Daniel H Huson

Daniel H Huson

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Daniel H Huson

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Human Salivary Amylase Gene Copy Number Impacts Oral and Gut Microbiomes.

Cell Host Microbe 2019 Apr;25(4):553-564.e7

Department of Microbiome Science, Max Planck Institute for Developmental Biology, 72076 Tübingen, Germany; Department of Molecular Biology and Genetics, Cornell University, Ithaca, NY 14853, USA. Electronic address:

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https://linkinghub.elsevier.com/retrieve/pii/S19313128193011
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http://dx.doi.org/10.1016/j.chom.2019.03.001DOI Listing
April 2019

Annotated bacterial chromosomes from frame-shift-corrected long-read metagenomic data.

Microbiome 2019 04 16;7(1):61. Epub 2019 Apr 16.

Singapore Centre for Environmental Life Sciences Engineering, National University of Singapore, 28 Medical Drive, Singapore, 117456, Singapore.

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https://microbiomejournal.biomedcentral.com/articles/10.1186
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http://dx.doi.org/10.1186/s40168-019-0665-yDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6469205PMC
April 2019

Autumn Algorithm-Computation of Hybridization Networks for Realistic Phylogenetic Trees.

IEEE/ACM Trans Comput Biol Bioinform 2018 Mar-Apr;15(2):398-410. Epub 2016 Mar 2.

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http://dx.doi.org/10.1109/TCBB.2016.2537326DOI Listing
February 2019

MEGAN-LR: new algorithms allow accurate binning and easy interactive exploration of metagenomic long reads and contigs.

Biol Direct 2018 04 20;13(1). Epub 2018 Apr 20.

Singapore Centre for Environmental Life Sciences Engineering, National University of Singapore, 28 Medical Drive, Singapore, 117456, Singapore.

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http://dx.doi.org/10.1186/s13062-018-0208-7DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5910613PMC
April 2018

Genome Sequence of (Greater Wax Moth).

Genome Announc 2018 Jan 11;6(2). Epub 2018 Jan 11.

Department for Medical Microbiology and Hygiene, Interfaculty Institute for Microbiology and Infection Medicine, University of Tübingen, Tübingen, Germany

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http://dx.doi.org/10.1128/genomeA.01220-17DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5764926PMC
January 2018

Soil biochar amendment affects the diversity of nosZ transcripts: Implications for NO formation.

Sci Rep 2017 06 13;7(1):3338. Epub 2017 Jun 13.

Department of Civil, Environmental, and Geo-Engineering, University of Minnesota, Minneapolis, 55455, MN, USA.

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http://dx.doi.org/10.1038/s41598-017-03282-yDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5469825PMC
June 2017

A simple statistical test of taxonomic or functional homogeneity using replicated microbiome sequencing samples.

J Biotechnol 2017 May 27;250:45-50. Epub 2016 Oct 27.

Institute of Medical Microbiology and Hygiene, University of Tübingen, Germany; German Center for Infection Research (DZIF), Partner Site Tübingen, Germany.

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http://dx.doi.org/10.1016/j.jbiotec.2016.10.020DOI Listing
May 2017

SILVA, RDP, Greengenes, NCBI and OTT - how do these taxonomies compare?

BMC Genomics 2017 03 14;18(Suppl 2):114. Epub 2017 Mar 14.

University of Tübingen, Department of Computer Science, Sand 14, Tübingen, 72076, Germany.

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http://dx.doi.org/10.1186/s12864-017-3501-4DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5374703PMC
March 2017

Fast and simple protein-alignment-guided assembly of orthologous gene families from microbiome sequencing reads.

Microbiome 2017 01 25;5(1):11. Epub 2017 Jan 25.

Life Sciences Institute, National University of Singapore, 28 Medical Drive, Singapore, 117456, Singapore.

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http://dx.doi.org/10.1186/s40168-017-0233-2DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5267372PMC
January 2017

RiboTagger: fast and unbiased 16S/18S profiling using whole community shotgun metagenomic or metatranscriptome surveys.

BMC Bioinformatics 2016 Dec 22;17(Suppl 19):508. Epub 2016 Dec 22.

Singapore Centre for Environmental Life Sciences Engineering, National University of Singapore, Singapore, 117456, Singapore.

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http://dx.doi.org/10.1186/s12859-016-1378-xDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5259810PMC
December 2016

Soil biochar amendment shapes the composition of N2O-reducing microbial communities.

