Dave Speijer

Dave Speijer

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Why Does the Web Seem to Bring Out the Best in Science but the Worst in Politics?

Authors:
Dave Speijer

Bioessays 2019 Oct 3;41(10):e1900134. Epub 2019 Sep 3.

Department of Medical Biochemistry, Amsterdam UMC, University of Amsterdam, Meibergdreef 15, 1105 AZ, Amsterdam, The Netherlands.

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http://dx.doi.org/10.1002/bies.201900134DOI Listing
October 2019

On the Likelihood of Life Originating.

Authors:
Dave Speijer

Bioessays 2019 Sep 12;41(9):e1900085. Epub 2019 Jul 12.

Department of Medical Biochemistry, Amsterdam UMC, University of Amsterdam, Meibergdreef 15, 1105 AZ, Amsterdam, The Netherlands.

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http://dx.doi.org/10.1002/bies.201900085DOI Listing
September 2019

We Should Not Use the Term "Lamarckian" as It Is Often Used in Opposition to "Darwinian".

Authors:
Dave Speijer

Bioessays 2019 Sep 16;41(9):e1900092. Epub 2019 Jul 16.

Department of Medical Biochemistry, Amsterdam UMC, University of Amsterdam, Meibergdreef 15, 1105 AZ, Amsterdam, The Netherlands.

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http://dx.doi.org/10.1002/bies.201900092DOI Listing
September 2019

Visualizing Proteasome Activity and Intracellular Localization Using Fluorescent Proteins and Activity-Based Probes.

Front Mol Biosci 2019 20;6:56. Epub 2019 Aug 20.

Department of Medical Biology, Academic Medical Center, University of Amsterdam, Amsterdam, Netherlands.

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http://dx.doi.org/10.3389/fmolb.2019.00056DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6710370PMC
August 2019

Stop the Assault on Truth.

Authors:
Dave Speijer

Bioessays 2019 Jul 19;41(7):e1900082. Epub 2019 Jun 19.

Medical Biochemistry, Amsterdam UMC, University of Amsterdam, Meibergdreef 15, 1105 AZ, Amsterdam, The Netherlands.

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http://dx.doi.org/10.1002/bies.201900082DOI Listing
July 2019

Let's Stop the Sloppy Use of "Lamarckian".

Authors:
Dave Speijer

Bioessays 2019 02 7;41(2):e1800258. Epub 2019 Jan 7.

D. Speijer, Academic Medical Center (AMC), University of Amsterdam, Medical Biochemistry, Meibergdreef 15, 1105 AZ, Amsterdam, The Netherlands.

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http://dx.doi.org/10.1002/bies.201800258DOI Listing
February 2019

Can All Major ROS Forming Sites of the Respiratory Chain Be Activated By High FADH /NADH Ratios?: Ancient evolutionary constraints determine mitochondrial ROS formation.

Authors:
Dave Speijer

Bioessays 2019 01 4;41(1):e1800180. Epub 2018 Dec 4.

Academic Medical Center (AMC), University of Amsterdam, Medical Biochemistry, Room K1-257, 1105, AZ Amsterdam, The Netherlands.

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http://doi.wiley.com/10.1002/bies.201800180
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http://dx.doi.org/10.1002/bies.201800180DOI Listing
January 2019

A Defective Pentose Phosphate Pathway Reduces Inflammatory Macrophage Responses during Hypercholesterolemia.

Cell Rep 2018 11;25(8):2044-2052.e5

Amsterdam UMC, University of Amsterdam, Department of Medical Biochemistry, Experimental Vascular Biology, Amsterdam Cardiovascular Sciences, Meibergdreef 9, 1105 AZ Amsterdam, the Netherlands; Amsterdam UMC, Vrije Universiteit Amsterdam, Department of Molecular Cell Biology and Immunology, Amsterdam Cardiovascular Sciences, Cancer Center Amsterdam, De Boelelaan 1117, 1081 HZ Amsterdam, the Netherlands. Electronic address:

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http://dx.doi.org/10.1016/j.celrep.2018.10.092DOI Listing
November 2018

Response to Ghiselli F (2018).

