Daniel Catchpoole

Daniel Catchpoole

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Daniel Catchpoole

Publications by authors named "Daniel Catchpoole"

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Non-Coding RNAs in Pediatric Solid Tumors.

Front Genet 2019 20;10:798. Epub 2019 Sep 20.

School of Biomedical Engineering, University of Technology Sydney, Sydney, Australia.

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http://dx.doi.org/10.3389/fgene.2019.00798DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6764412PMC
September 2019

A C19MC-LIN28A-MYCN Oncogenic Circuit Driven by Hijacked Super-enhancers Is a Distinct Therapeutic Vulnerability in ETMRs: A Lethal Brain Tumor.

Cancer Cell 2019 Jul;36(1):51-67.e7

Arthur and Sonia Labatt Brain Tumor Research Centre, Division of Haematology/Oncology, Hospital for Sick Children, Toronto, ON M5G0A4, Canada; Department of Laboratory Medicine and Pathobiology, Faculty of Medicine, University of Toronto, Toronto, ON M5S1A8, Canada; Division of Hematology-Oncology, The Hospital for Sick Children, Department of Pediatrics, University of Toronto, Toronto, ON M5G0A4, Canada; Department of Medical Biophysics, Faculty of Medicine, University of Toronto, Toronto, ON M5G1L7, Canada. Electronic address:

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http://dx.doi.org/10.1016/j.ccell.2019.06.002DOI Listing
July 2019

ISBER's Global Outlook: A Summary of Recent International Activities.

Biopreserv Biobank 2019;17(1):91-92. Epub 2019 Jan 29.

5 International Agency for Research on Cancer (IARC), World Health Organization (WHO), Lyon, France.

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http://dx.doi.org/10.1089/bio.2019.29047.drcDOI Listing
June 2019

Biobank: What's in a Name?

Biopreserv Biobank 2019 Jun;17(3):204-208

5 Division of Anatomic Pathology, Department of Pathology, The University of Alabama at Birmingham (UAB), Birmingham, Alabama.

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http://dx.doi.org/10.1089/bio.2019.29053.mjbDOI Listing
June 2019

Visual Analytics of Genomic and Cancer Data: A Systematic Review.

Cancer Inform 2019 13;18:1176935119835546. Epub 2019 Mar 13.

The Tumour Bank, Children's Cancer Research Unit, Kids Research, The Children's Hospital at Westmead, Westmead, NSW, Australia.

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http://journals.sagepub.com/doi/10.1177/1176935119835546
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http://dx.doi.org/10.1177/1176935119835546DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6416684PMC
March 2019

Computer Aided Classification of Neuroblastoma Histological Images Using Scale Invariant Feature Transform with Feature Encoding.

Diagnostics (Basel) 2018 Aug 28;8(3). Epub 2018 Aug 28.

Centre for Artificial Intelligence, Faculty of Engineering and Information Technology, University of Technology Sydney, Ultimo, NSW 2007, Australia.

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http://dx.doi.org/10.3390/diagnostics8030056DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6165255PMC
August 2018

Convolutional Deep Belief Network with Feature Encoding for Classification of Neuroblastoma Histological Images.

J Pathol Inform 2018 2;9:17. Epub 2018 May 2.

Centre for Artificial Intelligence, Faculty of Engineering and Information Technology, University of Technology Sydney, NSW, Australia.

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http://dx.doi.org/10.4103/jpi.jpi_73_17DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5952548PMC
May 2018

Wnt Signalling Drives Context-Dependent Differentiation or Proliferation in Neuroblastoma.

Neoplasia 2018 04 3;20(4):335-350. Epub 2018 Mar 3.

Cancer Epigenetics Laboratory, School of Cellular and Molecular Medicine, University of Bristol, Bristol, UK. Electronic address:

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http://dx.doi.org/10.1016/j.neo.2018.01.009DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5909736PMC
April 2018

DBNorm: normalizing high-density oligonucleotide microarray data based on distributions.

