PTPN22 Trp620 explains the association of chromosome 1p13 with type 1 diabetes and shows a statistical interaction with HLA class II genotypes.

Diabetes 2008 Jun 27;57(6):1730-7. Epub 2008 Feb 27.

Juvenile Diabetes Research Foundation/Wellcome Trust Diabetes and Inflammation Laboratory, Cambridge Institute for Medical Research, University of Cambridge, Addenbrooke's Hospital, Cambridge, UK.

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http://diabetes.diabetesjournals.org/cgi/doi/10.2337/db07-11
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June 2008

Natural selection in avian protein-coding genes expressed in brain.

Mol Ecol 2008 Jun 13;17(12):3008-17. Epub 2008 May 13.

Department of Evolutionary Biology, Uppsala University, Norbyvägen 18D, SE-752 36 Uppsala, Sweden.

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http://dx.doi.org/10.1111/j.1365-294X.2008.03795.xDOI Listing
June 2008

Functional identification of sensory mechanisms required for developmental song learning.

Nat Neurosci 2008 May 6;11(5):579-86. Epub 2008 Apr 6.

Institute for Genomic Biology, University of Illinois, Urbana-Champaign, 2500N IGB, MC-195, 1206 West Gregory Drive, Urbana, Illinois 61801, USA.

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http://dx.doi.org/10.1038/nn.2103DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2562764PMC
May 2008

TECHNICAL ADVANCES: A microarray for large-scale genomic and transcriptional analyses of the zebra finch (Taeniopygia guttata) and other passerines.

Mol Ecol Resour 2008 Mar;8(2):275-81

Animal Ecology, Department of Ecology, Ecology Building, Lund University, S-223 62 Lund, Sweden Microbial Ecology, Department of Ecology, Ecology Building, Lund University, S-223 62 Lund, Sweden Cell and Structural Biology, Neuroscience and Bioengineering, Beckman Institute, University of Illinois, Urbana-Champaign, IL 61801, USA Swegene Center for Integrative Biology at Lund University (SCIBLU), Department of Immunotechnology, SE-221 84 Lund, Sweden.

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http://doi.wiley.com/10.1111/j.1471-8286.2007.01979.x
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March 2008

Detecting association using epistatic information.

Genet Epidemiol 2007 Dec;31(8):894-909

London School of Hygiene and Tropical Medicine, London, United Kingdom.

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http://doi.wiley.com/10.1002/gepi.20250
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December 2007

Localization of type 1 diabetes susceptibility to the MHC class I genes HLA-B and HLA-A.

Nature 2007 Dec 14;450(7171):887-92. Epub 2007 Nov 14.

Juvenile Diabetes Research Foundation/Wellcome Trust Diabetes and Inflammation Laboratory, Department of Medical Genetics, Cambridge Institute of Medical Research, University of Cambridge, CB2 0XY, UK.

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http://dx.doi.org/10.1038/nature06406DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2703779PMC
December 2007

Association scan of 14,500 nonsynonymous SNPs in four diseases identifies autoimmunity variants.