Authors:
Dave Speijer

Philos Trans R Soc Lond B Biol Sci 2018 03;373(1741)

Department of Medical Biochemistry, Academic Medical Center (AMC), University of Amsterdam, Meibergdreef 15, 1105 AZ Amsterdam, The Netherlands

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http://dx.doi.org/10.1098/rstb.2017.0278DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5784076PMC
March 2018

Impact Factors, Reads and Real Values.

Authors:
Dave Speijer

Bioessays 2018 03 13;40(3). Epub 2018 Feb 13.

Medical Biochemistry, Academic Medical Center (AMC), University of Amsterdam, Amsterdam, The Netherlands.

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http://dx.doi.org/10.1002/bies.201800014DOI Listing
March 2018

How oxygen gave rise to eukaryotic sex.

Proc Biol Sci 2018 02;285(1872)

Department of Medical Biochemistry, Academic Medical Centre (AMC), University of Amsterdam, Amsterdam, The Netherlands

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http://dx.doi.org/10.1098/rspb.2017.2706DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5829205PMC
February 2018

Evolution of peroxisomes illustrates symbiogenesis.

Authors:
Dave Speijer

Bioessays 2017 09 7;39(9). Epub 2017 Aug 7.

Medical Biochemistry, Academic Medical Center (AMC), University of Amsterdam, Amsterdam, The Netherlands.

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http://dx.doi.org/10.1002/bies.201700050DOI Listing
September 2017

Regulation of cytochrome components by NrrF, a Fur-controlled small noncoding RNA.

FEBS Open Bio 2017 09 5;7(9):1302-1315. Epub 2017 Aug 5.

Department of Medical Microbiology Center for Infection and Immunity Amsterdam (CINIMA) Academic Medical Center The Netherlands.

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http://dx.doi.org/10.1002/2211-5463.12266DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5586341PMC
September 2017

Unmiraculous? Yes. Ancient? Probably not. (Response to DOI 10.1002/bies.201700041).

Authors:
Dave Speijer

Bioessays 2017 06 2;39(6). Epub 2017 May 2.

Medical Biochemistry, Academic Medical Center (AMC), University of Amsterdam, Amsterdam, The Netherlands.

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http://dx.doi.org/10.1002/bies.201700048DOI Listing
June 2017

The Hfq regulon of .

FEBS Open Bio 2017 06 25;7(6):777-788. Epub 2017 Apr 25.

Department of Medical Microbiology Center of Infection and Immunity Amsterdam (CINIMA) Academic Medical Center Amsterdam The Netherlands.

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http://dx.doi.org/10.1002/2211-5463.12218DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5458458PMC
June 2017

Uses Sibling Small Regulatory RNAs To Switch from Cataplerotic to Anaplerotic Metabolism.

MBio 2017 03 21;8(2). Epub 2017 Mar 21.

Department of Medical Microbiology, Center for Infection and Immunity (CINIMA), Academic Medical Center, Amsterdam, The Netherlands.

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http://dx.doi.org/10.1128/mBio.02293-16DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5362039PMC
March 2017

Alternating terminal electron-acceptors at the basis of symbiogenesis: How oxygen ignited eukaryotic evolution.

Authors:
Dave Speijer

Bioessays 2017 02 5;39(2). Epub 2017 Jan 5.

Department of Medical Biochemistry, Academic Medical Centre (AMC), University of Amsterdam, Amsterdam, The Netherlands.

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http://dx.doi.org/10.1002/bies.201600174DOI Listing
February 2017

Being right on Q: shaping eukaryotic evolution.

Authors:
Dave Speijer

Biochem J 2016 11;473(22):4103-4127

Medical Biochemistry, Academic Medical Center, University of Amsterdam, Meibergdreef 15, 1105 AZ Amsterdam, The Netherlands.

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http://dx.doi.org/10.1042/BCJ20160647DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5103874PMC
November 2016

What can we infer about the origin of sex in early eukaryotes?

Authors:
Dave Speijer

Philos Trans R Soc Lond B Biol Sci 2016 10;371(1706)

Department of Medical Biochemistry, Academic Medical Center (AMC), University of Amsterdam, Meibergdreef 15, 1105 AZ Amsterdam, The Netherlands

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http://dx.doi.org/10.1098/rstb.2015.0530DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5031615PMC
October 2016

Non-SMC Element 2 (NSMCE2) of the SMC5/6 Complex Helps to Resolve Topological Stress.