BMC Bioinformatics 2017 Nov 29;18(1):527. Epub 2017 Nov 29.

School of Software, Faculty of Engineering and Information Technology and the Centre for Artificial Intelligence, University of Technology Sydney (UTS), PO Box 123, 15 Broadway, Ultimo, NSW, 2007, Australia.

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https://bmcbioinformatics.biomedcentral.com/articles/10.1186
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http://dx.doi.org/10.1186/s12859-017-1912-5DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5706403PMC
November 2017

Ensemble Feature Learning of Genomic Data Using Support Vector Machine.

PLoS One 2016 15;11(6):e0157330. Epub 2016 Jun 15.

Centre for Quantum Computation & Intelligent Systems (QCIS), Faculty of Engineering and Information Technology (FEIT), University of Technology Sydney (UTS), Broadway NSW 2007, Australia.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0157330PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4909287PMC
July 2017

Integrated (epi)-Genomic Analyses Identify Subgroup-Specific Therapeutic Targets in CNS Rhabdoid Tumors.

Authors:
Jonathon Torchia Brian Golbourn Shengrui Feng King Ching Ho Patrick Sin-Chan Alexandre Vasiljevic Joseph D Norman Paul Guilhamon Livia Garzia Natalia R Agamez Mei Lu Tiffany S Chan Daniel Picard Pasqualino de Antonellis Dong-Anh Khuong-Quang Aline C Planello Constanze Zeller Dalia Barsyte-Lovejoy Lucie Lafay-Cousin Louis Letourneau Mathieu Bourgey Man Yu Deena M A Gendoo Misko Dzamba Mark Barszczyk Tiago Medina Alexandra N Riemenschneider A Sorana Morrissy Young-Shin Ra Vijay Ramaswamy Marc Remke Christopher P Dunham Stephen Yip Ho-Keung Ng Jian-Qiang Lu Vivek Mehta Steffen Albrecht Jose Pimentel Jennifer A Chan Gino R Somers Claudia C Faria Lucia Roque Maryam Fouladi Lindsey M Hoffman Andrew S Moore Yin Wang Seung Ah Choi Jordan R Hansford Daniel Catchpoole Diane K Birks Nicholas K Foreman Doug Strother Almos Klekner Laszló Bognár Miklós Garami Péter Hauser Tibor Hortobágyi Beverly Wilson Juliette Hukin Anne-Sophie Carret Timothy E Van Meter Eugene I Hwang Amar Gajjar Shih-Hwa Chiou Hideo Nakamura Helen Toledano Iris Fried Daniel Fults Takafumi Wataya Chris Fryer David D Eisenstat Katrin Scheinemann Adam J Fleming Donna L Johnston Jean Michaud Shayna Zelcer Robert Hammond Samina Afzal David A Ramsay Nongnuch Sirachainan Suradej Hongeng Noppadol Larbcharoensub Richard G Grundy Rishi R Lulla Jason R Fangusaro Harriet Druker Ute Bartels Ronald Grant David Malkin C Jane McGlade Theodore Nicolaides Tarik Tihan Joanna Phillips Jacek Majewski Alexandre Montpetit Guillaume Bourque Gary D Bader Alyssa T Reddy G Yancey Gillespie Monika Warmuth-Metz Stefan Rutkowski Uri Tabori Mathieu Lupien Michael Brudno Ulrich Schüller Torsten Pietsch Alexander R Judkins Cynthia E Hawkins Eric Bouffet Seung-Ki Kim Peter B Dirks Michael D Taylor Anat Erdreich-Epstein Cheryl H Arrowsmith Daniel D De Carvalho James T Rutka Nada Jabado Annie Huang

Cancer Cell 2016 Dec;30(6):891-908

Department of Laboratory Medicine and Pathobiology, University of Toronto, Toronto, ON M5G0A4, Canada; Department of Paediatrics, University of Toronto, Toronto, ON M5G0A4, Canada; Division of Hematology/Oncology, Hospital for Sick Children, Toronto, ON M5G1X8, Canada; Arthur and Sonia Labatt Brain Tumour Research Centre, Hospital for Sick Children, Toronto, ON M5G1X8, Canada. Electronic address:

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http://dx.doi.org/10.1016/j.ccell.2016.11.003DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5500911PMC
December 2016

'Biohoarding': treasures not seen, stories not told.

