Damian Smedley

Damian Smedley

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Damian Smedley

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New models for human disease from the International Mouse Phenotyping Consortium.

Mamm Genome 2019 Jun 24;30(5-6):143-150. Epub 2019 May 24.

William Harvey Research Institute, School of Medicine and Dentistry, Queen Mary University of London, London, UK.

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http://dx.doi.org/10.1007/s00335-019-09804-5DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6606664PMC
June 2019

Erratum: Author Correction: Identification of genes required for eye development by high-throughput screening of mouse knockouts.

Commun Biol 2019 7;2:97. Epub 2019 Mar 7.

27Department of Ophthalmology & Vision Science, School of Medicine, U.C. Davis, Sacramento, CA 95817 USA.

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http://dx.doi.org/10.1038/s42003-019-0349-yDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6405960PMC
March 2019

Expansion of the Human Phenotype Ontology (HPO) knowledge base and resources.

Nucleic Acids Res 2019 Jan;47(D1):D1018-D1027

Monarch Initiative, monarchinitiative.org.

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https://academic.oup.com/nar/advance-article/doi/10.1093/nar
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http://dx.doi.org/10.1093/nar/gky1105DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6324074PMC
January 2019

A Whole-Genome Analysis Framework for Effective Identification of Pathogenic Regulatory Variants in Mendelian Disease.

Am J Hum Genet 2016 09 25;99(3):595-606. Epub 2016 Aug 25.

Institute for Medical and Human Genetics, Charité-Universitätsmedizin Berlin, Augustenburger Platz 1, 13353 Berlin, Germany; Max Planck Institute for Molecular Genetics, Ihnestr. 63-73, 14195 Berlin, Germany; Berlin-Brandenburg Center for Regenerative Therapies (BCRT), Charité-Universitätsmedizin Berlin, Augustenburger Platz 1, 13353 Berlin, Germany; Institute for Bioinformatics, Department of Mathematics and Computer Science, Freie Universität Berlin, Takustrasse, 14195 Berlin, Germany. Electronic address:

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http://dx.doi.org/10.1016/j.ajhg.2016.07.005DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5011059PMC
September 2016

PhenoMiner: from text to a database of phenotypes associated with OMIM diseases.

Database (Oxford) 2015 27;2015. Epub 2015 Oct 27.

The Insight Centre for Data Analytics, National University of Ireland, Galway, Ireland.

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http://dx.doi.org/10.1093/database/bav104DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4622021PMC
August 2016

Generation of silver standard concept annotations from biomedical texts with special relevance to phenotypes.

PLoS One 2015 21;10(1):e0116040. Epub 2015 Jan 21.

School of ITEE, The University of Queensland, St. Lucia, QLD 4072, Australia; Garvan Institute of Medical Research, 384 Victoria Street, Darlinghurst, NSW 2010, Australia.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0116040PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4301805PMC
January 2016

Disease insights through cross-species phenotype comparisons.

Mamm Genome 2015 Oct 20;26(9-10):548-55. Epub 2015 Jun 20.

Skarnes Faculty Group, Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SA, UK.

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http://dx.doi.org/10.1007/s00335-015-9577-8DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4602072PMC
October 2015

Automatic concept recognition using the human phenotype ontology reference and test suite corpora.

Database (Oxford) 2015 27;2015. Epub 2015 Feb 27.

School of ITEE, The University of Queensland, St. Lucia, QLD 4072, Australia, Garvan Institute of Medical Research, Darlinghurst, Sydney, NSW 2010, Australia, Institute for Medical Genetics and Human Genetics, Charité-Universitätsmedizin Berlin, 13353 Berlin, Germany, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridge, UK, National Institute of Informatics, Hitotsubashi, Tokyo, Japan, Mouse Informatics Group, Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton CB10 1SA, UK, LASIGE, Departamento de Informática, Faculdade de Ciências, Universidade de Lisboa, 1749-016 Lisboa, Portugal, Genetic Services of Western Australia, King Edward Memorial Hospital, WA 6008, Australia, School of Paediatrics and Child Health, University of Western Australia, WA 6008, Australia, Institute for Immunology and Infectious Diseases, Murdoch University, WA 6150, Australia, Office of Population Health, Public Health and Clinical Services Division, Western Australian Department of Health, WA 6004, Australia, Academic Department of Medical Genetics, Sydney Children's Hospitals Network (Westmead), NSW 2145, Australia, Discipline of Genetic Medicine, Sydney Medical School, The University of Sydney, NSW 2006, Australia, Max Planck Institute for Molecular Genetics, 14195 Berlin, Germany, Institute for Bioinformatics, Department of Mathematics and Computer Science, Freie Universität Berlin, 14195 Berlin, Germany and Berlin Brandenburg Center for Regenerative Therapies, 13353 Berlin, Germany School of ITEE, The University of Queensland, St. Lucia, QLD 4072, Australia, Garvan Institute of Medical Research, Darlinghurst, Sydney, NSW 2010, Australia, Institute for Medical Genetics and Human Genetics, Charité-Universitätsmedizin Berlin, 13353 Berlin, Germany, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridge, UK, National Institute of Informatics, Hitotsubashi, Tokyo, Japan, Mouse Informa