Int J Mol Sci 2016 Oct 26;17(11). Epub 2016 Oct 26.

Center for Reproductive Medicine, Amsterdam Research Institute Reproduction and Development, Academic Medical Center, University of Amsterdam, 1105 AZ Amsterdam, The Netherlands.

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http://www.mdpi.com/1422-0067/17/11/1782
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http://dx.doi.org/10.3390/ijms17111782DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5133783PMC
October 2016

Altered Loyalties of Neuronal Markers in Cultured Slices of Resected Human Brain Tissue.

Brain Pathol 2016 07 7;26(4):523-32. Epub 2015 Dec 7.

Department of Neuropsychiatric Disorders, Netherlands Institute for Neuroscience, Royal Netherlands Academy of Arts and Sciences (KNAW), Amsterdam, The Netherlands.

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http://dx.doi.org/10.1111/bpa.12330DOI Listing
July 2016

Sex is a ubiquitous, ancient, and inherent attribute of eukaryotic life.

Proc Natl Acad Sci U S A 2015 Jul;112(29):8827-34

Department of Biology and Ecology, University of Ostrava, 710 00 Ostrava, Czech Republic

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http://dx.doi.org/10.1073/pnas.1501725112DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4517231PMC
July 2015

Birth of the eukaryotes by a set of reactive innovations: New insights force us to relinquish gradual models.

Authors:
Dave Speijer

Bioessays 2015 Dec;37(12):1268-76

Department of Medical Biochemistry, Academic Medical Centre (AMC), University of Amsterdam, Amsterdam, The Netherlands.

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http://dx.doi.org/10.1002/bies.201500107DOI Listing
December 2015

Injury Response of Resected Human Brain Tissue In Vitro.

Brain Pathol 2015 Jul 4;25(4):454-68. Epub 2014 Nov 4.

Netherlands Institute for Neuroscience, Royal Netherlands Academy of Arts and Sciences (KNAW), Amsterdam, The Netherlands.

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http://dx.doi.org/10.1111/bpa.12189DOI Listing
July 2015

Sex is a ubiquitous, ancient, and inherent attribute of eukaryotic life.

Proc Natl Acad Sci U S A 2015 Jul;112(29):8827-34

Department of Biology and Ecology, University of Ostrava, 710 00 Ostrava, Czech Republic

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http://dx.doi.org/10.1073/pnas.1501725112DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4517231PMC
July 2015

Dendritic cell type-specific HIV-1 activation in effector T cells: implications for latent HIV-1 reservoir establishment.

AIDS 2015 Jun;29(9):1003-14

aLaboratory of Experimental Virology, Department of Medical Microbiology, Centre for Infection and Immunity Amsterdam (CINIMA) bDepartment of Cell Biology and Histology, Center for Immunology Amsterdam (CIA) cDepartment of Medical Biochemistry, Academic Medical Center, University of Amsterdam, Amsterdam, the Netherlands dDepartment of Microbiology and Immunology, Weill Medical College of Cornell University, New York, USA.

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http://dx.doi.org/10.1097/QAD.0000000000000637DOI Listing
June 2015

Superior in vivo compatibility of hydrophilic polymer coated prosthetic vascular grafts.

J Vasc Access 2014 Mar-Apr;15(2):95-101. Epub 2013 Oct 9.

Department of Vascular Medicine, Academic Medical Center/University of Amsterdam, Amsterdam - The Netherlands.

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http://dx.doi.org/10.5301/jva.5000166DOI Listing
January 2015

How amino acids and peptides shaped the RNA world.

Life (Basel) 2015 Jan 19;5(1):230-46. Epub 2015 Jan 19.

Department of Medical Biochemistry, Academic Medical Center, University of Amsterdam, Meibergdreef 15, 1105 AZ Amsterdam, The Netherlands.

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http://dx.doi.org/10.3390/life5010230DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4390850PMC
January 2015

Candidate prioritization for low-abundant differentially expressed proteins in 2D-DIGE datasets.

