Publications by authors named "Darren A Cusanovich"

19Publications

Cicero Predicts cis-Regulatory DNA Interactions from Single-Cell Chromatin Accessibility Data.

Mol Cell 2018 09 2;71(5):858-871.e8. Epub 2018 Aug 2.

Department of Genome Sciences, University of Washington, Seattle, WA, USA; Brotman Baty Institute for Precision Medicine, Seattle, WA, USA. Electronic address:

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September 2018

A Single-Cell Atlas of In Vivo Mammalian Chromatin Accessibility.

Cell 2018 08 2;174(5):1309-1324.e18. Epub 2018 Aug 2.

Department of Genome Sciences, University of Washington, Seattle, WA 98195, USA; Brotman Baty Institute for Precision Medicine, Seattle, WA 98195, USA; Howard Hughes Medical Institute, Seattle, WA 98195, USA. Electronic address:

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August 2018

CRISPR/Cas9-Mediated Scanning for Regulatory Elements Required for HPRT1 Expression via Thousands of Large, Programmed Genomic Deletions.

Am J Hum Genet 2017 Aug 14;101(2):192-205. Epub 2017 Jul 14.

Department of Genome Sciences, University of Washington, Seattle, WA 98195, USA; Howard Hughes Medical Institute, Seattle, WA 98195, USA. Electronic address:

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August 2017

Mapping 3D genome architecture through in situ DNase Hi-C.

Nat Protoc 2016 11 29;11(11):2104-21. Epub 2016 Sep 29.

Institute for Stem Cell and Regenerative Medicine, University of Washington, Seattle, Washington, USA.

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November 2016

Genome-Wide Association Studies of the Human Gut Microbiota.

PLoS One 2015 3;10(11):e0140301. Epub 2015 Nov 3.

Department of Human Genetics, University of Chicago, Chicago, IL, United States of America.

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June 2016

The functional consequences of variation in transcription factor binding.

PLoS Genet 2014 Mar 6;10(3):e1004226. Epub 2014 Mar 6.

Department of Human Genetics, University of Chicago, Chicago, Illinois, United States of America.

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March 2014

Primate transcript and protein expression levels evolve under compensatory selection pressures.

Science 2013 Nov 17;342(6162):1100-4. Epub 2013 Oct 17.

Department of Human Genetics, University of Chicago, Chicago, IL 60637, USA.

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November 2013

The effects of EBV transformation on gene expression levels and methylation profiles.

Hum Mol Genet 2011 Apr 2;20(8):1643-52. Epub 2011 Feb 2.

Department of Human Genetics, University of Chicago, 920 East 58th Street, Chicago, IL 60637, USA.

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April 2011