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http://dx.doi.org/10.1093/database/bav005DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4343077PMC
September 2015

Phenotype-driven strategies for exome prioritization of human Mendelian disease genes.

Genome Med 2015 30;7(1):81. Epub 2015 Jul 30.

Institute for Medical Genetics and Human Genetics, Charité-Universitätsmedizin Berlin, Berlin, Germany ; Max Planck Institute for Molecular Genetics, Ihnestrasse, 14195 Berlin, Germany ; Berlin Brandenburg Center for Regenerative Therapies (BCRT), Charité-Universitätsmedizin Berlin, Augustenburger Platz, 13353 Berlin, Germany ; Institute for Bioinformatics, Department of Mathematics and Computer Science, Freie Universität Berlin, Takustrasse, 14195 Berlin, Germany.

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http://dx.doi.org/10.1186/s13073-015-0199-2DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4520011PMC
August 2015

The BioMart community portal: an innovative alternative to large, centralized data repositories.

Authors:
Damian Smedley Syed Haider Steffen Durinck Luca Pandini Paolo Provero James Allen Olivier Arnaiz Mohammad Hamza Awedh Richard Baldock Giulia Barbiera Philippe Bardou Tim Beck Andrew Blake Merideth Bonierbale Anthony J Brookes Gabriele Bucci Iwan Buetti Sarah Burge Cédric Cabau Joseph W Carlson Claude Chelala Charalambos Chrysostomou Davide Cittaro Olivier Collin Raul Cordova Rosalind J Cutts Erik Dassi Alex Di Genova Anis Djari Anthony Esposito Heather Estrella Eduardo Eyras Julio Fernandez-Banet Simon Forbes Robert C Free Takatomo Fujisawa Emanuela Gadaleta Jose M Garcia-Manteiga David Goodstein Kristian Gray José Afonso Guerra-Assunção Bernard Haggarty Dong-Jin Han Byung Woo Han Todd Harris Jayson Harshbarger Robert K Hastings Richard D Hayes Claire Hoede Shen Hu Zhi-Liang Hu Lucie Hutchins Zhengyan Kan Hideya Kawaji Aminah Keliet Arnaud Kerhornou Sunghoon Kim Rhoda Kinsella Christophe Klopp Lei Kong Daniel Lawson Dejan Lazarevic Ji-Hyun Lee Thomas Letellier Chuan-Yun Li Pietro Lio Chu-Jun Liu Jie Luo Alejandro Maass Jerome Mariette Thomas Maurel Stefania Merella Azza Mostafa Mohamed Francois Moreews Ibounyamine Nabihoudine Nelson Ndegwa Céline Noirot Cristian Perez-Llamas Michael Primig Alessandro Quattrone Hadi Quesneville Davide Rambaldi James Reecy Michela Riba Steven Rosanoff Amna Ali Saddiq Elisa Salas Olivier Sallou Rebecca Shepherd Reinhard Simon Linda Sperling William Spooner Daniel M Staines Delphine Steinbach Kevin Stone Elia Stupka Jon W Teague Abu Z Dayem Ullah Jun Wang Doreen Ware Marie Wong-Erasmus Ken Youens-Clark Amonida Zadissa Shi-Jian Zhang Arek Kasprzyk

Nucleic Acids Res 2015 Jul 20;43(W1):W589-98. Epub 2015 Apr 20.

Center for Translational Genomics and Bioinformatics San Raffaele Scientific Institute, Via Olgettina 58, 20132 Milan, Italy Department of Biological Sciences, Faculty of Science, King Abdulaziz University, Jeddah, Saudi Arabia

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http://dx.doi.org/10.1093/nar/gkv350DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4489294PMC
July 2015

Linking gene expression to phenotypes via pathway information.

J Biomed Semantics 2015 11;6:17. Epub 2015 Apr 11.