BMC Bioinformatics 2015 Jan 28;16:25. Epub 2015 Jan 28.

Bioinformatics Laboratory, Academic Medical Center, University of Amsterdam, PO Box 22700, DE Amsterdam, 1100, The Netherlands.

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http://dx.doi.org/10.1186/s12859-015-0455-xDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4384356PMC
January 2015

Reconsidering ideas regarding the evolution of peroxisomes: the case for a mitochondrial connection.

Authors:
Dave Speijer

Cell Mol Life Sci 2014 Jul 1;71(13):2377-8. Epub 2013 Nov 1.

Medical Biochemistry, AMC, University of Amsterdam, Meibergdreef 15, 1105 AZ, Amsterdam, The Netherlands,

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http://dx.doi.org/10.1007/s00018-013-1507-xDOI Listing
July 2014

How the mitochondrion was shaped by radical differences in substrates: what carnitine shuttles and uncoupling tell us about mitochondrial evolution in response to ROS.

Authors:
Dave Speijer

Bioessays 2014 Jul 21;36(7):634-43. Epub 2014 May 21.

Academic Medical Centre (AMC), University of Amsterdam, Department of Medical Biochemistry, Amsterdam, The Netherlands.

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http://dx.doi.org/10.1002/bies.201400033DOI Listing
July 2014

The road to rack and ruin: selecting deleterious mitochondrial DNA variants.

Philos Trans R Soc Lond B Biol Sci 2014 Jul;369(1646):20130451

Institute for Ageing and Health, Newcastle University, Campus for Ageing and Vitality, Newcastle upon Tyne NE4 5PL, UK.

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http://dx.doi.org/10.1098/rstb.2013.0451DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4032523PMC
July 2014

Interplay between viral Tat protein and c-Jun transcription factor in controlling LTR promoter activity in different human immunodeficiency virus type I subtypes.

J Gen Virol 2014 Apr 21;95(Pt 4):968-79. Epub 2014 Jan 21.

Laboratory of Experimental Virology, Department of Medical Microbiology, Centre for Infection and Immunity Amsterdam (CINIMA), Academic Medical Centre, University of Amsterdam, Meibergdreef 15, 1105 AZ Amsterdam, The Netherlands.

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http://dx.doi.org/10.1099/vir.0.059642-0DOI Listing
April 2014

A realistic model under which the genetic code is optimal.

J Mol Evol 2013 Oct 23;77(4):170-84. Epub 2013 Jul 23.

Centrum Wiskunde & Informatica (CWI), P.O. Box 94079, 1090 GB, Amsterdam, The Netherlands.

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http://dx.doi.org/10.1007/s00239-013-9571-2DOI Listing
October 2013

Dendritic cell-induced activation of latent HIV-1 provirus in actively proliferating primary T lymphocytes.

PLoS Pathog 2013 Mar 21;9(3):e1003259. Epub 2013 Mar 21.

Laboratory of Experimental Virology, Department of Medical Microbiology, Centre for Infection and Immunity Amsterdam, Academic Medical Centre, University of Amsterdam, Amsterdam, The Netherlands.

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http://dx.doi.org/10.1371/journal.ppat.1003259DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3605277PMC
March 2013

Penetrating insights?

Authors:
Dave Speijer

Front Microbiol 2012 31;3:382. Epub 2012 Oct 31.

Department of Medical Biochemistry, Academic Medical Center, University of Amsterdam Amsterdam, Netherlands.

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http://dx.doi.org/10.3389/fmicb.2012.00382DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3484405PMC
November 2012

Proteomic analysis of HIV-T cell interaction: an update.

Front Microbiol 2012 4;3:240. Epub 2012 Jul 4.

Department of Medical Biochemistry, Academic Medical Center, University of Amsterdam, Amsterdam, Netherlands.

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http://dx.doi.org/10.3389/fmicb.2012.00240DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3389432PMC
October 2012

Brains have a gut feeling about fat storage: an overall inverse correlation between fat deposits and brain size in mammals is explained by neurons not burning fat.

Authors:
Dave Speijer

Bioessays 2012 Apr 15;34(4):275-6. Epub 2012 Feb 15.