J Health Serv Res Policy 2016 Apr 5;21(2):140-2. Epub 2015 Aug 5.

Associate Professor, The Tumour Bank, The Children's Cancer Research Unit, The Kids Research Institute, Westmead, NSW, Australia

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http://dx.doi.org/10.1177/1355819615599014DOI Listing
April 2016

Pheo-Type: A Diagnostic Gene-expression Assay for the Classification of Pheochromocytoma and Paraganglioma.

J Clin Endocrinol Metab 2016 Mar 21;101(3):1034-43. Epub 2016 Jan 21.

The Peter MacCallum Cancer Centre (A.F., A.H., P.J., A.T., R.J.H., R.W.T.), East Melbourne, Victoria, 3002 Australia; The Department of Pathology (R.W.T., A.F.), University of Melbourne, Parkville, Victoria 3010, Australia; Cancer Genetics (T.D., D.B., R.C.-B.), Kolling Institute of Medical Research, Royal North Shore Hospital, Sydney, New South Wales 2065, Australia; University of Sydney (T.D., D.B., A.J.G., R.C.-B.), Sydney, New South Wales 2006, Australia; The University of Queensland Diamantina Institute, Translational Research Institute (J.H., E.L.D.), Princess Alexandra Hospital, Woolloongabba, Queensland 4102, Australia; The Tumor Bank (L.Z., D.C.), Children's Cancer Research Unit, The Children's Hospital at Westmead, St Westmead, New South Wales 2145, Australia; The Sir Peter MacCallum Department of Oncology (P.J., A.T., R.J.H.), University of Melbourne, Parkville, Victoria 3010, Australia; Department of Endocrinology (E.L.D.), Royal Brisbane and Women's Hospital, Brisbane, Queensland 4029, Australia; Royal Melbourne Hospital and Department of Medicine (A.T.), University of Melbourne, Parkville, Victoria 3010, Australia; and Cancer Diagnosis and Pathology Group (A.J.G.), Kolling Institute of Medical Research and the Department of Anatomical Pathology, Royal North Shore Hospital, Sydney, New South Wales 2065, Australia.

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http://dx.doi.org/10.1210/jc.2015-3889DOI Listing
March 2016

Opinions of Young Adults on Re-Consenting for Biobanking.

J Pediatr 2015 Oct 30;167(4):925-30. Epub 2015 Jul 30.

The Children's Hospital Education Research Institute, The Children's Hospital at Westmead, Westmead, NSW, Australia; The School of Child Health, Discipline of Pediatrics, Faculty of Medicine, University of Sydney, NSW, Australia. Electronic address:

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http://dx.doi.org/10.1016/j.jpeds.2015.07.005DOI Listing
October 2015

Confirmation of childhood acute lymphoblastic leukemia variants, ARID5B and IKZF1, and interaction with parental environmental exposures.

PLoS One 2014 13;9(10):e110255. Epub 2014 Oct 13.

Centre for Bioinformatics, Biomarker Discovery and Information-Based Medicine, Hunter Medical Research Institute, Newcastle, New South Wales, Australia; School of Biomedical Sciences and Pharmacy, University of Newcastle, Newcastle, New South Wales, Australia; Molecular Genetics, Hunter Area Pathology Service, Newcastle, New South Wales, Australia.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0110255PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4195717PMC
September 2015

Identification of lung cancer miRNA-miRNA co-regulation networks through a progressive data refining approach.