Sci Total Environ 2016 08 18;562:379-390. Epub 2016 Apr 18.

Geomicrobiology & Microbial Ecology, Center for Applied Geosciences, University of Tuebingen, Sigwartstr. 10, 72076 Tuebingen, Germany; Department of Civil, Environmental, and Geo-Engineering, University of Minnesota, 500 Pillsbury Drive S.E., Minneapolis, MN 55455-0116, USA; BioTechnology Institute, 140 Gortner Labs, 1479 Gortner Avenue, St. Paul, MN 55108-6106, USA. Electronic address:

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http://dx.doi.org/10.1016/j.scitotenv.2016.03.220DOI Listing
August 2016

A metagenomic-based survey of microbial (de)halogenation potential in a German forest soil.

Sci Rep 2016 06 29;6:28958. Epub 2016 Jun 29.

Department of Civil, Environmental, and Geo- Engineering, University of Minnesota, MN, USA.

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http://dx.doi.org/10.1038/srep28958DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4926216PMC
June 2016

Extensive Mobilome-Driven Genome Diversification in Mouse Gut-Associated Bacteroides vulgatus mpk.

Genome Biol Evol 2016 Apr 25;8(4):1197-207. Epub 2016 Apr 25.

Interfacultary Institute for Microbiology and Infection Medicine, Department for Medical Microbiology and Hygiene, University of Tübingen, Tübingen, Germany

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http://dx.doi.org/10.1093/gbe/evw070DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4860699PMC
April 2016

Antibiotic Selection Pressure Determination through Sequence-Based Metagenomics.

Antimicrob Agents Chemother 2015 Dec 14;59(12):7335-45. Epub 2015 Sep 14.

Institute of Medical Microbiology and Hygiene, University of Tübingen, Tübingen, Germany German Center for Infection Research (DZIF), Partner Site Tübingen, Tübingen, Germany.

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http://dx.doi.org/10.1128/AAC.01504-15DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4649198PMC
December 2015

Fast and sensitive protein alignment using DIAMOND.

Nat Methods 2015 Jan 17;12(1):59-60. Epub 2014 Nov 17.

1] Department of Computer Science and Center for Bioinformatics, University of Tübingen, Tübingen, Germany. [2] Singapore Centre on Environmental Life Sciences Engineering, School of Biological Sciences, Nanyang Technological University, Singapore.

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http://dx.doi.org/10.1038/nmeth.3176DOI Listing
January 2015

Microbial community analysis using MEGAN.

Methods Enzymol 2013 ;531:465-85

Center for Bioinformatics, University of Tübingen, Tübingen, Germany. Electronic address:

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http://dx.doi.org/10.1016/B978-0-12-407863-5.00021-6DOI Listing
April 2014

A poor man's BLASTX--high-throughput metagenomic protein database search using PAUDA.

Bioinformatics 2014 Jan 7;30(1):38-9. Epub 2013 May 7.

Singapore Centre on Environmental Life Sciences Engineering, School of Biological Sciences, Nanyang Technological University, Singapore 637551, Center for Bioinformatics, University of Tübingen, 72076 Tübingen, Germany and Life Sciences Institute, National University of Singapore, Singapore 117456.

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http://dx.doi.org/10.1093/bioinformatics/btt254DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3866550PMC
January 2014

Identifying a species tree subject to random lateral gene transfer.

J Theor Biol 2013 Apr 20;322:81-93. Epub 2013 Jan 20.

Allan Wilson Centre for Molecular Ecology and Evolution, University of Canterbury, Christchurch, New Zealand.

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http://dx.doi.org/10.1016/j.jtbi.2013.01.009DOI Listing
April 2013

Dendroscope 3: an interactive tool for rooted phylogenetic trees and networks.

Syst Biol 2012 Dec 10;61(6):1061-7. Epub 2012 Jul 10.

Department of Computer Science, Center for Bioinformatics (ZBIT), University of Tübingen, 72076 Tübingen, Germany.

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http://dx.doi.org/10.1093/sysbio/sys062DOI Listing
December 2012

Introduction to the analysis of environmental sequences: metagenomics with MEGAN.

Methods Mol Biol 2012 ;856:415-29

Center for Bioinformatics, Tübingen University, Tübingen, Germany.

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http://link.springer.com/10.1007/978-1-61779-585-5_17
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http://dx.doi.org/10.1007/978-1-61779-585-5_17DOI Listing
July 2012

Fast computation of minimum hybridization networks.