Academic Medical Center (AMC), University of Amsterdam, Medical Biochemistry, Amsterdam, The Netherlands.

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http://dx.doi.org/10.1002/bies.201200002DOI Listing
April 2012

Does constructive neutral evolution play an important role in the origin of cellular complexity? Making sense of the origins and uses of biological complexity.

Authors:
Dave Speijer

Bioessays 2011 May 7;33(5):344-9. Epub 2011 Mar 7.

Academic Medical Center (AMC), Department of Medical Biochemistry, University of Amsterdam, Amsterdam, The Netherlands.

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http://dx.doi.org/10.1002/bies.201100010DOI Listing
May 2011

The cytosolic β-glucosidase GBA3 does not influence type 1 Gaucher disease manifestation.

Blood Cells Mol Dis 2011 Jan 21;46(1):19-26. Epub 2010 Aug 21.

Department of Medical Biochemistry, Academic Medical Center, University of Amsterdam, Meibergdreef 15, 1105 AZ Amsterdam, The Netherlands.

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https://linkinghub.elsevier.com/retrieve/pii/S10799796100018
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http://dx.doi.org/10.1016/j.bcmd.2010.07.009DOI Listing
January 2011

Proteome-wide alterations in Escherichia coli translation rates upon anaerobiosis.

Mol Cell Proteomics 2010 Nov 16;9(11):2508-16. Epub 2010 Aug 16.

Mass Spectrometry of Biomacromoleculesm, Swammerdam Institute for Life Sciences, Universiteit van Amsterdam, Kruislaan 904, Amsterdam, The Netherlands.

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http://dx.doi.org/10.1074/mcp.M110.001826DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2984242PMC
November 2010

How honey kills bacteria.

FASEB J 2010 Jul 12;24(7):2576-82. Epub 2010 Mar 12.

Department of Medical Microbiology, Academic Medical Center, University of Amsterdam, 1105 AZ Amsterdam, The Netherlands.

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http://dx.doi.org/10.1096/fj.09-150789DOI Listing
July 2010

Identification of a novel anti-sigmaE factor in Neisseria meningitidis.

BMC Microbiol 2010 Jun 4;10:164. Epub 2010 Jun 4.

Academic Medical Center, Center for Infection and Immunity Amsterdam (CINIMA), Department of Medical Microbiology, Amsterdam, the Netherlands.

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http://dx.doi.org/10.1186/1471-2180-10-164DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2893595PMC
June 2010

Constructive neutral evolution cannot explain current kinetoplastid panediting patterns.

Authors:
Dave Speijer

Proc Natl Acad Sci U S A 2010 Feb 9;107(7):E25; author reply E26. Epub 2010 Feb 9.

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http://dx.doi.org/10.1073/pnas.0909867107DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2840355PMC
February 2010

Proteomic profiling of plasma and serum in elderly patients with delirium.

J Neuropsychiatry Clin Neurosci 2009 ;21(3):284-91

Department of Clinical Epidemiology, Biostatistics and Bioinformatics, University of Amsterdam, Amsterdam, The Netherlands.

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http://psychiatryonline.org/doi/abs/10.1176/jnp.2009.21.3.28
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http://dx.doi.org/10.1176/jnp.2009.21.3.284DOI Listing
December 2009

Specific human astrocyte subtype revealed by affinity purified GFAP antibody; unpurified serum cross-reacts with neurofilament-L in Alzheimer.

PLoS One 2009 Nov 4;4(11):e7663. Epub 2009 Nov 4.

Department of Astrocyte Biology & Neurodegeneration, Netherlands Institute for Neuroscience, Royal Netherlands Academy of Arts and Sciences, Amsterdam, The Netherlands.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0007663PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2766629PMC
November 2009

Mucin 6 in seminal plasma binds DC-SIGN and potently blocks dendritic cell mediated transfer of HIV-1 to CD4(+) T-lymphocytes.

Virology 2009 Sep;391(2):203-11

Laboratory of Experimental Virology, Department of Medical Microbiology, Center for Infection and Immunity Amsterdam, Academic Medical Center of the University of Amsterdam, Meibergdreef 15, 1105 AZ Amsterdam, The Netherlands.

