Daniel F Voytas

Daniel F Voytas

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Daniel F Voytas

Publications by authors named "Daniel F Voytas"

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Genome Editing in Potato with CRISPR/Cas9.

Methods Mol Biol 2019 ;1917:183-201

Department of Plant, Soil and Microbial Sciences, Michigan State University, East Lansing, MI, USA.

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http://link.springer.com/10.1007/978-1-4939-8991-1_14
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http://dx.doi.org/10.1007/978-1-4939-8991-1_14DOI Listing
June 2019

Evaluation of Methods to Assess Activity of Engineered Genome-Editing Nucleases in Protoplasts.

Front Plant Sci 2019 8;10:110. Epub 2019 Feb 8.

Department of Plant, Soil and Microbial Sciences, Michigan State University, East Lansing, MI, United States.

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http://dx.doi.org/10.3389/fpls.2019.00110DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6376315PMC
February 2019

ZFN, TALEN and CRISPR-Cas9 mediated homology directed gene insertion in Arabidopsis: A disconnect between somatic and germinal cells.

J Genet Genomics 2018 12 10;45(12):681-684. Epub 2018 Oct 10.

Department of Biology, East Carolina University, Greenville, NC 27858, USA; Department of Plant Science and Landscape Architecture, University of Maryland, College Park, MD 20742, USA; Institute for Bioscience and Biotechnology Research, University of Maryland, Rockville, MD 20850, USA. Electronic address:

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http://dx.doi.org/10.1016/j.jgg.2018.07.011DOI Listing
December 2018

Novel alleles of rice eIF4G generated by CRISPR/Cas9-targeted mutagenesis confer resistance to Rice tungro spherical virus.

Plant Biotechnol J 2018 11 30;16(11):1918-1927. Epub 2018 Apr 30.

Genetics and Biotechnology Division, International Rice Research Institute (IRRI), Metro Manila, Philippines.

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http://doi.wiley.com/10.1111/pbi.12927
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http://dx.doi.org/10.1111/pbi.12927DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6181218PMC
November 2018

Genome Editing for Crop Improvement - Applications in Clonally Propagated Polyploids With a Focus on Potato ( L.).

Front Plant Sci 2018 13;9:1607. Epub 2018 Nov 13.

Department of Plant, Soil and Microbial Sciences, Michigan State University, East Lansing, MI, United States.

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http://dx.doi.org/10.3389/fpls.2018.01607DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6243044PMC
November 2018

De novo domestication of wild tomato using genome editing.

Nat Biotechnol 2018 Oct 1. Epub 2018 Oct 1.

Departamento de Ciências Biológicas, Escola Superior de Agricultura "Luiz de Queiroz," Universidade de São Paulo, Piracicaba, Brazil.

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http://www.nature.com/doifinder/10.1038/nbt.4272
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http://dx.doi.org/10.1038/nbt.4272DOI Listing
October 2018

Synthetic genomes engineered by SCRaMbLEing.

Sci China Life Sci 2018 08 26;61(8):975-977. Epub 2018 Jun 26.

Department of Genetics, Cell Biology and Development, University of Minnesota, Minneapolis, MN, 55108, USA.

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http://dx.doi.org/10.1007/s11427-018-9325-1DOI Listing
August 2018

Editing plant genes one base at a time.

Nat Plants 2018 07;4(7):412-413

Department of Genetics, Cell Biology and Development and the Center for Genome Engineering, University of Minnesota, Minneapolis, MN, USA.

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http://dx.doi.org/10.1038/s41477-018-0177-yDOI Listing
July 2018

Essential nucleotide- and protein-dependent functions of /β-actin.

Proc Natl Acad Sci U S A 2018 07 16;115(31):7973-7978. Epub 2018 Jul 16.

Department of Biology, Indiana University-Purdue University Indianapolis, Indianapolis, IN 46202;

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http://dx.doi.org/10.1073/pnas.1807895115DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6077724PMC
July 2018

Genome Engineering and Agriculture: Opportunities and Challenges.

Prog Mol Biol Transl Sci 2017 3;149:1-26. Epub 2017 May 3.

