Daniel G Bradley

Daniel G Bradley

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Daniel G Bradley

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Ancient pigs reveal a near-complete genomic turnover following their introduction to Europe.

Authors:
Laurent A F Frantz James Haile Audrey T Lin Amelie Scheu Christina Geörg Norbert Benecke Michelle Alexander Anna Linderholm Victoria E Mullin Kevin G Daly Vincent M Battista Max Price Kurt J Gron Panoraia Alexandri Rose-Marie Arbogast Benjamin Arbuckle Adrian Bӑlӑşescu Ross Barnett László Bartosiewicz Gennady Baryshnikov Clive Bonsall Dušan Borić Adina Boroneanţ Jelena Bulatović Canan Çakirlar José-Miguel Carretero John Chapman Mike Church Richard Crooijmans Bea De Cupere Cleia Detry Vesna Dimitrijevic Valentin Dumitraşcu Louis du Plessis Ceiridwen J Edwards Cevdet Merih Erek Aslı Erim-Özdoğan Anton Ervynck Domenico Fulgione Mihai Gligor Anders Götherström Lionel Gourichon Martien A M Groenen Daniel Helmer Hitomi Hongo Liora K Horwitz Evan K Irving-Pease Ophélie Lebrasseur Joséphine Lesur Caroline Malone Ninna Manaseryan Arkadiusz Marciniak Holley Martlew Marjan Mashkour Roger Matthews Giedre Motuzaite Matuzeviciute Sepideh Maziar Erik Meijaard Tom McGovern Hendrik-Jan Megens Rebecca Miller Azadeh Fatemeh Mohaseb Jörg Orschiedt David Orton Anastasia Papathanasiou Mike Parker Pearson Ron Pinhasi Darko Radmanović François-Xavier Ricaut Mike Richards Richard Sabin Lucia Sarti Wolfram Schier Shiva Sheikhi Elisabeth Stephan John R Stewart Simon Stoddart Antonio Tagliacozzo Nenad Tasić Katerina Trantalidou Anne Tresset Cristina Valdiosera Youri van den Hurk Sophie Van Poucke Jean-Denis Vigne Alexander Yanevich Andrea Zeeb-Lanz Alexandros Triantafyllidis M Thomas P Gilbert Jörg Schibler Peter Rowley-Conwy Melinda Zeder Joris Peters Thomas Cucchi Daniel G Bradley Keith Dobney Joachim Burger Allowen Evin Linus Girdland-Flink Greger Larson

Proc Natl Acad Sci U S A 2019 Aug 12;116(35):17231-17238. Epub 2019 Aug 12.

The Palaeogenomics & Bio-Archaeology Research Network, Research Laboratory for Archaeology and History of Art, University of Oxford, Oxford OX1 3TG, United Kingdom;

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http://dx.doi.org/10.1073/pnas.1901169116DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6717267PMC
August 2019

Insular Celtic population structure and genomic footprints of migration.

PLoS Genet 2018 01 25;14(1):e1007152. Epub 2018 Jan 25.

Complex Trait Genomics Laboratory, Smurfit Institute of Genetics, School of Genetics and Microbiology, Trinity College Dublin, College Green, Dublin, Republic of Ireland.

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http://dx.doi.org/10.1371/journal.pgen.1007152DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5784891PMC
January 2018

Genetic correlation between amyotrophic lateral sclerosis and schizophrenia.

Nat Commun 2017 03 21;8:14774. Epub 2017 Mar 21.

Department of Neurology and Neurosurgery, Brain Center Rudolf Magnus, University Medical Center Utrecht, Utrecht 3584 CX, The Netherlands.

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http://dx.doi.org/10.1038/ncomms14774DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5364411PMC
March 2017

The Neolithic Transition in the Baltic Was Not Driven by Admixture with Early European Farmers.

Curr Biol 2017 Feb 2;27(4):576-582. Epub 2017 Feb 2.

Smurfit Institute of Genetics, Trinity College Dublin, Dublin 2, Ireland. Electronic address:

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http://dx.doi.org/10.1016/j.cub.2016.12.060DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5321670PMC
February 2017

Comparing the performance of three ancient DNA extraction methods for high-throughput sequencing.