Authors:
Paul R Burton David G Clayton Lon R Cardon Nick Craddock Panos Deloukas Audrey Duncanson Dominic P Kwiatkowski Mark I McCarthy Willem H Ouwehand Nilesh J Samani John A Todd Peter Donnelly Jeffrey C Barrett Dan Davison Doug Easton David M Evans Hin-Tak Leung Jonathan L Marchini Andrew P Morris Chris C A Spencer Martin D Tobin Antony P Attwood James P Boorman Barbara Cant Ursula Everson Judith M Hussey Jennifer D Jolley Alexandra S Knight Kerstin Koch Elizabeth Meech Sarah Nutland Christopher V Prowse Helen E Stevens Niall C Taylor Graham R Walters Neil M Walker Nicholas A Watkins Thilo Winzer Richard W Jones Wendy L McArdle Susan M Ring David P Strachan Marcus Pembrey Gerome Breen David St Clair Sian Caesar Katharine Gordon-Smith Lisa Jones Christine Fraser Elaine K Green Detelina Grozeva Marian L Hamshere Peter A Holmans Ian R Jones George Kirov Valentina Moskivina Ivan Nikolov Michael C O'Donovan Michael J Owen David A Collier Amanda Elkin Anne Farmer Richard Williamson Peter McGuffin Allan H Young I Nicol Ferrier Stephen G Ball Anthony J Balmforth Jennifer H Barrett Timothy D Bishop Mark M Iles Azhar Maqbool Nadira Yuldasheva Alistair S Hall Peter S Braund Richard J Dixon Massimo Mangino Suzanne Stevens John R Thompson Francesca Bredin Mark Tremelling Miles Parkes Hazel Drummond Charles W Lees Elaine R Nimmo Jack Satsangi Sheila A Fisher Alastair Forbes Cathryn M Lewis Clive M Onnie Natalie J Prescott Jeremy Sanderson Christopher G Matthew Jamie Barbour M Khalid Mohiuddin Catherine E Todhunter John C Mansfield Tariq Ahmad Fraser R Cummings Derek P Jewell John Webster Morris J Brown Mark G Lathrop John Connell Anna Dominiczak Carolina A Braga Marcano Beverley Burke Richard Dobson Johannie Gungadoo Kate L Lee Patricia B Munroe Stephen J Newhouse Abiodun Onipinla Chris Wallace Mingzhan Xue Mark Caulfield Martin Farrall Anne Barton Ian N Bruce Hannah Donovan Steve Eyre Paul D Gilbert Samantha L Hilder Anne M Hinks Sally L John Catherine Potter Alan J Silman Deborah P M Symmons Wendy Thomson Jane Worthington David B Dunger Barry Widmer Timothy M Frayling Rachel M Freathy Hana Lango John R B Perry Beverley M Shields Michael N Weedon Andrew T Hattersley Graham A Hitman Mark Walker Kate S Elliott Christopher J Groves Cecilia M Lindgren Nigel W Rayner Nicolas J Timpson Eleftheria Zeggini Melanie Newport Giorgio Sirugo Emily Lyons Fredrik Vannberg Adrian V S Hill Linda A Bradbury Claire Farrar Jennifer J Pointon Paul Wordsworth Matthew A Brown Jayne A Franklyn Joanne M Heward Matthew J Simmonds Stephen C L Gough Sheila Seal Michael R Stratton Nazneen Rahman Maria Ban An Goris Stephen J Sawcer Alastair Compston David Conway Muminatou Jallow Melanie Newport Giorgio Sirugo Kirk A Rockett Suzannah J Bumpstead Amy Chaney Kate Downes Mohammed J R Ghori Rhian Gwilliam Sarah E Hunt Michael Inouye Andrew Keniry Emma King Ralph McGinnis Simon Potter Rathi Ravindrarajah Pamela Whittaker Claire Widden David Withers Niall J Cardin Dan Davison Teresa Ferreira Joanne Pereira-Gale Ingeleif B Hallgrimsdo'ttir Bryan N Howie Zhan Su Yik Ying Teo Damjan Vukcevic David Bentley Matthew A Brown Alastair Compston Martin Farrall Alistair S Hall Andrew T Hattersley Adrian V S Hill Miles Parkes Marcus Pembrey Michael R Stratton Sarah L Mitchell Paul R Newby Oliver J Brand Jackie Carr-Smith Simon H S Pearce R McGinnis A Keniry P Deloukas John D Reveille Xiaodong Zhou Anne-Marie Sims Alison Dowling Jacqueline Taylor Tracy Doan John C Davis Laurie Savage Michael M Ward Thomas L Learch Michael H Weisman Mathew Brown

Nat Genet 2007 Nov 21;39(11):1329-37. Epub 2007 Oct 21.

Genetic Epidemiology Group, Department of Health Sciences, University of Leicester, Adrian Building, University Road, Leicester LE1 7RH, UK.

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http://dx.doi.org/10.1038/ng.2007.17DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2680141PMC
November 2007

SENSE phase-constrained magnitude reconstruction with iterative phase refinement.

Magn Reson Med 2007 Nov;58(5):910-21

Lucas MRS/I Center, Stanford University, Stanford, California 94035, USA.

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http://dx.doi.org/10.1002/mrm.21284DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3985730PMC
November 2007

Large-scale genetic fine mapping and genotype-phenotype associations implicate polymorphism in the IL2RA region in type 1 diabetes.

Nat Genet 2007 Sep 5;39(9):1074-82. Epub 2007 Aug 5.

Juvenile Diabetes Research Foundation/Wellcome Trust Diabetes and Inflammation Laboratory, Department of Medical Genetics, Cambridge Institute for Medical Research, University of Cambridge, Addenbrooke's Hospital, UK.

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http://www.nature.com/doifinder/10.1038/ng2102
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September 2007

Complement C3 variant and the risk of age-related macular degeneration.

N Engl J Med 2007 Aug 18;357(6):553-61. Epub 2007 Jul 18.

Department of Medical Genetics, Cambridge Institute for Medical Research, University of Cambridge, Addenbrooke's Hospital, Cambridge, United Kingdom.

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http://dx.doi.org/10.1056/NEJMoa072618DOI Listing
August 2007