Calyxt, Inc., New Brighton, MN, United States.

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https://linkinghub.elsevier.com/retrieve/pii/S18771173173004
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http://dx.doi.org/10.1016/bs.pmbts.2017.03.011DOI Listing
April 2018

Low-gluten, nontransgenic wheat engineered with CRISPR/Cas9.

Plant Biotechnol J 2018 04 24;16(4):902-910. Epub 2017 Nov 24.

Departamento de Mejora Genética Vegetal, Instituto de Agricultura Sostenible (IAS-CSIC), Córdoba, Spain.

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http://doi.wiley.com/10.1111/pbi.12837
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http://dx.doi.org/10.1111/pbi.12837DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5867031PMC
April 2018

Targeted mutagenesis in wheat microspores using CRISPR/Cas9.

Sci Rep 2018 04 25;8(1):6502. Epub 2018 Apr 25.

Canadian Wheat Improvement Flagship Program, National Research Council Canada, 110 Gymnasium Place, Saskatoon, SK, S7N 0W9, Canada.

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http://dx.doi.org/10.1038/s41598-018-24690-8DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5916876PMC
April 2018

Robust Transcriptional Activation in Plants Using Multiplexed CRISPR-Act2.0 and mTALE-Act Systems.

Mol Plant 2018 02 29;11(2):245-256. Epub 2017 Nov 29.

Department of Biology, East Carolina University, Greenville, NC 27858, USA; Department of Plant Science and Landscape Architecture, University of Maryland, College Park, MD 20742, USA; Institute for Bioscience and Biotechnology Research, University of Maryland, Rockville, MD 20850, USA. Electronic address:

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https://linkinghub.elsevier.com/retrieve/pii/S16742052173034
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http://dx.doi.org/10.1016/j.molp.2017.11.010DOI Listing
February 2018

Evaluation of the mature grain phytase candidate HvPAPhy_a gene in barley (Hordeum vulgare L.) using CRISPR/Cas9 and TALENs.

Plant Mol Biol 2017 Sep 28;95(1-2):111-121. Epub 2017 Jul 28.

Department of Molecular Biology and Genetics, Research Centre Flakkebjerg, Aarhus University, Slagelse, Denmark.

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http://dx.doi.org/10.1007/s11103-017-0640-6DOI Listing
September 2017

Downregulation of Gene Ameliorates Metabolic and Cardiac Traits in the Spontaneously Hypertensive Rat.

Hypertension 2017 06 10;69(6):1084-1091. Epub 2017 Apr 10.

From the Institute of Biology and Medical Genetics, First Faculty of Medicine, Charles University, Prague, Czech Republic (F.L., O.Š., V.K., M.P.); Institute of Physiology (V.L., V.Z., P.M., J.Š., M.Š., M.P.) and Institute of Molecular Genetics (H.S.), Czech Academy of Sciences, Prague, Czech Republic; Institute for Experimental Medicine, Prague, Czech Republic (J.T., V.Š., L.K.); Department of Genetics, Cell Biology, and Development and Center for Genome Engineering, University of Minnesota, Minneapolis (C.G.S., D.F.V.); Max-Delbrück-Center for Molecular Medicine in the Hemholtz Society, Berlin, Germany (Z.I.); and Department of Molecular Medicine "Sapienza" University of Rome, Italy (M.M.).

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http://dx.doi.org/10.1161/HYPERTENSIONAHA.116.08798DOI Listing
June 2017

A Multipurpose Toolkit to Enable Advanced Genome Engineering in Plants.

Plant Cell 2017 Jun 18;29(6):1196-1217. Epub 2017 May 18.

Department of Genetics, Cell Biology, and Development and Center for Genome Engineering, University of Minnesota, Minneapolis, Minnesota 55455

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http://dx.doi.org/10.1105/tpc.16.00922DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5502448PMC
June 2017

High-efficiency gene targeting in hexaploid wheat using DNA replicons and CRISPR/Cas9.

Plant J 2017 Mar 13;89(6):1251-1262. Epub 2017 Feb 13.

Department of Genetics, Cell Biology, and Development, Center for Genome Engineering, University of Minnesota, Minneapolis, MN, 55455, USA.