J Theor Biol 2015 Sep 28;380:271-9. Epub 2015 May 28.

Advanced Analytics Institute, University of Technology, Sydney, Broadway New South Wales 2007, Sydney, Australia. Electronic address:

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http://dx.doi.org/10.1016/j.jtbi.2015.05.025DOI Listing
September 2015

Wnt pathway in atypical teratoid rhabdoid tumors.

Neuro Oncol 2015 Apr 21;17(4):526-35. Epub 2014 Sep 21.

Barrow Neurological Institute at Phoenix Children's Hospital, Phoenix, Arizona (M.C., C.N.H., V.O., R.D.B.); Children's Hospital at Westmead, Sydney, Australia (L.Z., D.C.); Duke University, Durham, North Carolina (P.C.); Children's Hospital Los Angeles, Los Angeles, California (A.E.-E.); Children's Hospital Los Angeles and the University of Southern California, Los Angeles, California (J.X., A.E.-E.).

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http://dx.doi.org/10.1093/neuonc/nou229DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4483069PMC
April 2015

Case-based retrieval framework for gene expression data.

Cancer Inform 2015 19;14:21-31. Epub 2015 Mar 19.

Center for Quantum Computation and Intelligent Systems, Faculty of Engineering and Information Technology, University of Technology Sydney, Broadway, New South Wales, Australia.

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http://journals.sagepub.com/doi/10.4137/CIN.S22371
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http://dx.doi.org/10.4137/CIN.S22371DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4368049PMC
April 2015

The Tumour Bank of the Children's Hospital at Westmead.

Biopreserv Biobank 2015 Apr;13(2):147-8

The Tumour Bank of The Children's Hospital at Westmead , Westmead, Australia .

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http://dx.doi.org/10.1089/bio.2015.1324DOI Listing
April 2015

Spanning the genomics era: the vital role of a single institution biorepository for childhood cancer research over a decade.

Transl Pediatr 2015 Apr;4(2):93-106

The Tumour Bank, Children's Cancer Research Unit, Kids Research Institute, The Children's Hospital at Westmead, Westmead, NSW, Australia.

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http://dx.doi.org/10.3978/j.issn.2224-4336.2015.04.05DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4729086PMC
April 2015

Clonality and evolutionary history of rhabdomyosarcoma.

PLoS Genet 2015 Mar 13;11(3):e1005075. Epub 2015 Mar 13.

Genetics Branch, Oncogenomics Section, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, Maryland, United States of America; Pediatric Oncology Branch, Center for Cancer Research, National Institutes of Health, Bethesda, Maryland, United States of America.

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http://dx.doi.org/10.1371/journal.pgen.1005075DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4358975PMC
March 2015

Expression of the HOX genes and HOTAIR in atypical teratoid rhabdoid tumors and other pediatric brain tumors.

Cancer Genet 2014 Sep 10;207(9):425-8. Epub 2014 Jun 10.

Barrow Neurological Institute at Phoenix Children's Hospital, Phoenix, AZ. Electronic address:

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http://dx.doi.org/10.1016/j.cancergen.2014.05.014DOI Listing
September 2014

Cellular quantitative analysis of neuroblastoma tumor and splitting overlapping cells.

BMC Bioinformatics 2014 Aug 11;15:272. Epub 2014 Aug 11.

Centre for Quantum Computation and Intelligent Systems (QCIS), Faculty of Engineering and IT, University of Technology, Sydney, PO Box 123, Broadway, NSW 2007 Sydney, Australia.

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http://bmcbioinformatics.biomedcentral.com/articles/10.1186/
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http://dx.doi.org/10.1186/1471-2105-15-272DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4139617PMC
August 2014

Interactive Visualization for Patient-to-Patient Comparison.

Genomics Inform 2014 Mar 31;12(1):21-34. Epub 2014 Mar 31.

