Publications by authors named "Darryl J Pappin"

33Publications

Tryp-N: A Thermostable Protease for the Production of N-terminal Argininyl and Lysinyl Peptides.

J Proteome Res 2020 04 20;19(4):1459-1469. Epub 2020 Mar 20.

Cold Spring Harbor Laboratory, 1 Bungtown Road, Cold Spring Harbor, New York 11724, United States.

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http://dx.doi.org/10.1021/acs.jproteome.9b00713DOI Listing
April 2020

HYPERsol: High-Quality Data from Archival FFPE Tissue for Clinical Proteomics.

J Proteome Res 2020 02 14;19(2):973-983. Epub 2020 Jan 14.

Department of Pathology and Laboratory Medicine , University of Pennsylvania , Philadelphia , Pennsylvania 19104 , United States.

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http://dx.doi.org/10.1021/acs.jproteome.9b00686DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7515636PMC
February 2020

Regulation of PTP1B activation through disruption of redox-complex formation.

Nat Chem Biol 2020 02 23;16(2):122-125. Epub 2019 Dec 23.

Department of Nanobioscience, College of Nanoscale Science and Engineering, SUNY Polytechnic Institute, Albany, NY, USA.

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http://dx.doi.org/10.1038/s41589-019-0433-0DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6982540PMC
February 2020

Muller's Ratchet and Ribosome Degeneration in the Obligate Intracellular Parasites .

Int J Mol Sci 2018 Dec 19;19(12). Epub 2018 Dec 19.

Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT 06511, USA.

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http://dx.doi.org/10.3390/ijms19124125DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6321566PMC
December 2018

DPM-1001 decreased copper levels and ameliorated deficits in a mouse model of Wilson's disease.

Genes Dev 2018 07 26;32(13-14):944-952. Epub 2018 Jun 26.

Cold Spring Harbor Laboratory, Cold Spring Harbor, New York 11724, USA.

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http://dx.doi.org/10.1101/gad.314658.118DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6075031PMC
July 2018

Error-prone protein synthesis in parasites with the smallest eukaryotic genome.

Proc Natl Acad Sci U S A 2018 07 18;115(27):E6245-E6253. Epub 2018 Jun 18.

Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT 06520;

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http://dx.doi.org/10.1073/pnas.1803208115DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6142209PMC
July 2018

Proteomic profile of cystic fibrosis sputum cells in adults chronically infected with .

Eur Respir J 2017 07 5;50(1). Epub 2017 Jul 5.

Centre for Experimental Medicine, Queen's University Belfast, Belfast, UK.

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http://dx.doi.org/10.1183/13993003.01569-2016DOI Listing
July 2017

Confirmation of translatability and functionality certifies the dual endothelin1/VEGFsp receptor (DEspR) protein.

BMC Mol Biol 2016 06 14;17(1):15. Epub 2016 Jun 14.

Whitaker Cardiovascular Institute, Boston University School of Medicine, 700 Albany Street, Boston, MA, 02118, USA.

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http://dx.doi.org/10.1186/s12867-016-0066-8DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4906906PMC
June 2016

Efficient Reassignment of a Frequent Serine Codon in Wild-Type Escherichia coli.

ACS Synth Biol 2016 Feb 20;5(2):163-71. Epub 2015 Nov 20.

Department of Genetics, Harvard Medical School , Boston, Massachusetts 02115, United States.

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http://dx.doi.org/10.1021/acssynbio.5b00197DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4807657PMC
February 2016

BET Bromodomain Inhibition Suppresses the Function of Hematopoietic Transcription Factors in Acute Myeloid Leukemia.

Mol Cell 2015 Jun 14;58(6):1028-39. Epub 2015 May 14.

Cold Spring Harbor Laboratory, 1 Bungtown Road, Cold Spring Harbor, NY 11724, USA. Electronic address:

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http://dx.doi.org/10.1016/j.molcel.2015.04.011DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4475489PMC
June 2015

p53 mutations change phosphatidylinositol acyl chain composition.