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http://dx.doi.org/10.1111/tpj.13446DOI Listing
March 2017

Gene expression atlas for the food security crop cassava.

New Phytol 2017 Mar 24;213(4):1632-1641. Epub 2017 Jan 24.

Donald Danforth Plant Science Center, 975 North Warson Road, St Louis, MO, 63132, USA.

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http://dx.doi.org/10.1111/nph.14443DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5516207PMC
March 2017

Validating Genome-Wide Association Candidates Controlling Quantitative Variation in Nodulation.

Plant Physiol 2017 02 5;173(2):921-931. Epub 2017 Jan 5.

Department of Plant Pathology (S.J.C., R.D., N.D.Y.) and Department of Plant Biology (P.T., J.G., D.T., L.B., N.D.Y.), University of Minnesota, St. Paul, Minnesota 55108;

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http://dx.doi.org/10.1104/pp.16.01923DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5291020PMC
February 2017

A CRISPR-Cpf1 system for efficient genome editing and transcriptional repression in plants.

Nat Plants 2017 02 17;3:17018. Epub 2017 Feb 17.

Department of Plant Science and Landscape Architecture, University of Maryland, College Park, Maryland 20742, USA.

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http://dx.doi.org/10.1038/nplants.2017.18DOI Listing
February 2017

Highly efficient gene tagging in the bryophyte Physcomitrella patens using the tobacco (Nicotiana tabacum) Tnt1 retrotransposon.

New Phytol 2016 Nov 22;212(3):759-769. Epub 2016 Aug 22.

Center for Research in Agricultural Genomics, CRAG (CSIC-IRTA-UAB-UB), Campus UAB, Cerdanyola del Vallès, 08193, Barcelona, Spain.

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http://dx.doi.org/10.1111/nph.14152DOI Listing
November 2016

Vimentin Intermediate Filaments Template Microtubule Networks to Enhance Persistence in Cell Polarity and Directed Migration.

Cell Syst 2016 09 22;3(3):252-263.e8. Epub 2016 Sep 22.

Department of Cell Biology, University of Texas Southwestern Medical Center at Dallas, Dallas, TX 75235, USA; Department of Cell Biology, Harvard Medical School, Boston, MA 02115, USA. Electronic address:

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5055390PMC
http://dx.doi.org/10.1016/j.cels.2016.08.007DOI Listing
September 2016

Geminivirus-Mediated Genome Editing in Potato (Solanum tuberosum L.) Using Sequence-Specific Nucleases.

Front Plant Sci 2016 21;7:1045. Epub 2016 Jul 21.

Department of Plant, Soils and Microbial Sciences, Michigan State University, East Lansing MI, USA.

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http://dx.doi.org/10.3389/fpls.2016.01045DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4955380PMC
August 2016

A Single Transcript CRISPR-Cas9 System for Efficient Genome Editing in Plants.

Mol Plant 2016 07 19;9(7):1088-91. Epub 2016 May 19.

Department of Biotechnology, School of Life Sciences and Technology, University of Electronic Science and Technology of China, Chengdu 610054, China. Electronic address:

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http://dx.doi.org/10.1016/j.molp.2016.05.001DOI Listing
July 2016

Gene editing and its application for hematological diseases.

Int J Hematol 2016 Jul 27;104(1):18-28. Epub 2016 May 27.

University of Minnesota Twin Cities, Minneapolis, MN, USA.

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http://dx.doi.org/10.1007/s12185-016-2017-zDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5595242PMC
July 2016

Generation and Inheritance of Targeted Mutations in Potato (Solanum tuberosum L.) Using the CRISPR/Cas System.

PLoS One 2015 14;10(12):e0144591. Epub 2015 Dec 14.

Department of Plant, Soils and Microbial Sciences, Michigan State University, East Lansing, Michigan, 48824, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0144591PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4684367PMC
June 2016

Regulate genome-edited products, not genome editing itself.

Nat Biotechnol 2016 05;34(5):477-9

Department of Genetics, Cell Biology, and Development, University of Minnesota, Minneapolis, Minnesota, USA.

