Darrell R Davis

Darrell R Davis

UNVERIFIED PROFILE

Are you Darrell R Davis?   Register this Author

Register author
Darrell R Davis

Darrell R Davis

Publications by authors named "Darrell R Davis"

Are you Darrell R Davis?   Register this Author

18Publications

122Reads

9Profile Views

Probing the influence of hypermodified residues within the tRNA3(Lys) anticodon stem loop interacting with the A-loop primer sequence from HIV-1.

Biochim Biophys Acta 2016 Mar 2;1860(3):607-17. Epub 2015 Dec 2.

Department of Medicinal Chemistry, University of Utah, Salt Lake City, UT 84112, United States. Electronic address:

View Article

Download full-text PDF

Source
https://linkinghub.elsevier.com/retrieve/pii/S03044165150032
Publisher Site
http://dx.doi.org/10.1016/j.bbagen.2015.11.009DOI Listing
March 2016

Structural and energetic analysis of 2-aminobenzimidazole inhibitors in complex with the hepatitis C virus IRES RNA using molecular dynamics simulations.

J Chem Inf Model 2014 Jun 3;54(6):1758-72. Epub 2014 Jun 3.

Department of Medicinal Chemistry, College of Pharmacy, University of Utah , Salt Lake City, Utah 84112, United States.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1021/ci500132cDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4076022PMC
June 2014

Molecular dynamics re-refinement of two different small RNA loop structures using the original NMR data suggest a common structure.

J Biomol NMR 2012 Aug 20;53(4):321-39. Epub 2012 Jun 20.

Department of Medicinal Chemistry, College of Pharmacy, University of Utah, 2000 East 30 South Skaggs 201, Salt Lake City, UT 84112, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1007/s10858-012-9642-5DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3405240PMC
August 2012

Therapeutic targeting of HCV internal ribosomal entry site RNA.

Antivir Chem Chemother 2011 ;21(3):117-28

Department of Medicinal Chemistry, University of Utah, Salt Lake City, UT, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.3851/IMP1693DOI Listing
May 2011

Measuring antiviral activity of benzimidazole molecules that alter IRES RNA structure with an infectious hepatitis C virus chimera expressing Renilla luciferase.

Antiviral Res 2011 Jan 12;89(1):54-63. Epub 2010 Nov 12.

Department of Medicine, University of Utah School of Medicine, 30 N 1900 E, Salt Lake City, UT 84132, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.antiviral.2010.11.004DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3018537PMC
January 2011

Inhibitor-induced structural change in the HCV IRES domain IIa RNA.

Proc Natl Acad Sci U S A 2010 Apr 1;107(16):7263-8. Epub 2010 Apr 1.

Department of Medicinal Chemistry, University of Utah, Salt Lake City, UT 84112, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1073/pnas.0911896107DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2867761PMC
April 2010

Parallel dimerization of a PrrC-anticodon nuclease region implicated in tRNALys recognition.

Nucleic Acids Res 2007 29;35(14):4704-14. Epub 2007 Jun 29.

Department of Biochemistry, Tel Aviv University, Tel Aviv 69978, Israel.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/nar/gkm494DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1950546PMC
September 2007

A novel method for sequence placement of modified nucleotides in mixtures of transfer RNA.

Nucleic Acids Symp Ser (Oxf) 2004 (48):263-4

Department of Medicinal Chemistry, University of Utah, Salt Lake City, Utah 84112, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/nass/48.1.263DOI Listing
July 2007

Introduction of hypermodified nucleotides in RNA.

Methods Mol Biol 2005 ;288:187-204

Department of Medicinal Chemistry, University of Utah, Salt Lake City, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1385/1-59259-823-4:187DOI Listing
November 2004

Ubiquitin interactions of NZF zinc fingers.

EMBO J 2004 Apr 18;23(7):1411-21. Epub 2004 Mar 18.

Department of Biochemistry, University of Utah, Salt Lake City, UT, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1038/sj.emboj.7600114DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC391057PMC
April 2004

Structure and ubiquitin interactions of the conserved zinc finger domain of Npl4.

J Biol Chem 2003 May 18;278(22):20225-34. Epub 2003 Mar 18.

Department of Biochemistry, University of Utah, Salt Lake City 84132, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1074/jbc.M300459200DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3366119PMC
May 2003

An RNA complex of the HIV-1 A-loop and tRNA(Lys,3) is stabilized by nucleoside modifications.

J Am Chem Soc 2002 Dec;124(48):14302-3

Department of Medicinal Chemistry, 30 South 2000 East Room 307, University of Utah, Salt Lake City, Utah 84112, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1021/ja028015fDOI Listing
December 2002

Structure of the Tsg101 UEV domain in complex with the PTAP motif of the HIV-1 p6 protein.

Nat Struct Biol 2002 Nov;9(11):812-7

Department of Biochemistry, University of Utah, Salt Lake City, Utah 84132, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1038/nsb856DOI Listing
November 2002

Synthesis of the tRNA(Lys,3) anticodon stem-loop domain containing the hypermodified ms2t6A nucleoside.

J Org Chem 2002 Jul;67(15):5352-8

Department of Medicinal Chemistry, University of Utah, Salt Lake City, Utah 84112, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1021/jo025826tDOI Listing
July 2002

Structure and functional interactions of the Tsg101 UEV domain.

EMBO J 2002 May;21(10):2397-406

Department of Biochemistry and Center for Biomolecular Interactions Analysis, University of Utah, Salt Lake City 84132, USA.

View Article

Download full-text PDF

Source
http://emboj.embopress.org/cgi/doi/10.1093/emboj/21.10.2397
Publisher Site
http://dx.doi.org/10.1093/emboj/21.10.2397DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC125378PMC
May 2002