The Kids Research Institute, The Children's Hospital at Westmead, Westmead, NSW 2145, Australia.

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http://dx.doi.org/10.5808/GI.2014.12.1.21DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3990763PMC
March 2014

Can Archival Tissue Reveal Answers to Modern Research Questions?: Computer-Aided Histological Assessment of Neuroblastoma Tumours Collected over 60 Years.

Microarrays (Basel) 2014 Feb 28;3(1):72-88. Epub 2014 Feb 28.

Tumour Bank, The Children's Cancer Research Unit, Kid's Research Institute, The Children's Hospital at Westmead, Westmead, NSW 2145, Australia.

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http://dx.doi.org/10.3390/microarrays3010072DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5003456PMC
February 2014

Comprehensive genomic analysis of rhabdomyosarcoma reveals a landscape of alterations affecting a common genetic axis in fusion-positive and fusion-negative tumors.

Cancer Discov 2014 Feb 23;4(2):216-31. Epub 2014 Jan 23.

1Pediatric Oncology Branch, Oncogenomics Section, Center for Cancer Research, NIH; 2Laboratory of Pathology, National Cancer Institute, Bethesda, Maryland; 3Broad Institute of MIT and Harvard, Cambridge; 4Medical Oncology and Center for Cancer Genome Discovery, Dana-Farber Cancer Institute; 5Department of Pathology, Harvard Medical School, Boston, Massachusetts; 6University of Nebraska Medical Center, Omaha, Nebraska; 7Department of Pediatrics, Division of Hematology/Oncology, University of Texas Southwestern Medical Center, Dallas, Texas; and 8Department of Pediatrics, Seattle Children's Hospital, Fred Hutchinson Cancer Research Center, University of Washington, Seattle, Washington; 9The Tumour Bank, The Children's Cancer Research Unit, The Children's Hospital at Westmead, Westmead, New South Wales, Australia; 10Department of Oncology, Hospital Sant Joan de Deu de Barcelona, Barcelona, Spain.

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http://dx.doi.org/10.1158/2159-8290.CD-13-0639DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4462130PMC
February 2014

A balanced iterative random forest for gene selection from microarray data.

BMC Bioinformatics 2013 Aug 27;14:261. Epub 2013 Aug 27.

Centre for Quantum Computation & Intelligent Systems (QCIS), Faculty of Engineering and Information Technology (FEIT), University of Technology, Sydney (UTS), Broadway New South Wales 2007, Australia.

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http://dx.doi.org/10.1186/1471-2105-14-261DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3766035PMC
August 2013

Bilateral Wilms tumor and early presentation in pediatric patients is associated with the truncation of the Wilms tumor 1 protein.

J Pediatr 2013 Jul 10;163(1):224-9. Epub 2013 Feb 10.

Center for Kidney Research, Children's Hospital at Westmead, The University of Sydney, Westmead, NSW, Australia.

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http://dx.doi.org/10.1016/j.jpeds.2012.12.080DOI Listing
July 2013

Non-parametric and integrated framework for segmenting and counting neuroblastic cells within neuroblastoma tumor images.

Med Biol Eng Comput 2013 Jun 29;51(6):645-55. Epub 2013 Jan 29.

Centre for Quantum Computation and Intelligent Systems, Faculty of Engineering and Information Technology, University of Technology, PO Box 123, Broadway, Sydney, NSW 2007, Australia.

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http://link.springer.com/10.1007/s11517-013-1034-9
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http://dx.doi.org/10.1007/s11517-013-1034-9DOI Listing
June 2013

Sequestration of AS-DACA into acidic compartments of the membrane trafficking system as a mechanism of drug resistance in rhabdomyosarcoma.

Int J Mol Sci 2013 Jun 25;14(7):13042-62. Epub 2013 Jun 25.

The Tumour Bank, Children's Cancer Research Unit, the Children's Hospital at Westmead, Westmead, NSW 2145, Australia.