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http://dx.doi.org/10.1038/nbt.3566DOI Listing
May 2016

Editorial Prerogative and the Plant Genome.

Authors:
Daniel F Voytas

J Genet Genomics 2016 05 22;43(5):229-32. Epub 2016 Mar 22.

Department of Genetics, Cell Biology & Development and Center for Genome Engineering, University of Minnesota, Minneapolis, MN 55455, USA. Electronic address:

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http://dx.doi.org/10.1016/j.jgg.2016.03.004DOI Listing
May 2016

A Defect in DNA Ligase4 Enhances the Frequency of TALEN-Mediated Targeted Mutagenesis in Rice.

Plant Physiol 2016 Feb 14;170(2):653-66. Epub 2015 Dec 14.

Plant Genome Engineering Research Unit (A.N.-Y., H.S., A.M., S.T.), Rice Applied Genomics Research Unit (T.H., K.S.), and Advanced Genomics Laboratory (M.H., Y.K.), National Institute of Agrobiological Sciences, Tsukuba, Ibaraki 305-8602, Japan;Department of Genetics, Cell Biology, and Development and Center for Genome Engineering, University of Minnesota, Minneapolis, Minnesota 55455 (T.C., C.S., D.F.V.);Center for Collaboration among Agriculture, Industry, and Commerce, University of Tokushima, Tokushima 770-8503, Japan (K.O.); andKihara Institute for Biological Research, Yokohama City University, Yokohama 244-0813, Japan (S.T.)

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http://www.plantphysiol.org/content/170/2/653.full.pdf
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http://www.plantphysiol.org/lookup/doi/10.1104/pp.15.01542
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http://dx.doi.org/10.1104/pp.15.01542DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4734567PMC
February 2016

Histone H2AX and the small RNA pathway modulate both non-homologous end-joining and homologous recombination in plants.

Mutat Res 2016 Jan 4;783:9-14. Epub 2015 Dec 4.

Department of Genetics, Cell Biology & Development and Center for Genome Engineering, University of MN, Minneapolis, MN 55455, USA.

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http://dx.doi.org/10.1016/j.mrfmmm.2015.12.002DOI Listing
January 2016

High-frequency, precise modification of the tomato genome.

Genome Biol 2015 Nov 6;16:232. Epub 2015 Nov 6.

Department of Genetics, Cell Biology & Development and Center for Genome Engineering, University of Minnesota, Minneapolis, Minnesota, 55455, USA.

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http://dx.doi.org/10.1186/s13059-015-0796-9DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4635538PMC
November 2015

Accelerating research through reagent repositories: the genome editing example.

Genome Biol 2015 Nov 20;16:255. Epub 2015 Nov 20.

Addgene, Cambridge, MA, 02139, USA.

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http://dx.doi.org/10.1186/s13059-015-0830-yDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4653914PMC
November 2015

A CRISPR/Cas9 Toolbox for Multiplexed Plant Genome Editing and Transcriptional Regulation.

Plant Physiol 2015 Oct 21;169(2):971-85. Epub 2015 Aug 21.

Department of Biology, East Carolina University, Greenville, North Carolina 27858 (L.G.L., J.W.P., Y.Q.);Department of Biotechnology, School of Life Sciences and Technology, University of Electronic Science and Technology of China, Chengdu 610054, China (D.Z., X.T., X.Z., Y.Z.);Department of Genetics, Cell Biology, and Development and Center for Genome Engineering, University of Minnesota, Minneapolis, Minnesota 55455 (N.J.B., D.F.V.); andDepartment of Plant and Microbial Biology and Plants for Human Health Institute, North Carolina State University, North Carolina Research Campus, Kannapolis, North Carolina 28081 (T.-F.H.)

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http://dx.doi.org/10.1104/pp.15.00636DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4587453PMC
October 2015

Non-transgenic Plant Genome Editing Using Purified Sequence-Specific Nucleases.

Mol Plant 2015 Sep 12;8(9):1425-7. Epub 2015 Jun 12.

Cellectis Plant Sciences, 600 County Road D West, Suite 8, New Brighton, MN 55112, USA.