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http://dx.doi.org/10.1016/j.virol.2009.06.011DOI Listing
September 2009

Gaucher disease: a model disorder for biomarker discovery.

Expert Rev Proteomics 2009 Aug;6(4):411-9

Department of Medical Biochemistry, Academic Medical Center, University of Amsterdam, Meibergdreef 15, 1105 AZ Amsterdam, The Netherlands.

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http://dx.doi.org/10.1586/epr.09.54DOI Listing
August 2009

Potential artefacts in proteome analysis of plasma of Gaucher patients due to protease abnormalities.

Clin Chim Acta 2008 Oct 25;396(1-2):26-32. Epub 2008 Jun 25.

Department of Medical Biochemistry, Academic Medical Center, University of Amsterdam, Amsterdam, The Netherlands.

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http://dx.doi.org/10.1016/j.cca.2008.06.018DOI Listing
October 2008

Intragenomic variation in the internal transcribed spacer 1 region of Dientamoeba fragilis as a molecular epidemiological marker.

J Clin Microbiol 2008 Oct 23;46(10):3270-5. Epub 2008 Jul 23.

Section Parasitology, Department of Medical Microbiology, Academic Medical Center, University of Amsterdam, Meibergdreef 9, Amsterdam 1105 AZ, The Netherlands.

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http://dx.doi.org/10.1128/JCM.00680-08DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2566099PMC
October 2008

Proteomic studies reveal coordinated changes in T-cell expression patterns upon infection with human immunodeficiency virus type 1.

J Virol 2008 May 20;82(9):4320-30. Epub 2008 Feb 20.

K1-262, Academic Medical Center, University of Amsterdam, Clinical Proteomics Group, Medical Biochemistry, Meibergdreef 15, 1105 AZ Amsterdam, The Netherlands.

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http://dx.doi.org/10.1128/JVI.01819-07DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2293043PMC
May 2008

Making sense of scrambled genomes.

Authors:
Dave Speijer

Science 2008 Feb;319(5865):901-2; author reply 901-2

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http://dx.doi.org/10.1126/science.319.5865.901aDOI Listing
February 2008

TLR- and NOD2-dependent regulation of human phagocyte-specific chitotriosidase.

FEBS Lett 2007 Nov 30;581(28):5389-95. Epub 2007 Oct 30.

Department of Medical Biochemistry, University of Amsterdam, Academic Medical Center, 1100 DE Amsterdam, The Netherlands.

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http://dx.doi.org/10.1016/j.febslet.2007.10.039DOI Listing
November 2007

Evolution of mammalian chitinase(-like) members of family 18 glycosyl hydrolases.

Genetics 2007 Oct 24;177(2):959-70. Epub 2007 Aug 24.

Department of Medical Biochemistry, Academic Medical Center, University of Amsterdam, 1105 AZ Amsterdam, The Netherlands.

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http://dx.doi.org/10.1534/genetics.107.075846DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2034658PMC
October 2007

The mixed xylem sap proteome of Fusarium oxysporum-infected tomato plants.

Mol Plant Pathol 2007 Mar;8(2):215-21

Plant Pathology, Swammerdam Institute for Life Sciences, University of Amsterdam, PO Box 94062, 1090 GB Amsterdam, The Netherlands.

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http://dx.doi.org/10.1111/j.1364-3703.2007.00384.xDOI Listing
March 2007

1,2,3-Triazoles as peptide bond isosteres: synthesis and biological evaluation of cyclotetrapeptide mimics.

Org Biomol Chem 2007 Mar 6;5(6):971-5. Epub 2007 Feb 6.

Van't Hoff Institute for Molecular Sciences, University of Amsterdam, Nieuwe Achtergracht 129, 1018 WS, Amsterdam, The Netherlands.

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http://dx.doi.org/10.1039/b616751aDOI Listing
March 2007

Is kinetoplastid pan-editing the result of an evolutionary balancing act?

Authors:
Dave Speijer

IUBMB Life 2006 Feb;58(2):91-6

Department of Medical Biochemistry, AMC, Amsterdam, The Netherlands.

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http://dx.doi.org/10.1080/15216540600551355DOI Listing
February 2006

Proteomic analysis of mouse kidney peroxisomes: identification of RP2p as a peroxisomal nudix hydrolase with acyl-CoA diphosphatase activity.