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http://dx.doi.org/10.3390/ijms140713042DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3742173PMC
June 2013

Interactive visualisation with user perspective for biological data analysis.

Stud Health Technol Inform 2011 ;168:125-32

University of Western Sydney, Australia.

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January 2012

Expression profiling reveals MSX1 and EphB2 expression correlates with the invasion capacity of Wilms tumors.

Pediatr Blood Cancer 2011 Dec 8;57(6):950-7. Epub 2011 Mar 8.

Children's Cancer Research Unit, The Children's Hospital at Westmead, Sydney, Australia.

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http://dx.doi.org/10.1002/pbc.23003DOI Listing
December 2011

Intracellular trafficking as a determinant of AS-DACA cytotoxicity in rhabdomyosarcoma cells.

BMC Cell Biol 2011 Aug 24;12:36. Epub 2011 Aug 24.

Biospecimens Research and Tumour Bank, Children's Cancer Research Unit, The Children's Hospital at Westmead, Westmead, NSW 2774, Australia.

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http://dx.doi.org/10.1186/1471-2121-12-36DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3184622PMC
August 2011

Effects of DNA minor groove binding agents on global gene expression.

Cancer Genomics Proteomics 2010 Nov-Dec;7(6):323-30

Department of Pharmacology, Faculty of Medicine, University of Jordan, Amman, Jordan.

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April 2011

Frequent epigenetic inactivation of KIBRA, an upstream member of the Salvador/Warts/Hippo (SWH) tumor suppressor network, is associated with specific genetic event in B-cell acute lymphocytic leukemia.

Epigenetics 2011 Mar 1;6(3):326-32. Epub 2011 Mar 1.

Medical and Molecular Genetics, Institute of Biomedical Research, School of Clinical and Experimental Medicine, College of Medical and Dental Sciences, University of Birmingham, UK.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3092681PMC
http://dx.doi.org/10.4161/epi.6.3.14404DOI Listing
March 2011

The curse of dimensionality: a blessing to personalized medicine.

J Clin Oncol 2010 Dec 1;28(34):e723-4; author reply e725. Epub 2010 Nov 1.

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http://ascopubs.org/doi/10.1200/JCO.2010.30.1986
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http://dx.doi.org/10.1200/JCO.2010.30.1986DOI Listing
December 2010

A genome-wide screen identifies frequently methylated genes in haematological and epithelial cancers.

Mol Cancer 2010 Feb 25;9:44. Epub 2010 Feb 25.

Department of Medical and Molecular Genetics, School of Clinical and Experimental Medicine, College of Medical and Dental Sciences, University of Birmingham, Birmingham B152TT, UK.

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http://molecular-cancer.biomedcentral.com/articles/10.1186/1
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http://dx.doi.org/10.1186/1476-4598-9-44DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2838813PMC
February 2010

Effects of DNA threading bis(9-aminoacridine-4-carboxamides) on global gene expression.

Cancer Genomics Proteomics 2009 Nov-Dec;6(6):317-23

Department of Pharmacology, Faculty of Medicine, University of Jordan, Amman 11942, Jordan.

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January 2010

MINER: exploratory analysis of gene interaction networks by machine learning from expression data.

BMC Genomics 2009 Dec 3;10 Suppl 3:S17. Epub 2009 Dec 3.

School of Computer Science and Engineering, The University of New South Wales, Sydney, NSW, 2052, Australia.

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http://dx.doi.org/10.1186/1471-2164-10-S3-S17DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2788369PMC
December 2009

In vitro assessment of novel transcription inhibitors and topoisomerase poisons in rhabdomyosarcoma cell lines.

Cancer Chemother Pharmacol 2009 Nov 10;64(6):1059-69. Epub 2009 Mar 10.

The Tumour Bank, Oncology Research Unit, The Children's Hospital at Westmead, Locked Bag 4001, Westmead, NSW 2145, Australia.