Mol Ecol Resour 2016 Mar 15;16(2):459-69. Epub 2015 Oct 15.

Centre for GeoGenetics, Natural History Museum of Denmark, Øster Voldgade 5-7, 1350K, Copenhagen, Denmark.

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http://dx.doi.org/10.1111/1755-0998.12470DOI Listing
March 2016

Neolithic and Bronze Age migration to Ireland and establishment of the insular Atlantic genome.

Proc Natl Acad Sci U S A 2016 Jan 28;113(2):368-73. Epub 2015 Dec 28.

Smurfit Institute of Genetics, Trinity College, Dublin 2, Ireland;

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http://dx.doi.org/10.1073/pnas.1518445113DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4720318PMC
January 2016

Genome-wide association study for calving performance using high-density genotypes in dairy and beef cattle.

Genet Sel Evol 2015 Jun 12;47:47. Epub 2015 Jun 12.

Animal & Grassland Research and Innovation Center, Teagasc, Moorepark, Fermoy, Co. Cork, Ireland.

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http://dx.doi.org/10.1186/s12711-015-0126-4DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4464877PMC
June 2015

Homozygosity mapping in an Irish ALS case-control cohort describes local demographic phenomena and points towards potential recessive risk loci.

Genomics 2015 Apr 23;105(4):237-41. Epub 2015 Jan 23.

Academic Unit of Neurology, Trinity Biomedical Sciences Institute, Trinity College Dublin, Pearse Street, Dublin 2, Ireland. Electronic address:

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http://dx.doi.org/10.1016/j.ygeno.2015.01.002DOI Listing
April 2015

Second-generation Irish genome-wide association study for amyotrophic lateral sclerosis.

Neurobiol Aging 2015 Feb 6;36(2):1221.e7-13. Epub 2014 Sep 6.

Academic Unit of Neurology, Trinity Biomedical Sciences Institute, Trinity College Dublin, Dublin, Republic of Ireland.

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http://dx.doi.org/10.1016/j.neurobiolaging.2014.08.030DOI Listing
February 2015

Genome flux and stasis in a five millennium transect of European prehistory.

Nat Commun 2014 Oct 21;5:5257. Epub 2014 Oct 21.

1] School of Archaeology, University College Dublin, Belfield, Dublin 4, Ireland [2] Conway Institute, University College Dublin, Belfield, Dublin 4, Ireland [3] Smurfit Institute of Genetics, Trinity College Dublin, Dublin, Ireland [4] Earth Institute, University College Dublin, Belfield, Dublin 4, Ireland.

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http://dx.doi.org/10.1038/ncomms6257DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4218962PMC
October 2014

Genetic evidence of African slavery at the beginning of the trans-Atlantic slave trade.

Sci Rep 2014 Aug 8;4:5994. Epub 2014 Aug 8.

Smurfit Institute of Genetics, Trinity College Dublin, Dublin, Ireland.

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http://dx.doi.org/10.1038/srep05994DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4125989PMC
August 2014

Morphological and genetic evidence for early Holocene cattle management in northeastern China.

Nat Commun 2013 ;4:2755

Key Laboratory of Plateau Lake Ecology and Global Change, College of Tourism and Geography, Yunnan Normal University, Kunming, Chenggong 650500, China.

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http://dx.doi.org/10.1038/ncomms3755DOI Listing
June 2014

Analysis of the hexanucleotide repeat expansion and founder haplotype at C9ORF72 in an Irish psychosis case-control sample.

Neurobiol Aging 2014 Jun 12;35(6):1510.e1-5. Epub 2013 Dec 12.

Neuropsychiatric Genetics Research Group, Department of Psychiatry and Institute of Molecular Medicine, Trinity College Dublin, Dublin, Ireland; Trinity College Institute of Neuroscience, Trinity College Dublin, Dublin, Ireland. Electronic address:

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http://dx.doi.org/10.1016/j.neurobiolaging.2013.12.003DOI Listing
June 2014

UBQLN2 mutations are not a frequent cause of amyotrophic lateral sclerosis in Ireland.

Neurobiol Aging 2014 Jan 21;35(1):267.e9-11. Epub 2013 Aug 21.