Bioinformatics 2012 Jan 9;28(2):191-7. Epub 2011 Nov 9.

Department of Computer Science, Center for Bioinformatics (ZBIT), Tübingen University, Sand 14, 72076 Tübingen, Germany.

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http://dx.doi.org/10.1093/bioinformatics/btr618DOI Listing
January 2012

Analysis of 16S rRNA environmental sequences using MEGAN.

BMC Genomics 2011 Nov 30;12 Suppl 3:S17. Epub 2011 Nov 30.

Center for Bioinformatics ZBIT, Tübingen University, Sand 14, 72076 Tübingen, Germany.

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http://dx.doi.org/10.1186/1471-2164-12-S3-S17DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3333176PMC
November 2011

Integrative analysis of environmental sequences using MEGAN4.

Genome Res 2011 Sep 20;21(9):1552-60. Epub 2011 Jun 20.

Center for Bioinformatics, Tübingen University, Tübingen, Germany.

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http://dx.doi.org/10.1101/gr.120618.111DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3166839PMC
September 2011

Tanglegrams for rooted phylogenetic trees and networks.

Bioinformatics 2011 Jul;27(13):i248-56

Center for Bioinformatics (ZBIT), Tübingen University, Sand 14, 72076 Tübingen, Germany.

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https://academic.oup.com/bioinformatics/article-lookup/doi/1
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http://dx.doi.org/10.1093/bioinformatics/btr210DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3117342PMC
July 2011

Reference-guided assembly of four diverse Arabidopsis thaliana genomes.

Proc Natl Acad Sci U S A 2011 Jun 6;108(25):10249-54. Epub 2011 Jun 6.

Department of Molecular Biology, Max Planck Institute for Developmental Biology, D-72076 Tübingen, Germany.

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http://dx.doi.org/10.1073/pnas.1107739108DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3121819PMC
June 2011

A survey of combinatorial methods for phylogenetic networks.

Genome Biol Evol 2011 15;3:23-35. Epub 2010 Nov 15.

Department of Computer Science, Center for Bioinformatics, Tübingen University, Tübingen, Germany.

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http://dx.doi.org/10.1093/gbe/evq077DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3017387PMC
April 2011

Functional analysis of metagenomes and metatranscriptomes using SEED and KEGG.

BMC Bioinformatics 2011 Feb 15;12 Suppl 1:S21. Epub 2011 Feb 15.

Center for Bioinformatics ZBIT, Tübingen University, Sand 14, 72076 Tübingen, Germany.

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http://dx.doi.org/10.1186/1471-2105-12-S1-S21DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3044276PMC
February 2011

Comparison of multiple metagenomes using phylogenetic networks based on ecological indices.

ISME J 2010 Oct 29;4(10):1236-42. Epub 2010 Apr 29.

Center for Bioinformatics ZBIT, Tübingen University, Tübingen, Germany.

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http://dx.doi.org/10.1038/ismej.2010.51DOI Listing
October 2010

Short clones or long clones? A simulation study on the use of paired reads in metagenomics.

BMC Bioinformatics 2010 Jan 18;11 Suppl 1:S12. Epub 2010 Jan 18.

Center for Bioinformatics ZBIT, Tübingen University, Sand 14, 72076 Tübingen, Germany.

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http://bmcbioinformatics.biomedcentral.com/articles/10.1186/
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http://dx.doi.org/10.1186/1471-2105-11-S1-S12DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3009484PMC
January 2010

Drawing rooted phylogenetic networks.

Authors:
Daniel H Huson

IEEE/ACM Trans Comput Biol Bioinform 2009 Jan-Mar;6(1):103-9

Tuebingen University, Tuebingen Sand 14, D-72076 Tuebingen, Germany.

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http://dx.doi.org/10.1109/TCBB.2008.58DOI Listing
August 2009

Special section: phylogenetics.

IEEE/ACM Trans Comput Biol Bioinform 2009 Jan-Mar;6(1):4-6

University of Tübingen, Sand 14, 72076 Tübingen, Germany.

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August 2009

Visual and statistical comparison of metagenomes.

Bioinformatics 2009 Aug 10;25(15):1849-55. Epub 2009 Jun 10.

Center for Bioinformatics ZBIT, Tübingen University, Sand 14, 72076 Tübingen, Germany.

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https://academic.oup.com/bioinformatics/article-lookup/doi/1
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http://dx.doi.org/10.1093/bioinformatics/btp341DOI Listing
August 2009

Computing galled networks from real data.