Mouse Developmental Genetics, Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, CB1 10SA, Hinxton, UK.

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http://phenoday2014.bio-lark.org/pdf/12.pdf
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http://www.jbiomedsem.com/content/6/1/17
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http://dx.doi.org/10.1186/s13326-015-0013-5DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4404592PMC
April 2015

Walking the interactome for candidate prioritization in exome sequencing studies of Mendelian diseases.

Bioinformatics 2014 Nov 30;30(22):3215-22. Epub 2014 Jul 30.

Mouse Informatics Group, The Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridgeshire CB10 1SA, UK, Institute for Medical Genetics and Human Genetics, Charité-Universitätsmedizin Berlin, Augustenburger Platz 1, 13353 Berlin, Genome Informatics Department, Institute of Human Genetics, University Hospital Essen, University of Duisburg-Essen, Hufelandstr. 55, 45122 Essen, Germany, McKusick-Nathans Institute of Genetic Medicine, John Hopkins University School of Medicine, Baltimore, MD 21205, USA, Department of Mathematics and Computer Science, Institute for Bioinformatics, Freie Universität Berlin, Takustrasse 9, 14195 Berlin, Germany, Institute of Bioorganic Chemistry, Polish Academy of Sciences, 61-701 Poznan, Poland, Berlin-Brandenburg Center for Regenerative Therapies, Charité-Universitätsmedizin Berlin, Augustenburger Platz 1, 13353 Berlin and Max Planck Institute for Molecular Genetics, Ihnestrasse 73, 14195 Berlin, Germany Mouse Informatics Group, The Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridgeshire CB10 1SA, UK, Institute for Medical Genetics and Human Genetics, Charité-Universitätsmedizin Berlin, Augustenburger Platz 1, 13353 Berlin, Genome Informatics Department, Institute of Human Genetics, University Hospital Essen, University of Duisburg-Essen, Hufelandstr. 55, 45122 Essen, Germany, McKusick-Nathans Institute of Genetic Medicine, John Hopkins University School of Medicine, Baltimore, MD 21205, USA, Department of Mathematics and Computer Science, Institute for Bioinformatics, Freie Universität Berlin, Takustrasse 9, 14195 Berlin, Germany, Institute of Bioorganic Chemistry, Polish Academy of Sciences, 61-701 Poznan, Poland, Berlin-Brandenburg Center for Regenerative Therapies, Charité-Universitätsmedizin Berlin, Augustenburger Platz 1, 13353 Berlin and Max Planck Institute for Molecular Genetics, Ihnestrasse 73, 14195 Berlin, Germany Mouse Informatics Group, The Wellcome Trust Sang

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http://bioinformatics.oxfordjournals.org/content/early/2014/
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http://bioinformatics.oxfordjournals.org/cgi/doi/10.1093/bio
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http://dx.doi.org/10.1093/bioinformatics/btu508DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4221119PMC
November 2014

Clinical interpretation of CNVs with cross-species phenotype data.

J Med Genet 2014 Nov 3;51(11):766-772. Epub 2014 Oct 3.

Institute for Medical Genetics and Human Genetics, Charité-Universitätsmedizin Berlin,Berlin, Germany.

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http://dx.doi.org/10.1136/jmedgenet-2014-102633DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4501634PMC
November 2014

Effective diagnosis of genetic disease by computational phenotype analysis of the disease-associated genome.

Sci Transl Med 2014 Sep;6(252):252ra123

Institute for Medical Genetics and Human Genetics, Charité Universitätsmedizin Berlin, Augustenburger Platz 1, 13353 Berlin, Germany. Max Planck Institute for Molecular Genetics, Ihnestr. 63-73, 14195 Berlin, Germany. Berlin-Brandenburg Center for Regenerative Therapies, Charité Universitätsmedizin Berlin, 13353 Berlin, Germany. Institute for Bioinformatics, Department of Mathematics and Computer Science, Freie Universität Berlin, Takustr. 9, 14195 Berlin, Germany.

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http://dx.doi.org/10.1126/scitranslmed.3009262DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4512639PMC
September 2014

Linking tissues to phenotypes using gene expression profiles.

Database (Oxford) 2014 13;2014:bau017. Epub 2014 Mar 13.

Mouse Informatics Group, Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SA, UK.

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https://academic.oup.com/database/article-lookup/doi/10.1093
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http://dx.doi.org/10.1093/database/bau017DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3982582PMC
August 2014

The influence of disease categories on gene candidate predictions from model organism phenotypes.

J Biomed Semantics 2014 3;5(Suppl 1 Proceedings of the Bio-Ontologies Spec Interest G):S4. Epub 2014 Jun 3.

Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, CB10 1SA Hinxton, UK.

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http://dx.doi.org/10.1186/2041-1480-5-S1-S4DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4108905PMC
August 2014

Jannovar: a java library for exome annotation.

Hum Mutat 2014 May 9;35(5):548-55. Epub 2014 Apr 9.

Institute for Medical and Human Genetics, Charité-Universitätsmedizin Berlin, Berlin, Germany; Berlin Brandenburg Center for Regenerative Therapies (BCRT), Charité-Universitätsmedizin Berlin, Berlin, Germany.

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http://dx.doi.org/10.1002/humu.22531DOI Listing
May 2014

Improved exome prioritization of disease genes through cross-species phenotype comparison.

Genome Res 2014 Feb 25;24(2):340-8. Epub 2013 Oct 25.

Institute for Medical and Human Genetics, Charité-Universitätsmedizin Berlin, Augustenburger Platz 1, 13353 Berlin, Germany;

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http://dx.doi.org/10.1101/gr.160325.113DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3912424PMC
February 2014

The International Mouse Phenotyping Consortium Web Portal, a unified point of access for knockout mice and related phenotyping data.

Nucleic Acids Res 2014 Jan 4;42(Database issue):D802-9. Epub 2013 Nov 4.

European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK, Medical Research Council Harwell (Mammalian Genetics Unit and Mary Lyon Centre), Harwell, Oxfordshire OX11 0RD, UK and Mouse Informatics Group, Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA, UK.

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http://dx.doi.org/10.1093/nar/gkt977DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3964955PMC
January 2014

The Human Phenotype Ontology project: linking molecular biology and disease through phenotype data.

Nucleic Acids Res 2014 Jan 11;42(Database issue):D966-74. Epub 2013 Nov 11.

Institute for Medical Genetics and Human Genetics, Charité-Universitätsmedizin Berlin, Augustenburger Platz 1, 13353 Berlin, Germany, Berlin-Brandenburg Center for Regenerative Therapies, Charité-Universitätsmedizin Berlin, Augustenburger Platz 1, 13353 Berlin, Germany, Lawrence Berkeley National Laboratory, Mail Stop 84R0171, Berkeley, CA 94720, USA, The Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridgeshire CB10 1SA, UK, Department of Medical Genetics, Cambridge University Addenbrooke's Hospital, Cambridge CB2 2QQ, UK, Université Paul Sabatier, Faculté de Chirurgie Dentaire, CHU Toulouse, France, Centre for Genomic Medicine, Central Manchester University Hospitals NHS Foundation Trust, Manchester Academic Health Sciences Centre (MAHSC), Manchester, UK, Centre for Genomic Medicine, Institute of Human Development, Faculty of Medical and Human Sciences, University of Manchester, MAHSC, Manchester M13 9WL, UK, Institute of Genetic Medicine. Newcastle University, Central Parkway, Newcastle upon Tyne, NE1 3BZ, UK, Department of Computer Science, University of Toronto, Ontario, Canada, Centre for Computational Medicine, Hospital for Sick Children, Toronto, Ontario, Canada, Department of Clinical Genetics, Leeds Teaching Hospitals NHS Trust, Leeds LS2 9NS, UK, MRC Human Genetics Unit, MRC Institute of Genetic and Molecular Medicine, University of Edinburgh, Edinburgh EH4 2XU, UK, The Jackson Laboratory, Bar Harbor, ME 04609, USA, Center for Molecular and Vascular Biology, University of Leuven, Belgium, Department of Neuropediatrics, University Medical Center Schleswig-Holstein, Kiel Campus, 24105 Kiel, Germany, NE Thames Genetics Service, Great Ormond Street Hospital, London WC1N 3JH, UK, Drexel University College of Medicine, Philadelphia, PA 19102, USA, Department of Haematology, University of Cambridge and NHS Blood and Transplant Cambridge, CB2 0PT Cambridge, UK, Autism and Developmental Medicine Institute, Geisinger Health System

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http://dx.doi.org/10.1093/nar/gkt1026DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3965098PMC
January 2014

PhenoDigm: analyzing curated annotations to associate animal models with human diseases.

Database (Oxford) 2013 9;2013:bat025. Epub 2013 May 9.

Mouse Informatics Group, Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SA, UK.

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http://dx.doi.org/10.1093/database/bat025DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3649640PMC
October 2013

TRACER: a resource to study the regulatory architecture of the mouse genome.