Population Genetics Laboratory, Smurfit Institute of Genetics, Trinity College Dublin, Dublin, Republic of Ireland. Electronic address:

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http://dx.doi.org/10.1016/j.neurobiolaging.2013.07.023DOI Listing
January 2014

How much is that in dog years? The advent of canine population genomics.

PLoS Genet 2014 Jan 16;10(1):e1004093. Epub 2014 Jan 16.

Smurfit Institute of Genetics, Trinity College Dublin, Dublin, Ireland.

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http://dx.doi.org/10.1371/journal.pgen.1004093DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3894154PMC
January 2014

Basal ganglia involvement in amyotrophic lateral sclerosis.

Neurology 2013 Dec 8;81(24):2107-15. Epub 2013 Nov 8.

From the Biomedical Sciences Institute (P.B., M.E., S.B., A.V., O.H.), and Smurfit Institute of Genetics (R.L.M., K.K., D.G.B.), Trinity College Dublin; and Department of Neuropsychology (N.P.), Beaumont Hospital, Dublin, Ireland.

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http://dx.doi.org/10.1212/01.wnl.0000437313.80913.2cDOI Listing
December 2013

A genome-wide association study for somatic cell score using the Illumina high-density bovine beadchip identifies several novel QTL potentially related to mastitis susceptibility.

Front Genet 2013 6;4:229. Epub 2013 Nov 6.

Animal and Bioscience Research Department, Teagasc, Animal and Grassland Research and Innovation Centre Grange, Dunsany, Co. Meath, Ireland ; School of Agriculture and Food Science, University College Dublin Dublin 4, Ireland.

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http://dx.doi.org/10.3389/fgene.2013.00229DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3818585PMC
November 2013

Profiling microRNA expression in bovine alveolar macrophages using RNA-seq.

Vet Immunol Immunopathol 2013 Oct 24;155(4):238-44. Epub 2013 Aug 24.

Animal & Bioscience Research Department, Animal & Grassland Research and Innovation Centre, Teagasc, Grange, Dunsany, Co. Meath, Ireland; Smurfit Institute of Genetics, Trinity College, Dublin 2, Ireland.

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http://dx.doi.org/10.1016/j.vetimm.2013.08.004DOI Listing
October 2013

Multiparametric MRI study of ALS stratified for the C9orf72 genotype.

Neurology 2013 Jul 14;81(4):361-9. Epub 2013 Jun 14.

Trinity College Institute of Neuroscience-TCIN, Beaumont Hospital, Dublin, Ireland.

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http://dx.doi.org/10.1212/WNL.0b013e31829c5eeeDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3772833PMC
July 2013

Using reference databases of genetic variation to evaluate the potential pathogenicity of candidate disease variants.

Hum Mutat 2013 Jun 26;34(6):836-41. Epub 2013 Mar 26.

Smurfit Institute of Genetics, Trinity College Dublin, Dublin, Ireland.

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http://dx.doi.org/10.1002/humu.22303DOI Listing
June 2013

Novel SNP Discovery in African Buffalo, Syncerus caffer, using high-throughput Sequencing.

PLoS One 2012 7;7(11):e48792. Epub 2012 Nov 7.

DST/NRF Centre of Excellence for Biomedical Tuberculosis Research/MRC Centre for Molecular and Cellular Biology, Division of Molecular Biology and Human Genetics, Faculty of Health Sciences, Stellenbosch University, Cape Town, South Africa.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0048792PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3492240PMC
May 2013

Temporal genetic variation of the red fox, , across western Europe and the British Isles.

Quat Sci Rev 2012 Dec;57(100):95-104

Smurfit Institute of Genetics, Trinity College, Dublin 2, Ireland ; Research Laboratory for Archaeology, University of Oxford, Dyson Perrins Building, South Parks Road, Oxford OX1 3QY, UK.

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http://dx.doi.org/10.1016/j.quascirev.2012.10.010DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3778924PMC
December 2012

Runs of homozygosity and population history in cattle.

BMC Genet 2012 Aug 14;13:70. Epub 2012 Aug 14.

Smurfit Institute of Genetics, University of Dublin, Trinity College, Dublin 2, Ireland.