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http://dx.doi.org/10.1007/s00280-009-0962-4DOI Listing
November 2009

The novel RASSF6 and RASSF10 candidate tumour suppressor genes are frequently epigenetically inactivated in childhood leukaemias.

Mol Cancer 2009 Jul 1;8:42. Epub 2009 Jul 1.

Department of Medical and Molecular Genetics, Institute of Biomedical Research, Medical School, University of Birmingham, Edgbaston, B15 2TT, UK.

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http://dx.doi.org/10.1186/1476-4598-8-42DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2711046PMC
July 2009

Frequent epigenetic inactivation of the SLIT2 gene in chronic and acute lymphocytic leukemia.

Epigenetics 2009 May 1;4(4):265-9. Epub 2009 May 1.

Section of Medical and Molecular Genetics, Institute of Biomedical Research, University of Birmingham, Birmingham B15 2TT, UK.

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http://dx.doi.org/10.4161/epi.9137DOI Listing
May 2009

Epigenetic analysis of childhood acute lymphoblastic leukemia.

Epigenetics 2009 Apr 12;4(3):185-93. Epub 2009 Apr 12.

Institute of Biomedical Research, Medical School, University of Birmingham, Edgbaston, Birmingham, UK.

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http://dx.doi.org/10.4161/epi.4.3.8752DOI Listing
April 2009

Gene expression profiles that segregate patients with childhood acute lymphoblastic leukaemia: an independent validation study identifies that endoglin associates with patient outcome.

Leuk Res 2007 Dec 18;31(12):1741-7. Epub 2007 Jun 18.

The Tumour Bank, The Oncology Research Unit, The Children's Hospital at Westmead, Locked Bag 4001, Westmead, NSW 2145, Australia.

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http://linkinghub.elsevier.com/retrieve/pii/S014521260700164
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http://dx.doi.org/10.1016/j.leukres.2007.04.021DOI Listing
December 2007

High-resolution analysis of chromosomal breakpoints and genomic instability identifies PTPRD as a candidate tumor suppressor gene in neuroblastoma.

Cancer Res 2006 Apr;66(7):3673-80

Children's Cancer Research Institute and Department of Pediatrics, University of Texas Health Science Center at San Antonio, 8403 Floyd Curl Drive, San Antonio, TX 78229-3900, USA.

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http://dx.doi.org/10.1158/0008-5472.CAN-05-4154DOI Listing
April 2006

Inferring a tumor progression model for neuroblastoma from genomic data.

J Clin Oncol 2005 Oct 6;23(29):7322-31. Epub 2005 Sep 6.

Oncogenomics Section, Pediatric Oncology Branch, Advanced Technology Center, National Cancer Institute, Gaithersburg, MD, USA.

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http://ascopubs.org/doi/10.1200/JCO.2005.03.2821
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http://dx.doi.org/10.1200/JCO.2005.03.2821DOI Listing
October 2005

Inter-platform comparability of microarrays in acute lymphoblastic leukemia.

BMC Genomics 2004 Sep 23;5:71. Epub 2004 Sep 23.

Research Center for Genetic Medicine, Children's National Medical Center, Institute of Biomedical Sciences, George Washington University Medical Center, Washington, D.C. 20037, USA.

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http://dx.doi.org/10.1186/1471-2164-5-71DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC522810PMC
September 2004

From correlation to causality: microarrays, cancer, and cancer treatment.

Biotechniques 2003 Mar;Suppl:64-71

Oncology Research Unit, Children's Hospital at Westmead, Westmead, Australia.

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March 2003

Isolation of intact RNA following cryosection of archived frozen tissue.

Biotechniques 2003 Jan;34(1):48-50

Children's Hospital at Westmead, Westmead, NSW, Australia.

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http://dx.doi.org/10.2144/03341bm06DOI Listing
January 2003