David C Plachetzki

David C Plachetzki

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David C Plachetzki

David C Plachetzki

Publications by authors named "David C Plachetzki"

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23Publications

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The N termini of the inhibitory γ-subunits of phosphodiesterase-6 (PDE6) from rod and cone photoreceptors differentially regulate transducin-mediated PDE6 activation.

J Biol Chem 2019 05 8;294(21):8351-8360. Epub 2019 Apr 8.

From the Department of Molecular, Cellular, and Biomedical Sciences, University of New Hampshire, Durham, New Hampshire 03824

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http://dx.doi.org/10.1074/jbc.RA119.007520DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6544851PMC
May 2019

A mosaic of independent innovations involving eyes shut are critical for the evolutionary transition from fused to open rhabdoms.

Dev Biol 2018 11 19;443(2):188-202. Epub 2018 Sep 19.

Department of Biology, Indiana University, Bloomington, IN 47405, USA. Electronic address:

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http://dx.doi.org/10.1016/j.ydbio.2018.09.016DOI Listing
November 2018

Comparative Genomics of Pathogenic and Nonpathogenic Beetle-Vectored Fungi in the Genus Geosmithia.

Genome Biol Evol 2017 12;9(12):3312-3327

Department of Molecular, Cellular, & Biomedical Sciences, University of New Hampshire.

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http://dx.doi.org/10.1093/gbe/evx242DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5737690PMC
December 2017

Ancient origins of metazoan gonadotropin-releasing hormone and their receptors revealed by phylogenomic analyses.

Gen Comp Endocrinol 2016 08 16;234:10-9. Epub 2016 Jun 16.

Department of Molecular, Cellular and Biomedical Sciences, University of New Hampshire, Durham, NH 03824, USA.

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http://dx.doi.org/10.1016/j.ygcen.2016.06.007DOI Listing
August 2016

Extracting phylogenetic signal and accounting for bias in whole-genome data sets supports the Ctenophora as sister to remaining Metazoa.

BMC Genomics 2015 Nov 23;16:987. Epub 2015 Nov 23.

Department of Molecular, Cellular, and Biomedical Sciences, University of New Hampshire, Durham, USA.

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http://dx.doi.org/10.1186/s12864-015-2146-4DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4657218PMC
November 2015

The utility of shallow RNA-Seq for documenting differential gene expression in genes with high and low levels of expression.

PLoS One 2013 16;8(12):e84160. Epub 2013 Dec 16.

Department of Entomology, University of California Davis, Davis, California, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0084160PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3865247PMC
September 2014

A critical appraisal of the use of microRNA data in phylogenetics.

Proc Natl Acad Sci U S A 2014 Sep 28;111(35):E3659-68. Epub 2014 Jul 28.

Department of Evolution and Ecology, University of California, Davis, CA 95616.

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http://dx.doi.org/10.1073/pnas.1407207111DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4156711PMC
September 2014

Gene co-expression modules underlying polymorphic and monomorphic zooids in the colonial hydrozoan, Hydractinia symbiolongicarpus.

Integr Comp Biol 2014 Jul 15;54(2):276-83. Epub 2014 Jun 15.

*Department of Molecular, Cellular and Biomedical Sciences, The University of New Hampshire, Durham, NH 03801, USA; Department of Ecology Evolution and Marine Biology, The University of California at Santa Barbara, Santa Barbara, CA 93106, USA; Department of Entomology, The University of California at Davis, Davis, CA 95616, USA; Department of Evolution and Ecology, Center for Population Biology, The University of California at Davis, Davis, CA 95616, USA.

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http://dx.doi.org/10.1093/icb/icu080DOI Listing
July 2014

Pan-metazoan phylogeny of the DMRT gene family: a framework for functional studies.

Dev Genes Evol 2014 Jun 6;224(3):175-81. Epub 2014 Jun 6.

Center for Population Biology, Department of Evolution and Ecology, University of California, One Shields Ave, Davis, CA, 95616, USA,

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http://dx.doi.org/10.1007/s00427-014-0473-0DOI Listing
June 2014

The importance of tissue specificity for RNA-seq: highlighting the errors of composite structure extractions.