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http://dx.doi.org/10.1186/1471-2156-13-70DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3502433PMC
August 2012

Genome-wide associations for milk production and somatic cell score in Holstein-Friesian cattle in Ireland.

BMC Genet 2012 Mar 26;13:21. Epub 2012 Mar 26.

Animal and Bioscience Research Department, Teagasc, Animal & Grassland Research and Innovation Centre, Grange, Dunsany, Co, Meath, Ireland.

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http://dx.doi.org/10.1186/1471-2156-13-21DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3361482PMC
March 2012

Cattle demographic history modelled from autosomal sequence variation.

Philos Trans R Soc Lond B Biol Sci 2010 Aug;365(1552):2531-9

Smurfit Institute of Genetics, Trinity College, Dublin 2, Ireland.

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http://dx.doi.org/10.1098/rstb.2010.0103DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2935105PMC
August 2010

The differential evolutionary dynamics of avian cytokine and TLR gene classes.

J Immunol 2010 Jun 14;184(12):6993-7000. Epub 2010 May 14.

Smurfit Institute of Genetics, Dublin, Ireland.

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http://dx.doi.org/10.4049/jimmunol.0903092DOI Listing
June 2010

Evidence of the adaptive evolution of immune genes in chicken.

BMC Res Notes 2009 Dec 15;2:254. Epub 2009 Dec 15.

Smurfit Institute of Genetics, Trinity College, University of Dublin, Ireland.

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http://dx.doi.org/10.1186/1756-0500-2-254DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2804575PMC
December 2009

The genome sequence of taurine cattle: a window to ruminant biology and evolution.