Bioinformatics 2009 Jun;25(12):i85-93

Center for Bioinformatics ZBIT, Tübingen University, Tübingen, Germany.

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http://dx.doi.org/10.1093/bioinformatics/btp217DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2687971PMC
June 2009

Methods for comparative metagenomics.

BMC Bioinformatics 2009 Jan 30;10 Suppl 1:S12. Epub 2009 Jan 30.

Center for Bioinformatics ZBIT, Tübingen University, Sand 14, 72076 Tübingen, Germany.

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http://www.biomedcentral.com/1471-2105/10/S1/S12
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http://dx.doi.org/10.1186/1471-2105-10-S1-S12DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2648729PMC
January 2009

Evolution of Arabidopsis thaliana microRNAs from random sequences.

RNA 2008 Dec 24;14(12):2455-9. Epub 2008 Oct 24.

Department of Molecular Biology, Max Planck Institute for Developmental Biology, 72076 Tübingen, Germany.

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http://dx.doi.org/10.1261/rna.1149408DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2590950PMC
December 2008

Filtered Z-closure supernetworks for extracting and visualizing recurrent signal from incongruent gene trees.

Syst Biol 2008 Dec;57(6):939-47

Department of Entomology, University of Illinois, Urbana, Illinois 61801, USA.

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http://dx.doi.org/10.1080/10635150802552849DOI Listing
December 2008

MetaSim: a sequencing simulator for genomics and metagenomics.

PLoS One 2008 Oct 8;3(10):e3373. Epub 2008 Oct 8.

ZBIT- Center for Bioinformatics Tübingen, University of Tübingen, Tübingen, Germany.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0003373PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2556396PMC
October 2008

Improved layout of phylogenetic networks.

IEEE/ACM Trans Comput Biol Bioinform 2008 Jul-Sep;5(3):472-9

Departement Informatique, Ecole Normale Superieure de Cachan, 61 Avenue du President Wilson, 94235 Cachan Cedex, France.

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http://dx.doi.org/10.1109/tcbb.2007.1046DOI Listing
September 2008

Drawing explicit phylogenetic networks and their integration into SplitsTree.

BMC Evol Biol 2008 Jan 24;8:22. Epub 2008 Jan 24.

Center for Bioinformatics ZBIT, Tübingen University, Sand 14, 72076 Tübingen, Germany.

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http://dx.doi.org/10.1186/1471-2148-8-22DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2253509PMC
January 2008

Dendroscope: An interactive viewer for large phylogenetic trees.

BMC Bioinformatics 2007 Nov 22;8:460. Epub 2007 Nov 22.

Center for Bioinformatics Tübingen (ZBIT), Eberhard-Karls-Universität Tübingen, Sand 14, 72076 Tübingen, Germany.

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http://dx.doi.org/10.1186/1471-2105-8-460DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2216043PMC
November 2007

OSLay: optimal syntenic layout of unfinished assemblies.

Bioinformatics 2007 Jul 26;23(13):1573-9. Epub 2007 Apr 26.

Center for Bioinformatics (ZBIT), Institute for Computer Science, Tübingen University, 72076 Tübingen, Germany.

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http://dx.doi.org/10.1093/bioinformatics/btm153DOI Listing
July 2007

Phylogenetic analysis of condensation domains in NRPS sheds light on their functional evolution.

BMC Evol Biol 2007 May 16;7:78. Epub 2007 May 16.

Center for Bioinformatics Tübingen (ZBIT), Eberhard-Karls-Universität Tübingen, Sand 14, Tübingen, Germany.

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http://dx.doi.org/10.1186/1471-2148-7-78DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1894796PMC
May 2007

COPYCAT: cophylogenetic analysis tool.

Bioinformatics 2007 Apr 31;23(7):898-900. Epub 2007 Jan 31.

Center for Bioinformatics (ZBIT), Sand 14, Tübingen, Germany.

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https://academic.oup.com/bioinformatics/article-lookup/doi/1
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http://dx.doi.org/10.1093/bioinformatics/btm027DOI Listing
April 2007

MEGAN analysis of metagenomic data.

Genome Res 2007 Mar 25;17(3):377-86. Epub 2007 Jan 25.

Center for Bioinformatics, Tübingen University, Sand 14, 72076 Tübingen, Germany.

