Publications by authors named "Daniel Vodák"

20Publications

Sample-Index Misassignment Impacts Tumour Exome Sequencing.

Sci Rep 2018 03 28;8(1):5307. Epub 2018 Mar 28.

Norwegian Cancer Genomics Consortium, Institute for Cancer Research, The Norwegian Radium Hospital/Oslo University Hospital, Oslo, Norway.

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http://dx.doi.org/10.1038/s41598-018-23563-4DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5871786PMC
March 2018

Personal Cancer Genome Reporter: variant interpretation report for precision oncology.

Bioinformatics 2018 05;34(10):1778-1780

Norwegian Cancer Genomics Consortium, Department of Tumor Biology, Institute for Cancer Research, Oslo University Hospital, Norway.

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http://dx.doi.org/10.1093/bioinformatics/btx817DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5946881PMC
May 2018

Potentially pathogenic germline CHEK2 c.319+2T>A among multiple early-onset cancer families.

Fam Cancer 2018 01;17(1):141-153

Department of Tumor Biology, Institute for Cancer Research, Oslo University Hospital, Oslo, Norway.

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http://dx.doi.org/10.1007/s10689-017-0011-0DOI Listing
January 2018

Androgen Receptor Deregulation Drives Bromodomain-Mediated Chromatin Alterations in Prostate Cancer.

Cell Rep 2017 06;19(10):2045-2059

Centre for Molecular Medicine Norway, Nordic European Molecular Biology Laboratory Partnership, Forskningsparken, University of Oslo, 21 0349 Oslo, Norway; Department of Molecular Oncology, Institute for Cancer Research, Oslo University Hospital, 0424 Oslo, Norway; PCUK Movember Centre of Excellence, CCRCB, Queen's University, Belfast BT7 1NN, Northern Ireland, UK. Electronic address:

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http://dx.doi.org/10.1016/j.celrep.2017.05.049DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5675034PMC
June 2017

The rainfall plot: its motivation, characteristics and pitfalls.

BMC Bioinformatics 2017 May 18;18(1):264. Epub 2017 May 18.

Department of Informatics, University of Oslo, Oslo, Norway.

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http://dx.doi.org/10.1186/s12859-017-1679-8DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5437519PMC
May 2017

Use of liquid biopsies to monitor disease progression in a sarcoma patient: a case report.

BMC Cancer 2017 01 6;17(1):29. Epub 2017 Jan 6.

Department of Tumor Biology, Institute for Cancer Research, The Norwegian Radium Hospital, Oslo University Hospital, Oslo, Norway.

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http://dx.doi.org/10.1186/s12885-016-2992-8DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5219677PMC
January 2017

TP53 Mutation Spectrum in Smokers and Never Smoking Lung Cancer Patients.

Front Genet 2016 11;7:85. Epub 2016 May 11.

Department of Cancer Genetics, Institute for Cancer Research, Oslo University Hospital - The Norwegian Radium HospitalOslo, Norway; Department of Oncology, Oslo University Hospital - The Norwegian Radium HospitalOslo, Norway.

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http://dx.doi.org/10.3389/fgene.2016.00085DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4863128PMC
May 2016

Transcriptomic Profiling of Tumor Aggressiveness in Sporadic Nonfunctioning Pancreatic Neuroendocrine Neoplasms.

Pancreas 2016 09;45(8):1196-203

From the *Department of Hepato-Pancreato-Biliary Surgery, Oslo University Hospital; †Institute of Clinical Medicine, University of Oslo; ‡Department of Tumor Biology, Institute for Cancer Research, and §Section for Cancer Cytogenetics, Institute for Cancer Genetics and Informatics, Oslo University Hospital; and ∥Centre for Cancer Biomedicine and ¶Department of Informatics, University of Oslo, Oslo, Norway.

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http://dx.doi.org/10.1097/MPA.0000000000000610DOI Listing
September 2016

A comprehensive assessment of somatic mutation detection in cancer using whole-genome sequencing.

Nat Commun 2015 Dec 9;6:10001. Epub 2015 Dec 9.

CNAG-CRG, Centre for Genomic Regulation, Barcelona Institute of Science and Technology (BIST), Baldiri i Reixac 4, 08028 Barcelona, Spain.

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http://dx.doi.org/10.1038/ncomms10001DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4682041PMC
December 2015

Glucocorticoid receptor and Klf4 co-regulate anti-inflammatory genes in keratinocytes.

Mol Cell Endocrinol 2015 Sep 19;412:281-9. Epub 2015 May 19.

Instituto de Biomedicina de Valencia-Consejo Superior de Investigaciones Científicas (IBV-CSIC), Jaime Roig 11, E-46010 Valencia, Spain. Electronic address:

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http://dx.doi.org/10.1016/j.mce.2015.05.015DOI Listing
September 2015

Performance comparison of four exome capture systems for deep sequencing.

BMC Genomics 2014 Jun 9;15:449. Epub 2014 Jun 9.

Department of Tumor Biology, Oslo University Hospital, Norwegian Radium Hospital, 0310 Oslo, Norway.

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http://dx.doi.org/10.1186/1471-2164-15-449DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4092227PMC
June 2014