Authors:
Christine G Elsik Ross L Tellam Kim C Worley Richard A Gibbs Donna M Muzny George M Weinstock David L Adelson Evan E Eichler Laura Elnitski Roderic Guigó Debora L Hamernik Steve M Kappes Harris A Lewin David J Lynn Frank W Nicholas Alexandre Reymond Monique Rijnkels Loren C Skow Evgeny M Zdobnov Lawrence Schook James Womack Tyler Alioto Stylianos E Antonarakis Alex Astashyn Charles E Chapple Hsiu-Chuan Chen Jacqueline Chrast Francisco Câmara Olga Ermolaeva Charlotte N Henrichsen Wratko Hlavina Yuri Kapustin Boris Kiryutin Paul Kitts Felix Kokocinski Melissa Landrum Donna Maglott Kim Pruitt Victor Sapojnikov Stephen M Searle Victor Solovyev Alexandre Souvorov Catherine Ucla Carine Wyss Juan M Anzola Daniel Gerlach Eran Elhaik Dan Graur Justin T Reese Robert C Edgar John C McEwan Gemma M Payne Joy M Raison Thomas Junier Evgenia V Kriventseva Eduardo Eyras Mireya Plass Ravikiran Donthu Denis M Larkin James Reecy Mary Q Yang Lin Chen Ze Cheng Carol G Chitko-McKown George E Liu Lakshmi K Matukumalli Jiuzhou Song Bin Zhu Daniel G Bradley Fiona S L Brinkman Lilian P L Lau Matthew D Whiteside Angela Walker Thomas T Wheeler Theresa Casey J Bruce German Danielle G Lemay Nauman J Maqbool Adrian J Molenaar Seongwon Seo Paul Stothard Cynthia L Baldwin Rebecca Baxter Candice L Brinkmeyer-Langford Wendy C Brown Christopher P Childers Timothy Connelley Shirley A Ellis Krista Fritz Elizabeth J Glass Carolyn T A Herzig Antti Iivanainen Kevin K Lahmers Anna K Bennett C Michael Dickens James G R Gilbert Darren E Hagen Hanni Salih Jan Aerts Alexandre R Caetano Brian Dalrymple Jose Fernando Garcia Clare A Gill Stefan G Hiendleder Erdogan Memili Diane Spurlock John L Williams Lee Alexander Michael J Brownstein Leluo Guan Robert A Holt Steven J M Jones Marco A Marra Richard Moore Stephen S Moore Andy Roberts Masaaki Taniguchi Richard C Waterman Joseph Chacko Mimi M Chandrabose Andy Cree Marvin Diep Dao Huyen H Dinh Ramatu Ayiesha Gabisi Sandra Hines Jennifer Hume Shalini N Jhangiani Vandita Joshi Christie L Kovar Lora R Lewis Yih-Shin Liu John Lopez Margaret B Morgan Ngoc Bich Nguyen Geoffrey O Okwuonu San Juana Ruiz Jireh Santibanez Rita A Wright Christian Buhay Yan Ding Shannon Dugan-Rocha Judith Herdandez Michael Holder Aniko Sabo Amy Egan Jason Goodell Katarzyna Wilczek-Boney Gerald R Fowler Matthew Edward Hitchens Ryan J Lozado Charles Moen David Steffen James T Warren Jingkun Zhang Readman Chiu Jacqueline E Schein K James Durbin Paul Havlak Huaiyang Jiang Yue Liu Xiang Qin Yanru Ren Yufeng Shen Henry Song Stephanie Nicole Bell Clay Davis Angela Jolivet Johnson Sandra Lee Lynne V Nazareth Bella Mayurkumar Patel Ling-Ling Pu Selina Vattathil Rex Lee Williams Stacey Curry Cerissa Hamilton Erica Sodergren David A Wheeler Wes Barris Gary L Bennett André Eggen Ronnie D Green Gregory P Harhay Matthew Hobbs Oliver Jann John W Keele Matthew P Kent Sigbjørn Lien Stephanie D McKay Sean McWilliam Abhirami Ratnakumar Robert D Schnabel Timothy Smith Warren M Snelling Tad S Sonstegard Roger T Stone Yoshikazu Sugimoto Akiko Takasuga Jeremy F Taylor Curtis P Van Tassell Michael D Macneil Antonio R R Abatepaulo Colette A Abbey Virpi Ahola Iassudara G Almeida Ariel F Amadio Elen Anatriello Suria M Bahadue Fernando H Biase Clayton R Boldt Jeffery A Carroll Wanessa A Carvalho Eliane P Cervelatti Elsa Chacko Jennifer E Chapin Ye Cheng Jungwoo Choi Adam J Colley Tatiana A de Campos Marcos De Donato Isabel K F de Miranda Santos Carlo J F de Oliveira Heather Deobald Eve Devinoy Kaitlin E Donohue Peter Dovc Annett Eberlein Carolyn J Fitzsimmons Alessandra M Franzin Gustavo R Garcia Sem Genini Cody J Gladney Jason R Grant Marion L Greaser Jonathan A Green Darryl L Hadsell Hatam A Hakimov Rob Halgren Jennifer L Harrow Elizabeth A Hart Nicola Hastings Marta Hernandez Zhi-Liang Hu Aaron Ingham Terhi Iso-Touru Catherine Jamis Kirsty Jensen Dimos Kapetis Tovah Kerr Sari S Khalil Hasan Khatib Davood Kolbehdari Charu G Kumar Dinesh Kumar Richard Leach Justin C-M Lee Changxi Li Krystin M Logan Roberto Malinverni Elisa Marques William F Martin Natalia F Martins Sandra R Maruyama Raffaele Mazza Kim L McLean Juan F Medrano Barbara T Moreno Daniela D Moré Carl T Muntean Hari P Nandakumar Marcelo F G Nogueira Ingrid Olsaker Sameer D Pant Francesca Panzitta Rosemeire C P Pastor Mario A Poli Nathan Poslusny Satyanarayana Rachagani Shoba Ranganathan Andrej Razpet Penny K Riggs Gonzalo Rincon Nelida Rodriguez-Osorio Sandra L Rodriguez-Zas Natasha E Romero Anne Rosenwald Lillian Sando Sheila M Schmutz Libing Shen Laura Sherman Bruce R Southey Ylva Strandberg Lutzow Jonathan V Sweedler Imke Tammen Bhanu Prakash V L Telugu Jennifer M Urbanski Yuri T Utsunomiya Chris P Verschoor Ashley J Waardenberg Zhiquan Wang Robert Ward Rosemarie Weikard Thomas H Welsh Stephen N White Laurens G Wilming Kris R Wunderlich Jianqi Yang Feng-Qi Zhao

Science 2009 Apr;324(5926):522-8

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http://dx.doi.org/10.1126/science.1169588DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2943200PMC
April 2009

Genome-wide survey of SNP variation uncovers the genetic structure of cattle breeds.