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http://www.genome.org/cgi/doi/10.1101/gr.5969107
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http://dx.doi.org/10.1101/gr.5969107DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1800929PMC
March 2007

Constructing splits graphs.

IEEE/ACM Trans Comput Biol Bioinform 2004 Jul-Sep;1(3):109-15

Max-Planck-Institute for Mathematics in the Sciences, Leipzig, Germany.

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http://dx.doi.org/10.1109/TCBB.2004.27DOI Listing
November 2006

Phylogenetic super-networks from partial trees.

IEEE/ACM Trans Comput Biol Bioinform 2004 Oct-Dec;1(4):151-8

Center for Bioinformatics (ZBIT), Tübingen University, Sand 14, 72076 Tübingen, Germany.

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http://dx.doi.org/10.1109/TCBB.2004.44 DOI Listing
November 2006

CrossLink: visualization and exploration of sequence relationships between (micro) RNAs.

Nucleic Acids Res 2006 Jul;34(Web Server issue):W400-4

Department of Algorithms in Bioinformatics, Center for Bioinformatics Tübingen, Tübingen University, D-72076 Tübingen, Germany.

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http://dx.doi.org/10.1093/nar/gkl223DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1538911PMC
July 2006

Application of phylogenetic networks in evolutionary studies.

Mol Biol Evol 2006 Feb 12;23(2):254-67. Epub 2005 Oct 12.

Center for Bioinformatics (ZBIT), Tübingen University, Tübingen, Germany.

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http://dx.doi.org/10.1093/molbev/msj030DOI Listing
February 2006

Identification of plant microRNA homologs.

Bioinformatics 2006 Feb 29;22(3):359-60. Epub 2005 Nov 29.

Center for Bioinformatics Tübingen, Tübingen University, Germany.

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http://dx.doi.org/10.1093/bioinformatics/bti802DOI Listing
February 2006

Metagenomics to paleogenomics: large-scale sequencing of mammoth DNA.

Science 2006 Jan 20;311(5759):392-4. Epub 2005 Dec 20.

McMaster Ancient DNA Center, McMaster University, 1280 Main Street West, Hamilton ON, L8S 4L9 Canada.

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http://www.sciencemag.org/cgi/doi/10.1126/science.1123360
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http://dx.doi.org/10.1126/science.1123360DOI Listing
January 2006

Specificity prediction of adenylation domains in nonribosomal peptide synthetases (NRPS) using transductive support vector machines (TSVMs).

Nucleic Acids Res 2005 12;33(18):5799-808. Epub 2005 Oct 12.

Center for Bioinformatics Tübingen (ZBIT), University of Tübingen, Germany.

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http://dx.doi.org/10.1093/nar/gki885DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1253831PMC
October 2005

Computing recombination networks from binary sequences.

Bioinformatics 2005 Sep;21 Suppl 2:ii159-65

Center for Bioinformatics, Tübingen University Sand 14, Tübingen, Germany.

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http://dx.doi.org/10.1093/bioinformatics/bti1126DOI Listing
September 2005

Whole-genome prokaryotic phylogeny.

Bioinformatics 2005 May 27;21(10):2329-35. Epub 2004 May 27.

Center for Bioinformatics Tübingen (ZBIT), Sand 14, Tübingen 72076, Germany.

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http://dx.doi.org/10.1093/bioinformatics/bth324DOI Listing
May 2005

VisRD--visual recombination detection.

Bioinformatics 2004 Dec 9;20(18):3654-5. Epub 2004 Jul 9.

The Linnaeus Centre for Bioinformatics, BMC, Box 598, Uppsala 751 24, Sweden.

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http://dx.doi.org/10.1093/bioinformatics/bth400DOI Listing
December 2004

Comparative analysis of four Campylobacterales.

Nat Rev Microbiol 2004 Nov;2(11):872-85

Max-Planck-Institute for Developmental Biology, Genome Centre, Spemannstr. 35, 72076 Tübingen, Germany.

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http://www.nature.com/articles/nrmicro1024
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http://dx.doi.org/10.1038/nrmicro1024DOI Listing
November 2004

Phylogenetic trees based on gene content.

Bioinformatics 2004 Sep 25;20(13):2044-9. Epub 2004 Mar 25.

Center for Bioinformatics, Tübingen University, Sand 14, 72076 Tübingen, Germany.

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http://dx.doi.org/10.1093/bioinformatics/bth198DOI Listing
September 2004

Distances that perfectly mislead.