BMC Genomics 2013 Aug 28;14:586. Epub 2013 Aug 28.

Department of Entomology, University of California, Davis, 1 Shields Ave, Davis, CA 95616, USA.

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http://dx.doi.org/10.1186/1471-2164-14-586DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3765781PMC
August 2013

Blue-light-receptive cryptochrome is expressed in a sponge eye lacking neurons and opsin.

J Exp Biol 2012 Apr;215(Pt 8):1278-86

Department of Biological Sciences, University of the Pacific, Stockton, CA 95211, USA.

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http://dx.doi.org/10.1242/jeb.067140DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3309880PMC
April 2012

Cnidocyte discharge is regulated by light and opsin-mediated phototransduction.

BMC Biol 2012 Mar 5;10:17. Epub 2012 Mar 5.

Center for Population Biology, University of California at Davis, One Shields Avenue, Davis, CA 95616, USA.

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http://dx.doi.org/10.1186/1741-7007-10-17DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3329406PMC
March 2012

The evolution of phototransduction from an ancestral cyclic nucleotide gated pathway.

Proc Biol Sci 2010 Jul 10;277(1690):1963-9. Epub 2010 Mar 10.

Department of Ecology, Evolution and Marine Biology, University of California at Santa Barbara, Santa Barbara, CA 93106, USA.

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http://dx.doi.org/10.1098/rspb.2009.1797DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2880087PMC
July 2010

Isolation and expression of Pax6 and atonal homologues in the American horseshoe crab, Limulus polyphemus.

Dev Dyn 2008 Aug;237(8):2209-19

Museum of Comparative Zoology and Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, Massachusetts, USA.

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http://dx.doi.org/10.1002/dvdy.21634DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2577597PMC
August 2008

Furcation, field-splitting, and the evolutionary origins of novelty in arthropod photoreceptors.

Arthropod Struct Dev 2007 Dec 11;36(4):386-400. Epub 2007 Sep 11.

Ecology Evolution and Marine Biology, University of California-Santa Barbara, Santa Barbara, CA 93106, USA.

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http://dx.doi.org/10.1016/j.asd.2007.08.002DOI Listing
December 2007

Key transitions during the evolution of animal phototransduction: novelty, "tree-thinking," co-option, and co-duplication.

Integr Comp Biol 2007 Nov 22;47(5):759-69. Epub 2007 Jun 22.

Ecology, Evolution and Marine Biology. The University of California-Santa Barbara, CA 93106.

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https://academic.oup.com/icb/article-lookup/doi/10.1093/icb/
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http://dx.doi.org/10.1093/icb/icm050DOI Listing
November 2007

The origins of novel protein interactions during animal opsin evolution.

PLoS One 2007 Oct 17;2(10):e1054. Epub 2007 Oct 17.

Ecology, Evolution and Marine Biology, University of California at Santa Barbara, Santa Barbara, California, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0001054PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2013938PMC
October 2007

New insights into the evolutionary history of photoreceptor cells.

Trends Ecol Evol 2005 Sep 18;20(9):465-7. Epub 2005 Jul 18.

University of California-Santa Barbara, Ecology, Evolution and Marine Biology, Santa Barbara, CA 93106, USA.

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http://dx.doi.org/10.1016/j.tree.2005.07.001DOI Listing
September 2005

NOVOcan: a molecular link among selected glial cells.

Biophys Chem 2004 Mar;108(1-3):245-58

Department of Neurology, Brain Research Institute, The University of Chicago, Chicago, IL 60637, USA.

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http://dx.doi.org/10.1016/j.bpc.2003.10.026DOI Listing
March 2004

Oligodendrocytes express an alpha/beta-interferon-susceptible Mx gene: molecular characterization of the encoded protein.

Glia 2002 Feb;37(2):183-9

Department of Neurology and the Brain Research Institute, University of Chicago, Chicago, Illinois 60637, USA.

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http://dx.doi.org/10.1002/glia.10027DOI Listing
February 2002