Science 2009 Apr;324(5926):528-32

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http://dx.doi.org/10.1126/science.1167936DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2735092PMC
April 2009

Screening for replication of genome-wide SNP associations in sporadic ALS.

Eur J Hum Genet 2009 Feb 5;17(2):213-8. Epub 2008 Nov 5.

Department of Clinical Neurological Sciences, Royal College of Surgeons in Ireland, Dublin 2, Ireland.

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http://www.nature.com/articles/ejhg2008194
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http://dx.doi.org/10.1038/ejhg.2008.194DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2986065PMC
February 2009

Analysis of genome-wide copy number variation in Irish and Dutch ALS populations.

Hum Mol Genet 2008 Nov 7;17(21):3392-8. Epub 2008 Aug 7.

Department of Clinical Neurological Sciences, Royal College of Surgeons in Ireland, Dublin, Ireland.

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https://academic.oup.com/hmg/article-lookup/doi/10.1093/hmg/
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http://dx.doi.org/10.1093/hmg/ddn233DOI Listing
November 2008

Detecting the effects of selection at the population level in six bovine immune genes.

BMC Genet 2008 Oct 6;9:62. Epub 2008 Oct 6.

Smurfit Institute of Genetics, Trinity College, Dublin 2, Ireland.

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http://dx.doi.org/10.1186/1471-2156-9-62DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2576349PMC
October 2008

Genetic investigation of the patrilineal kinship structure of early medieval Ireland.

Am J Phys Anthropol 2008 Aug;136(4):415-22

School of Genetics and Microbiology, Trinity College, Dublin 2, Ireland.

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http://dx.doi.org/10.1002/ajpa.20823DOI Listing
August 2008

combi.pl: a computer program to combine data sets with inconsistent microsatellite marker allele size information.

Mol Ecol Resour 2008 May;8(3):572-4

Insitute of Animal Breeding and Genetics, University of Göttingen, Albrecht-Thaer-Weg 3, 37075 Göttingen, Germany, Smurfit Institute of Genetics, Trinity College Dublin, Dublin 2, Ireland.

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http://dx.doi.org/10.1111/j.1471-8286.2007.02011.xDOI Listing
May 2008

Discovery of alpha-defensins in basal mammals.

Dev Comp Immunol 2007 2;31(10):963-7. Epub 2007 Mar 2.

Smurfit Institute of Genetics, Trinity College Dublin, Dublin 2, Ireland.

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http://dx.doi.org/10.1016/j.dci.2007.01.007DOI Listing
October 2007

Measuring European population stratification with microarray genotype data.

Am J Hum Genet 2007 May 22;80(5):948-56. Epub 2007 Mar 22.

Department of Anthropology, Pennsylvania State University, University Park, PA 16801, USA.

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http://dx.doi.org/10.1086/513477DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1852743PMC
May 2007

Genetic evidence for the convergent evolution of light skin in Europeans and East Asians.

Mol Biol Evol 2007 Mar 20;24(3):710-22. Epub 2006 Dec 20.

Department of Anthropology, The Pennsylvania State University, PA, USA.

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http://dx.doi.org/10.1093/molbev/msl203DOI Listing
March 2007

Evidence of positive selection on the Atlantic salmon CD3gammadelta gene.

Immunogenetics 2007 Mar 9;59(3):225-32. Epub 2007 Jan 9.

Smurfit Institute of Genetics, Trinity College Dublin, Dublin 2, Ireland.

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http://dx.doi.org/10.1007/s00251-006-0188-0DOI Listing
March 2007

The scale and nature of Viking settlement in Ireland from Y-chromosome admixture analysis.

Eur J Hum Genet 2006 Dec 6;14(12):1288-94. Epub 2006 Sep 6.

Smurfit Institute of Genetics, Trinity College, Dublin 2, Ireland.

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http://dx.doi.org/10.1038/sj.ejhg.5201709DOI Listing
December 2006

Genetic signatures of a Mediterranean influence in Iberian Peninsula sheep husbandry.