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http://dx.doi.org/10.1016/j.molp.2015.05.012DOI Listing
September 2015

Efficient Virus-Mediated Genome Editing in Plants Using the CRISPR/Cas9 System.

Mol Plant 2015 Aug 6;8(8):1288-91. Epub 2015 Mar 6.

Division of Biological Sciences & Center for Desert Agriculture, 4700 King Abdullah University of Science and Technology, Thuwal 23955-6900, Kingdom of Saudi Arabia. Electronic address:

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http://dx.doi.org/10.1016/j.molp.2015.02.011DOI Listing
August 2015

Efficient design and assembly of custom TALENs using the Golden Gate platform.

Methods Mol Biol 2015 ;1239:133-59

Department of Genetics, Cell Biology & Development, University of Minnesota, 350 Cargill Building, 1500 Gortner Avenue, St. Paul, MN, 55108-1023, USA.

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http://dx.doi.org/10.1007/978-1-4939-1862-1_7DOI Listing
July 2015

Retrotransposons. An RNA polymerase III subunit determines sites of retrotransposon integration.

Science 2015 May;348(6234):585-8

Université Paris Diderot, Sorbonne Paris Cité, INSERM U944, CNRS UMR 7212, Institut Universitaire d'Hématologie, Hôpital St. Louis, 75010 Paris, France.

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http://dx.doi.org/10.1126/science.1259114DOI Listing
May 2015

Enabling plant synthetic biology through genome engineering.

Trends Biotechnol 2015 Feb 12;33(2):120-31. Epub 2014 Dec 12.

Department of Genetics, Cell Biology, and Development, and Center for Genome Engineering, University of Minnesota, Minneapolis, MN 55455, USA. Electronic address:

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http://dx.doi.org/10.1016/j.tibtech.2014.11.008DOI Listing
February 2015

Fanconi anemia gene editing by the CRISPR/Cas9 system.

Hum Gene Ther 2015 Feb;26(2):114-26

1 Department of Pediatrics, Division of Blood and Marrow Transplantation, University of Minnesota , Minneapolis, MN 55455.

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http://dx.doi.org/10.1089/hum.2014.111DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4326027PMC
February 2015

Targeted mutagenesis of the tomato PROCERA gene using transcription activator-like effector nucleases.

Plant Physiol 2014 Nov 12;166(3):1288-91. Epub 2014 Sep 12.

Department of Plant Biology and Microbial and Plant Genomics Institute, University of Minnesota, St. Paul, Minnesota 55108 (V.S.L., N.E.O.);Department of Genetics, Cell Biology, and Development and Center for Genome Engineering, University of Minnesota, Minneapolis, Minnesota 55455 (C.G.S., D.F.V.); andInstitute of Plant Sciences and Genetics in Agriculture, Robert H. Smith Faculty of Agriculture, Food, and Environment, Hebrew University of Jerusalem, Rehovot 76100, Israel (D.W.)

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http://dx.doi.org/10.1104/pp.114.247593DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4226374PMC
November 2014

Wheat rescued from fungal disease.

Nat Biotechnol 2014 Sep;32(9):886-7

Department of Genetics, Cell Biology, and Development and Center for Genome Engineering, University of Minnesota, Minneapolis, Minnesota, USA.

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http://www.nature.com/articles/nbt.3013
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http://dx.doi.org/10.1038/nbt.3013DOI Listing
September 2014

Precision genome engineering and agriculture: opportunities and regulatory challenges.

PLoS Biol 2014 Jun 10;12(6):e1001877. Epub 2014 Jun 10.

State Key Laboratory of Plant Cell and Chromosome Engineering, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China.

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http://dx.plos.org/10.1371/journal.pbio.1001877
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http://dx.doi.org/10.1371/journal.pbio.1001877DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4051594PMC
June 2014

Tailor-made mutations in Arabidopsis using zinc finger nucleases.

Methods Mol Biol 2014 ;1062:193-209

Department of Genetics, Cell Biology & Development and Center for Genome Engineering, University of Minnesota, Minneapolis, MN, USA.