Syst Biol 2004 Apr;53(2):327-32

Center for Bioinformatics, Tübingen University, Tuebingen, Germany.

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http://dx.doi.org/10.1080/10635150490423809DOI Listing
April 2004

What if I don't have a tree? Split decomposition and related models.

Authors:
Daniel H Huson

Curr Protoc Bioinformatics 2003 May;Chapter 6:Unit 6.7

Center for Bioinformatics Tübingen, Tübingen University, Tübingen, Germany.

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http://dx.doi.org/10.1002/0471250953.bi0607s01DOI Listing
May 2003

A comparison of whole-genome shotgun-derived mouse chromosome 16 and the human genome.

Authors:
Richard J Mural Mark D Adams Eugene W Myers Hamilton O Smith George L Gabor Miklos Ron Wides Aaron Halpern Peter W Li Granger G Sutton Joe Nadeau Steven L Salzberg Robert A Holt Chinnappa D Kodira Fu Lu Lin Chen Zuoming Deng Carlos C Evangelista Weiniu Gan Thomas J Heiman Jiayin Li Zhenya Li Gennady V Merkulov Natalia V Milshina Ashwinikumar K Naik Rong Qi Bixiong Chris Shue Aihui Wang Jian Wang Xin Wang Xianghe Yan Jane Ye Shibu Yooseph Qi Zhao Liansheng Zheng Shiaoping C Zhu Kendra Biddick Randall Bolanos Arthur L Delcher Ian M Dew Daniel Fasulo Michael J Flanigan Daniel H Huson Saul A Kravitz Jason R Miller Clark M Mobarry Knut Reinert Karin A Remington Qing Zhang Xiangqun H Zheng Deborah R Nusskern Zhongwu Lai Yiding Lei Wenyan Zhong Alison Yao Ping Guan Rui-Ru Ji Zhiping Gu Zhen-Yuan Wang Fei Zhong Chunlin Xiao Chia-Chien Chiang Mark Yandell Jennifer R Wortman Peter G Amanatides Suzanne L Hladun Eric C Pratts Jeffery E Johnson Kristina L Dodson Kerry J Woodford Cheryl A Evans Barry Gropman Douglas B Rusch Eli Venter Mei Wang Thomas J Smith Jarrett T Houck Donald E Tompkins Charles Haynes Debbie Jacob Soo H Chin David R Allen Carl E Dahlke Robert Sanders Kelvin Li Xiangjun Liu Alexander A Levitsky William H Majoros Quan Chen Ashley C Xia John R Lopez Michael T Donnelly Matthew H Newman Anna Glodek Cheryl L Kraft Marc Nodell Feroze Ali Hui-Jin An Danita Baldwin-Pitts Karen Y Beeson Shuang Cai Mark Carnes Amy Carver Parris M Caulk Angela Center Yen-Hui Chen Ming-Lai Cheng My D Coyne Michelle Crowder Steven Danaher Lionel B Davenport Raymond Desilets Susanne M Dietz Lisa Doup Patrick Dullaghan Steven Ferriera Carl R Fosler Harold C Gire Andres Gluecksmann Jeannine D Gocayne Jonathan Gray Brit Hart Jason Haynes Jeffery Hoover Tim Howland Chinyere Ibegwam Mena Jalali David Johns Leslie Kline Daniel S Ma Steven MacCawley Anand Magoon Felecia Mann David May Tina C McIntosh Somil Mehta Linda Moy Mee C Moy Brian J Murphy Sean D Murphy Keith A Nelson Zubeda Nuri Kimberly A Parker Alexandre C Prudhomme Vinita N Puri Hina Qureshi John C Raley Matthew S Reardon Megan A Regier Yu-Hui C Rogers Deanna L Romblad Jakob Schutz John L Scott Richard Scott Cynthia D Sitter Michella Smallwood Arlan C Sprague Erin Stewart Renee V Strong Ellen Suh Karena Sylvester Reginald Thomas Ni Ni Tint Christopher Tsonis Gary Wang George Wang Monica S Williams Sherita M Williams Sandra M Windsor Keriellen Wolfe Mitchell M Wu Jayshree Zaveri Kabir Chaturvedi Andrei E Gabrielian Zhaoxi Ke Jingtao Sun Gangadharan Subramanian J Craig Venter Cynthia M Pfannkoch Mary Barnstead Lisa D Stephenson

Science 2002 May;296(5573):1661-71

Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA.

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http://dx.doi.org/10.1126/science.1069193DOI Listing
May 2002