Publications by authors named "Daniela Brites"

27Publications

An African origin for .

Evol Med Public Health 2020 31;2020(1):49-59. Epub 2020 Jan 31.

Molecular Parasitology and Infection Biology, Swiss Tropical and Public Health Institute, Basel, Switzerland.

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http://dx.doi.org/10.1093/emph/eoaa005DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7081938PMC
January 2020

The molecular clock of Mycobacterium tuberculosis.

PLoS Pathog 2019 09 12;15(9):e1008067. Epub 2019 Sep 12.

Department of Medical Parasitology and Infection Biology, Swiss Tropical and Public Health Institute, Basel, Switzerland.

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http://dx.doi.org/10.1371/journal.ppat.1008067DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6759198PMC
September 2019

Tuberculosis outbreak investigation using phylodynamic analysis.

Epidemics 2018 12 22;25:47-53. Epub 2018 May 22.

Department of Biosystems Science and Engineering, ETH Zürich, Basel, Switzerland; Swiss Institute of Bioinformatics (SIB), Lausanne, Switzerland.

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https://linkinghub.elsevier.com/retrieve/pii/S17554365173010
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http://dx.doi.org/10.1016/j.epidem.2018.05.004DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6227250PMC
December 2018

The Nature and Evolution of Genomic Diversity in the Mycobacterium tuberculosis Complex.

Adv Exp Med Biol 2017 ;1019:1-26

Swiss Tropical and Public Health Institute, University of Basel, Basel, Switzerland.

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http://dx.doi.org/10.1007/978-3-319-64371-7_1DOI Listing
March 2018

in Pancrustacean Immunity: Current Status and a Look to the Future.

Front Immunol 2017 9;8:662. Epub 2017 Jun 9.

Department of Biotechnology and Bioindustry Sciences, College of Bioscience and Biotechnology, National Cheng Kung University, Tainan, Taiwan.

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http://dx.doi.org/10.3389/fimmu.2017.00662DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5465998PMC
June 2017

The within-host population dynamics of Mycobacterium tuberculosis vary with treatment efficacy.

Genome Biol 2017 04 19;18(1):71. Epub 2017 Apr 19.

Key Laboratory of Medical Molecular Virology of Ministries of Education and Health, Institutes of Biomedical Sciences and Institute of Medical Microbiology, School of Basic Medical Sciences, Fudan University, Shanghai, 200032, China.

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http://dx.doi.org/10.1186/s13059-017-1196-0DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5395877PMC
April 2017

The Influence of HIV on the Evolution of Mycobacterium tuberculosis.

Mol Biol Evol 2017 07;34(7):1654-1668

Wellcome Centre for Infectious Disease Research in Africa, Institute of Infectious Disease and Molecular Medicine, and Department of Medicine, University of Cape Town, Cape Town, South Africa.

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https://academic.oup.com/mbe/article-lookup/doi/10.1093/molb
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http://dx.doi.org/10.1093/molbev/msx107DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5455964PMC
July 2017

Mycobacterium tuberculosis lineage 4 comprises globally distributed and geographically restricted sublineages.

Nat Genet 2016 12 31;48(12):1535-1543. Epub 2016 Oct 31.

Swiss Tropical and Public Health Institute, Basel, Switzerland.

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http://jcm.asm.org/content/47/4/1119.full.pdf
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http://jcm.asm.org/content/early/2009/02/11/JCM.02142-08.ful
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http://dx.doi.org/10.1038/ng.3704DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5238942PMC
December 2016

Somatic and Germline Diversification of a Putative Immunoreceptor within One Phylum: Dscam in Arthropods.

Results Probl Cell Differ 2015 ;57:131-58

Institute of Zoology and Evolutionary Biology, University of Basel, Vesalgasse 1, 4051, Basel, Switzerland.

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http://dx.doi.org/10.1007/978-3-319-20819-0_6DOI Listing
April 2016

Co-evolution of Mycobacterium tuberculosis and Homo sapiens.

Immunol Rev 2015 Mar;264(1):6-24

Department of Medical Parasitology and Infection Biology, Swiss Tropical and Public Health Institute and University of Basel, Basel, Switzerland.