Mol Biol Evol 2006 Jul 3;23(7):1420-6. Epub 2006 May 3.

Instituto de Patologia e Imunologia Molecular da Universidade do Porto (IPATIMUP), Rua Dr Roberto Frias s/n, Porto, Portugal.

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http://dx.doi.org/10.1093/molbev/msl007DOI Listing
July 2006

Evaluating the forensic informativeness of mtDNA haplogroup H sub-typing on a Eurasian scale.

Forensic Sci Int 2006 May 1;159(1):43-50. Epub 2005 Aug 1.

Instituto de Patologia e Imunologia Molecular da Universidade do Porto, R. Dr. Roberto Frias s/n, 4200-465 Porto, Portugal.

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http://dx.doi.org/10.1016/j.forsciint.2005.06.008DOI Listing
May 2006

Y-chromosomes and the extent of patrilineal ancestry in Irish surnames.

Hum Genet 2006 Mar 12;119(1-2):212-9. Epub 2006 Jan 12.

Smurfit Institute of Genetics, Trinity College, Dublin 2, Ireland.

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http://dx.doi.org/10.1007/s00439-005-0131-8DOI Listing
March 2006

Documenting domestication: the intersection of genetics and archaeology.

Trends Genet 2006 Mar 3;22(3):139-55. Epub 2006 Feb 3.

Archaeobiology Program, National Museum of Natural History, Smithsonian Institution, Washington, DC 20560-0112, USA.

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http://dx.doi.org/10.1016/j.tig.2006.01.007DOI Listing
March 2006

A Y-chromosome signature of hegemony in Gaelic Ireland.

Am J Hum Genet 2006 Feb 8;78(2):334-8. Epub 2005 Dec 8.

Smurfit Institute of Genetics, Trinity College, Dublin, Ireland.

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http://linkinghub.elsevier.com/retrieve/pii/S000292970762363
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http://dx.doi.org/10.1086/500055DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1380239PMC
February 2006

Microsatellite diversity suggests different histories for Mediterranean and Northern European cattle populations.

Proc Biol Sci 2005 Sep;272(1574):1837-43

Laboratory of Cytogenetics, ICBAS, Abel Salazar Institute for Biomedical Sciences, CECA, Center for the Study of Animal Sciences, 4099-003 Porto, Portugal.

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http://dx.doi.org/10.1098/rspb.2005.3138DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1559860PMC
September 2005

Genetic stratification of pathogen-response-related and other variants within a homogeneous Caucasian Irish population.

Eur J Hum Genet 2005 Jul;13(7):798-806

Institute for Biopharmaceutical Sciences, Royal College of Surgeons in Ireland, 123 St Stephen's Green, Dublin 2, Ireland.

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http://dx.doi.org/10.1038/sj.ejhg.5201382DOI Listing
July 2005

The Longue Durée of genetic ancestry: multiple genetic marker systems and Celtic origins on the Atlantic facade of Europe.

Am J Hum Genet 2004 Oct 12;75(4):693-702. Epub 2004 Aug 12.

Department of Genetics, Trinity College, Dublin, Ireland.

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http://dx.doi.org/10.1086/424697DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1182057PMC
October 2004

Gene-culture coevolution between cattle milk protein genes and human lactase genes.

Nat Genet 2003 Dec 23;35(4):311-3. Epub 2003 Nov 23.

Laboratoire d'Ecologie Alpine, Génomique des Populations et Biodiversité, CNRS UMR 5553, Université Joseph Fourier, B.P. 53, 38041 Grenoble, Cedex 9, France.

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http://dx.doi.org/10.1038/ng1263DOI Listing
December 2003

DNA markers reveal the complexity of livestock domestication.

Nat Rev Genet 2003 Nov;4(11):900-10

Cardiff School of Biosciences, Main Building, Cathay Park, PO Box 915, Cardiff CF10 3TL, UK.

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http://dx.doi.org/10.1038/nrg1203DOI Listing
November 2003

African pastoralism: genetic imprints of origins and migrations.

Science 2002 Apr;296(5566):336-9

International Livestock Research Institute, Post Office Box 30709, Nairobi, Kenya.

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http://dx.doi.org/10.1126/science.1069878DOI Listing
April 2002