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http://dx.doi.org/10.1007/978-1-62703-580-4_10DOI Listing
April 2014

Mouse genome engineering using designer nucleases.

J Vis Exp 2014 Apr 2(86). Epub 2014 Apr 2.

Institute of Laboratory Animal Science, University of Zurich;

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http://dx.doi.org/10.3791/50930DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4161146PMC
April 2014

Targeted mutagenesis for functional analysis of gene duplication in legumes.

Methods Mol Biol 2013 ;1069:25-42

Department of Agronomy and Plant Genetics, University of Minnesota, St. Paul, MN, USA.

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http://dx.doi.org/10.1007/978-1-62703-613-9_3DOI Listing
March 2014

DNA replicons for plant genome engineering.

Plant Cell 2014 Jan 17;26(1):151-63. Epub 2014 Jan 17.

Department of Genetics, Cell Biology, and Development, Center for Genome Engineering, University of Minesota, Mineapolis, Minesota 55455.

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http://dx.doi.org/10.1105/tpc.113.119792DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3963565PMC
January 2014

TAL effector nucleases induce mutations at a pre-selected location in the genome of primary barley transformants.

Plant Mol Biol 2013 Oct 21;83(3):279-85. Epub 2013 May 21.

Research Centre Flakkebjerg, Department of Molecular Biology and Genetics, Aarhus University, Slagelse, Denmark,

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http://dx.doi.org/10.1007/s11103-013-0078-4DOI Listing
October 2013

Targeted deletion and inversion of tandemly arrayed genes in Arabidopsis thaliana using zinc finger nucleases.

G3 (Bethesda) 2013 Oct 3;3(10):1707-15. Epub 2013 Oct 3.

Department of Genetics, Cell Biology & Development and Center for Genome Engineering, University of Minnesota, Minneapolis, Minnesota 55455.

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http://dx.doi.org/10.1534/g3.113.006270DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3789795PMC
October 2013

Targeted mutagenesis of Arabidopsis thaliana using engineered TAL effector nucleases.

G3 (Bethesda) 2013 Oct 3;3(10):1697-705. Epub 2013 Oct 3.

Department of Genetics, Cell Biology, and Development and Center for Genome Engineering, University of Minnesota, Minneapolis, Minnesota 55455.

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http://dx.doi.org/10.1534/g3.113.007104DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3789794PMC
October 2013

TALEN-engineered AR gene rearrangements reveal endocrine uncoupling of androgen receptor in prostate cancer.

Proc Natl Acad Sci U S A 2013 Oct 7;110(43):17492-7. Epub 2013 Oct 7.

Masonic Cancer Center, Graduate Program in Molecular, Cellular, and Developmental Biology and Genetics, and Biostatistics and Bioinformatics Core, Masonic Cancer Center, University of Minnesota, Minneapolis, MN 55455.

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http://www.pnas.org/cgi/doi/10.1073/pnas.1308587110
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http://dx.doi.org/10.1073/pnas.1308587110DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3808622PMC
October 2013

TAL effectors: highly adaptable phytobacterial virulence factors and readily engineered DNA-targeting proteins.

Trends Cell Biol 2013 Aug 23;23(8):390-8. Epub 2013 May 23.

Department of Plant Pathology and Microbiology, Iowa State University, 351 Bessey Hall, Ames, IA 50011, USA.

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http://dx.doi.org/10.1016/j.tcb.2013.04.003DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3729746PMC
August 2013

Plant genome engineering with sequence-specific nucleases.

Authors:
Daniel F Voytas

Annu Rev Plant Biol 2013 1;64:327-50. Epub 2013 Mar 1.

Department of Genetics, Cell Biology, and Development and Center for Genome Engineering, University of Minnesota, Minneapolis, MN 55455, USA.

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http://www.annualreviews.org/doi/10.1146/annurev-arplant-042
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http://dx.doi.org/10.1146/annurev-arplant-042811-105552DOI Listing
July 2013

Increasing frequencies of site-specific mutagenesis and gene targeting in Arabidopsis by manipulating DNA repair pathways.

Genome Res 2013 Mar 2;23(3):547-54. Epub 2013 Jan 2.