Biochem J 2006 Jan;393(Pt 2):537-43

Department of Clinical Chemistry, Emma Children's Hospital, Academic Medical Center, University of Amsterdam, P.O. Box 22700, 1100 DE, Amsterdam, The Netherlands.

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http://dx.doi.org/10.1042/BJ20050893DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1360704PMC
January 2006

Proteomic analysis of high-density lipoprotein.

Proteomics 2006 Jan;6(2):721-30

Department of Vascular Medicine, Academic Medical Center, University of Amsterdam, The Netherlands.

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http://dx.doi.org/10.1002/pmic.200500191DOI Listing
January 2006

The N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase PrmC/HemK in Chlamydia trachomatis methylates class 1 release factors.

J Bacteriol 2005 Jan;187(2):507-11

Academic Medical Center, Dept. of Medical Microbiology, Room L1-162, University of Amsterdam, PO Box 22660, 1100 DD Amsterdam, The Netherlands.

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http://dx.doi.org/10.1128/JB.187.2.507-511.2005DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC543528PMC
January 2005

Role of the alpha-glucanase Agn1p in fission-yeast cell separation.

Mol Biol Cell 2004 Aug 11;15(8):3903-14. Epub 2004 Jun 11.

Department of Medical Biochemistry, Academic Medical Center, University of Amsterdam, 1105 AZ Amsterdam, The Netherlands.

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http://dx.doi.org/10.1091/mbc.e04-04-0319DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC491845PMC
August 2004

Comparative proteomics of human endothelial cell caveolae and rafts using two-dimensional gel electrophoresis and mass spectrometry.

Electrophoresis 2004 Jan;25(1):156-72

Department of Biochemistry, Academic Medical Center, University of Amsterdam, Amsterdam, The Netherlands.

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http://dx.doi.org/10.1002/elps.200305675DOI Listing
January 2004

The ocular humoral immune response in health and disease.

Prog Retin Eye Res 2003 May;22(3):391-415

Department of Medical Chemistry, Faculty of Medicine, Kyoto University, Kyoto, Japan.

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May 2003

Recombinant enzyme therapy for Fabry disease: absence of editing of human alpha-galactosidase A mRNA.

Am J Hum Genet 2003 Jan 6;72(1):23-31. Epub 2002 Dec 6.

Department of Biochemistry, University of Amsterdam, Amsterdam, The Netherlands.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC420010PMC
http://dx.doi.org/10.1086/345309DOI Listing
January 2003

Igm recognition of recombinant Toxoplasma gondii antigens by sera of acutely or latently infected humans.

Diagn Microbiol Infect Dis 2003 Jan;45(1):45-52

Department of Molecular Immunology, The Netherlands Ophthalmic Research Institute, Amsterdam, The Netherlands.

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http://dx.doi.org/10.1016/s0732-8893(02)00476-5DOI Listing
January 2003

Conserved regions of protein disulfide isomerase are targeted by natural IgA antibodies in humans.

Int Immunol 2002 Nov;14(11):1291-301

Department of Molecular Immunology, The Netherlands Ophthalmic Research Institute, Meibergdreef 47, 1105 BA Amsterdam, The Netherlands.

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http://dx.doi.org/10.1093/intimm/dxf091DOI Listing
November 2002

Mass spectrometric identification of isoforms of PR proteins in xylem sap of fungus-infected tomato.

Plant Physiol 2002 Oct;130(2):904-17

Plant Pathology, Swammerdam Institute for Life Sciences, University of Amsterdam, Nieuwe Achtergracht 166, 1018 WV Amsterdam, The Netherlands.

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http://dx.doi.org/10.1104/pp.007427DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC166617PMC
October 2002

Protein disulfide isomerase of Toxoplasma gondii is targeted by mucosal IgA antibodies in humans.

FEBS Lett 2002 Jul;522(1-3):104-8

Department of Molecular Immunology, the Netherlands Ophthalmic Research Institute, Meibergdreef 47, 1105 BA Amsterdam, The Netherlands.

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http://dx.doi.org/10.1016/s0014-5793(02)02911-3DOI Listing
July 2002