Cell Rep 2015 Jan 24;10(1):8-19. Epub 2014 Dec 24.

Cold Spring Harbor Laboratory, One Bungtown Road, Cold Spring Harbor, NY 11724, USA. Electronic address:

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http://dx.doi.org/10.1016/j.celrep.2014.12.010DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4287966PMC
January 2015

H2S-Induced sulfhydration of the phosphatase PTP1B and its role in the endoplasmic reticulum stress response.

Sci Signal 2011 Dec 13;4(203):ra86. Epub 2011 Dec 13.

Cold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA.

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http://dx.doi.org/10.1126/scisignal.2002329DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3328411PMC
December 2011

Probing the initiation and effector phases of the somatic piRNA pathway in Drosophila.

Genes Dev 2010 Nov 21;24(22):2499-504. Epub 2010 Oct 21.

Watson School of Biological Sciences, Howard Hughes Medical Institute, Cold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA.

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http://genesdev.cshlp.org/cgi/doi/10.1101/gad.1968110
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http://dx.doi.org/10.1101/gad.1968110DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2975926PMC
November 2010

Computational protein profile similarity screening for quantitative mass spectrometry experiments.

Bioinformatics 2010 Jan 27;26(1):77-83. Epub 2009 Oct 27.

Department of Pathology, Proteomics Center, Children's Hospital Boston, Boston, MA, USA.

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http://dx.doi.org/10.1093/bioinformatics/btp607DOI Listing
January 2010

Straightforward and de novo peptide sequencing by MALDI-MS/MS using a Lys-N metalloendopeptidase.

Mol Cell Proteomics 2009 Apr 29;8(4):650-60. Epub 2008 Nov 29.

Biomolecular Mass Spectrometry and Proteomics Group, Utrecht Institute for Pharmaceutical Sciences and Bijvoet Center for Biomolecular Research, Utrecht University, The Netherlands.

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http://dx.doi.org/10.1074/mcp.M800249-MCP200DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2667348PMC
April 2009

Electron transfer dissociation of iTRAQ labeled peptide ions.

J Proteome Res 2008 Sep 23;7(9):3643-8. Epub 2008 Jul 23.

Department of Chemistry, Purdue University, West Lafayette, Indiana 47907-2084, USA.

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http://dx.doi.org/10.1021/pr8001113DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2668817PMC
September 2008

Time-resolved mass spectrometry of tyrosine phosphorylation sites in the epidermal growth factor receptor signaling network reveals dynamic modules.

Mol Cell Proteomics 2005 Sep 11;4(9):1240-50. Epub 2005 Jun 11.

Biological Engineering Division, Massachusetts Institute of Technnology, Cambridge, Massachusetts 02139, USA.

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http://dx.doi.org/10.1074/mcp.M500089-MCP200DOI Listing
September 2005

The Secreted Larval Acidic Proteins (SLAPs) of Onchocerca spp. are encoded by orthologues of the alt gene family of Brugia malayi and have host protective potential.

Mol Biochem Parasitol 2004 Apr;134(2):213-24

Division of Molecular Biology and Immunology, Liverpool School of Tropical Medicine, Liverpool L3 5QA, UK.

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http://dx.doi.org/10.1016/j.molbiopara.2003.12.002DOI Listing
April 2004

The coiled-coil membrane protein golgin-84 is a novel rab effector required for Golgi ribbon formation.

J Cell Biol 2003 Jan 21;160(2):201-12. Epub 2003 Jan 21.

School of Biological Sciences, University of Manchester, Manchester M13 9PT, UK.

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http://dx.doi.org/10.1083/jcb.200207045DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2172652PMC
January 2003

Peptide mass fingerprinting using MALDI-TOF mass spectrometry.

Methods Mol Biol 2003 ;211:211-9

Imperial College, University of London, London, UK.

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http://dx.doi.org/10.1385/1-59259-342-9:211DOI Listing
May 2003