Department of Genetics, Cell Biology & Development and Center for Genome Engineering, University of Minnesota, Minneapolis, MN 55455, USA.

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http://genome.cshlp.org/cgi/doi/10.1101/gr.145557.112
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http://dx.doi.org/10.1101/gr.145557.112DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3589543PMC
March 2013

Targeting G with TAL effectors: a comparison of activities of TALENs constructed with NN and NK repeat variable di-residues.

PLoS One 2012 24;7(9):e45383. Epub 2012 Sep 24.

Department of Genetics, Cell Biology & Development and Center for Genome Engineering, University of Minnesota, Minneapolis, Minnesota, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0045383PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3454392PMC
February 2013

Transcription activator-like effector nucleases enable efficient plant genome engineering.

Plant Physiol 2013 Jan 2;161(1):20-7. Epub 2012 Nov 2.

Department of Biotechnology, School of Life Sciences and Technology, University of Electronic Science and Technology of China, Chendu 610054, People's Republic of China.

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http://dx.doi.org/10.1104/pp.112.205179DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3532252PMC
January 2013

Zinc Finger Database (ZiFDB) v2.0: a comprehensive database of C₂H₂ zinc fingers and engineered zinc finger arrays.

Nucleic Acids Res 2013 Jan 29;41(Database issue):D452-5. Epub 2012 Nov 29.

Department of Genetics, University of Minnesota, 6-160 Jackson Hall, 321 Church Street SE, Minneapolis, MN 55455, USA.

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http://dx.doi.org/10.1093/nar/gks1167DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3531203PMC
January 2013

Efficient TALEN-mediated gene knockout in livestock.

Proc Natl Acad Sci U S A 2012 Oct 1;109(43):17382-7. Epub 2012 Oct 1.

Center for Genome Engineering and Department of Animal Science, University of Minnesota, St Paul, MN 55108, USA.

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http://www.pnas.org/cgi/doi/10.1073/pnas.1211446109
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http://dx.doi.org/10.1073/pnas.1211446109DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3491456PMC
October 2012

TAL Effector-Nucleotide Targeter (TALE-NT) 2.0: tools for TAL effector design and target prediction.

Nucleic Acids Res 2012 Jul 12;40(Web Server issue):W117-22. Epub 2012 Jun 12.

Department of Plant Pathology and Microbiology, Iowa State University, Ames, IA 50011, USA.

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http://dx.doi.org/10.1093/nar/gks608DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3394250PMC
July 2012

A nucleosomal surface defines an integration hotspot for the Saccharomyces cerevisiae Ty1 retrotransposon.

Genome Res 2012 Apr 4;22(4):704-13. Epub 2012 Jan 4.

Department of Genetics, Cell Biology & Development and Center for Genome Engineering, University of Minnesota, Minneapolis, Minnesota 55455, USA.

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http://genome.cshlp.org/content/early/2012/01/04/gr.129585.1
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http://genome.cshlp.org/cgi/doi/10.1101/gr.129585.111
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http://dx.doi.org/10.1101/gr.129585.111DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3317152PMC
April 2012

Access to DNA establishes a secondary target site bias for the yeast retrotransposon Ty5.

Proc Natl Acad Sci U S A 2011 Dec 25;108(51):20351-6. Epub 2011 Jul 25.

Department of Genetics, Cell Biology, and Development, and Center for Genome Engineering, University of Minnesota, Minneapolis, MN 55455, USA.

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http://dx.doi.org/10.1073/pnas.1103665108DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3251128PMC
December 2011

A TALE of two nucleases: gene targeting for the masses?

Zebrafish 2011 Sep;8(3):147-9

Department of Biochemistry and Molecular Biology, Mayo Addiction Research Center, Mayo Clinic, Rochester, Minnesota 55905, USA.

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http://dx.doi.org/10.1089/zeb.2011.9993DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3174730PMC
September 2011

TAL effectors: customizable proteins for DNA targeting.

Science 2011 Sep;333(6051):1843-6

Department of Plant Pathology, 351 Bessey Hall, Iowa State University, Ames, IA 50011, USA.