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http://dx.doi.org/10.1111/imr.12264DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4339235PMC
March 2015

The first myriapod genome sequence reveals conservative arthropod gene content and genome organisation in the centipede Strigamia maritima.

Authors:
Ariel D Chipman David E K Ferrier Carlo Brena Jiaxin Qu Daniel S T Hughes Reinhard Schröder Montserrat Torres-Oliva Nadia Znassi Huaiyang Jiang Francisca C Almeida Claudio R Alonso Zivkos Apostolou Peshtewani Aqrawi Wallace Arthur Jennifer C J Barna Kerstin P Blankenburg Daniela Brites Salvador Capella-Gutiérrez Marcus Coyle Peter K Dearden Louis Du Pasquier Elizabeth J Duncan Dieter Ebert Cornelius Eibner Galina Erikson Peter D Evans Cassandra G Extavour Liezl Francisco Toni Gabaldón William J Gillis Elizabeth A Goodwin-Horn Jack E Green Sam Griffiths-Jones Cornelis J P Grimmelikhuijzen Sai Gubbala Roderic Guigó Yi Han Frank Hauser Paul Havlak Luke Hayden Sophie Helbing Michael Holder Jerome H L Hui Julia P Hunn Vera S Hunnekuhl LaRonda Jackson Mehwish Javaid Shalini N Jhangiani Francis M Jiggins Tamsin E Jones Tobias S Kaiser Divya Kalra Nathan J Kenny Viktoriya Korchina Christie L Kovar F Bernhard Kraus François Lapraz Sandra L Lee Jie Lv Christigale Mandapat Gerard Manning Marco Mariotti Robert Mata Tittu Mathew Tobias Neumann Irene Newsham Dinh N Ngo Maria Ninova Geoffrey Okwuonu Fiona Ongeri William J Palmer Shobha Patil Pedro Patraquim Christopher Pham Ling-Ling Pu Nicholas H Putman Catherine Rabouille Olivia Mendivil Ramos Adelaide C Rhodes Helen E Robertson Hugh M Robertson Matthew Ronshaugen Julio Rozas Nehad Saada Alejandro Sánchez-Gracia Steven E Scherer Andrew M Schurko Kenneth W Siggens DeNard Simmons Anna Stief Eckart Stolle Maximilian J Telford Kristin Tessmar-Raible Rebecca Thornton Maurijn van der Zee Arndt von Haeseler James M Williams Judith H Willis Yuanqing Wu Xiaoyan Zou Daniel Lawson Donna M Muzny Kim C Worley Richard A Gibbs Michael Akam Stephen Richards

PLoS Biol 2014 Nov 25;12(11):e1002005. Epub 2014 Nov 25.

Human Genome Sequencing Center, Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, United States of America.

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http://dx.doi.org/10.1371/journal.pbio.1002005DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4244043PMC
November 2014

More than one way to produce protein diversity: duplication and limited alternative splicing of an adhesion molecule gene in basal arthropods.

Evolution 2013 Oct 4;67(10):2999-3011. Epub 2013 Jul 4.

Zoological Institute, University of Basel, Vesalgasse 1, 4051 Basel, Switzerland; Swiss Tropical and Public Health Institute, Socinstrasse 57, PO Box 4002, Basel.

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http://evolution.unibas.ch/ebert/publications/papers/01_pape
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http://doi.wiley.com/10.1111/evo.12179
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http://dx.doi.org/10.1111/evo.12179DOI Listing
October 2013

Old and new selective pressures on Mycobacterium tuberculosis.

Infect Genet Evol 2012 Jun 17;12(4):678-85. Epub 2011 Aug 17.

Swiss Tropical and Public Health Institute, Basel, Switzerland.

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http://dx.doi.org/10.1016/j.meegid.2011.08.010DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3253320PMC
June 2012

The Dscam homologue of the crustacean Daphnia is diversified by alternative splicing like in insects.

Mol Biol Evol 2008 Jul 9;25(7):1429-39. Epub 2008 Apr 9.

Zoologisches Institut, Evolutionsbiologie, Universität Basel, Vesalgasse 1, Switzerland.

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http://dx.doi.org/10.1093/molbev/msn087DOI Listing
July 2008