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http://www.sciencemag.org/cgi/doi/10.1126/science.1204094
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http://dx.doi.org/10.1126/science.1204094DOI Listing
September 2011

Efficient design and assembly of custom TALEN and other TAL effector-based constructs for DNA targeting.

Nucleic Acids Res 2011 Jul 14;39(12):e82. Epub 2011 Apr 14.

Department of Genetics, Cell Biology & Development and Center for Genome Engineering, 321 Church Street SE, University of Minnesota, Minneapolis, MN 55455, USA.

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http://dx.doi.org/10.1093/nar/gkr218DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3130291PMC
July 2011

Targeted mutagenesis in Arabidopsis using zinc-finger nucleases.

Methods Mol Biol 2011 ;701:167-77

Department of Genetics, Cell Biology, and Development and Center for Genome Engineering, University of Minnesota, Minneapolis, MN, USA.

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http://dx.doi.org/10.1007/978-1-61737-957-4_9DOI Listing
April 2011

A transient assay for monitoring zinc finger nuclease activity at endogenous plant gene targets.

Methods Mol Biol 2010 ;649:299-313

Department of Genetics, Cell Biology and Development and Center for Genome Engineering, University of Minnesota, Minneapolis, MN, USA.

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http://dx.doi.org/10.1007/978-1-60761-753-2_19DOI Listing
December 2010

Predicting success of oligomerized pool engineering (OPEN) for zinc finger target site sequences.

BMC Bioinformatics 2010 Nov 2;11:543. Epub 2010 Nov 2.

Molecular Pathology Unit, Center for Cancer Research, and Center for Computational and Integrative Biology, Massachusetts General Hospital, Charlestown, MA 02129, USA.

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http://dx.doi.org/10.1186/1471-2105-11-543DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3098093PMC
November 2010

Targeting DNA double-strand breaks with TAL effector nucleases.

Genetics 2010 Oct 26;186(2):757-61. Epub 2010 Jul 26.

Department of Plant Pathology, Iowa State University, Ames, Iowa 50011, USA.

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http://dx.doi.org/10.1534/genetics.110.120717DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2942870PMC
October 2010

Retrotransposon vectors for gene delivery in plants.

Mob DNA 2010 Aug 2;1(1):19. Epub 2010 Aug 2.

Department of Genetics, Cell Biology and Development and Center for Genome Engineering, University of Minnesota, Minneapolis, Minnesota USA 55455, USA.

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http://dx.doi.org/10.1186/1759-8753-1-19DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2923131PMC
August 2010

Meeting report for mobile DNA 2010.

Mob DNA 2010 Aug 24;1(1):20. Epub 2010 Aug 24.

Department of Genetics, Cell Biology & Development, The University of Minnesota, Minneapolis, MN 55455, USA.

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http://dx.doi.org/10.1186/1759-8753-1-20DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2936281PMC
August 2010

ZiFiT (Zinc Finger Targeter): an updated zinc finger engineering tool.

Nucleic Acids Res 2010 Jul 30;38(Web Server issue):W462-8. Epub 2010 Apr 30.

Molecular Pathology Unit, Center for Cancer Research, and Center for Computational and Integrative Biology, Massachusetts General Hospital, Charlestown, MA 02129, USA.

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http://dx.doi.org/10.1093/nar/gkq319DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2896148PMC
July 2010

High frequency targeted mutagenesis in Arabidopsis thaliana using zinc finger nucleases.

Proc Natl Acad Sci U S A 2010 Jun 27;107(26):12028-33. Epub 2010 May 27.

Department of Genetics, Cell Biology, and Development and Center for Genome Engineering, University of Minnesota, Minneapolis, MN 55455, USA.

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http://dx.doi.org/10.1073/pnas.0914991107DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2900673PMC
June 2010

Welcome to mobile DNA.

Mob DNA 2010 Jan 25;1(1). Epub 2010 Jan 25.

Department of Molecular Biology & Genetics, Johns Hopkins University School of Medicine, Baltimore, Maryland, USA.

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http://dx.doi.org/10.1186/1759-8753-1-1DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2836004PMC
January 2010