BMC Genomics 2013 Apr 2;14:215. Epub 2013 Apr 2.

European Bioinformatics Institute - European Molecular Biology Laboratory, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK.

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http://dx.doi.org/10.1186/1471-2164-14-215DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3618316PMC
April 2013

Beyond knockouts: cre resources for conditional mutagenesis.

Mamm Genome 2012 Oct 29;23(9-10):587-99. Epub 2012 Aug 29.

The Jackson Laboratory, 600 Main Street, Bar Harbor, ME 04609, USA.

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http://dx.doi.org/10.1007/s00335-012-9430-2DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3655717PMC
October 2012

The mammalian gene function resource: the International Knockout Mouse Consortium.

Mamm Genome 2012 Oct 12;23(9-10):580-6. Epub 2012 Sep 12.

The Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1HH, UK.

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http://dx.doi.org/10.1007/s00335-012-9422-2DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3463800PMC
October 2012

CreZOO--the European virtual repository of Cre and other targeted conditional driver strains.

Database (Oxford) 2012 21;2012:bas029. Epub 2012 Jun 21.

Institute of Immunology, Biomedical Sciences Research Center Alexander Fleming, 34 Fleming Street, 16672 Athens, Greece.

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http://dx.doi.org/10.1093/database/bas029DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3381224PMC
September 2012

MouseFinder: Candidate disease genes from mouse phenotype data.

Hum Mutat 2012 May 16;33(5):858-66. Epub 2012 Mar 16.

Vertebrate Genomics Team, European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, United Kingdom.

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http://doi.wiley.com/10.1002/humu.22051
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http://dx.doi.org/10.1002/humu.22051DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3327758PMC
May 2012

BioMart as an integration solution for the International Knockout Mouse Consortium.

Database (Oxford) 2011 18;2011:bar028. Epub 2011 Sep 18.

The Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1HH.

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http://dx.doi.org/10.1093/database/bar028DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3263594PMC
January 2012

Cre recombinase resources for conditional mouse mutagenesis.

Methods 2011 Apr 31;53(4):411-6. Epub 2010 Dec 31.

European Bioinformatics Institute, Genome Campus, Hinxton, Cambridgeshire CB10 1SA, UK.

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http://dx.doi.org/10.1016/j.ymeth.2010.12.027DOI Listing
April 2011

Research funding. Sustaining the data and bioresource commons.

Science 2010 Oct;330(6004):592-3

Department of Physiology, Development and Neuroscience, University of Cambridge, Cambridge, CB2 3EG, UK.

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http://dx.doi.org/10.1126/science.1191506DOI Listing
October 2010

Mouse Resource Browser--a database of mouse databases.

Database (Oxford) 2010 Jul 6;2010:baq010. Epub 2010 Jul 6.

Institute of Immunology, Biomedical Sciences Research Center Alexander Fleming, 34 Fleming Street, 16672 Athens, Greece.

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http://dx.doi.org/10.1093/database/baq010DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2911845PMC
July 2010

Ensembl variation resources.

BMC Genomics 2010 May 11;11:293. Epub 2010 May 11.

European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK.

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http://dx.doi.org/10.1186/1471-2164-11-293DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2894800PMC
May 2010

Towards the integration of mouse databases - definition and implementation of solutions to two use-cases in mouse functional genomics.

BMC Res Notes 2010 Jan 22;3:16. Epub 2010 Jan 22.

Department of Physiology, Development and Neuroscience, University of Cambridge, Downing Street, Cambridge CB2 3EG, UK.

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http://dx.doi.org/10.1186/1756-0500-3-16DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2826352PMC
January 2010

Models for financial sustainability of biological databases and resources.

Database (Oxford) 2009 23;2009:bap017. Epub 2009 Oct 23.

Institute of Immunology, Biomedical Sciences Research Center Alexander Fleming, 34 Fleming Street, 16672 Athens, Greece, MRC Mary Lyon Centre, Harwell Science and Innovation Campus, Oxfordshire, OX11 0RD, European Bioinformatics Institute, EMBL, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, UK, Experimental Mouse Genetics, Helmholtz Centre for Infection Research & University of Veterinary Medicine, Hannover, Inhoffenstrabe 7, D-38124 Braunschweig, Germany, EMBL-Monterotondo Outstation, Via Ramarini 32, 00015 Monterotondo-Scalo (RM), Italy, Bioinformatics Group, MRC Harwell, Harwell, Oxfordshire, OX11 0RD and Department of Physiology, Development and Neuroscience, University of Cambridge, Downing Street, Cambridge, CB2 3DY, UK.

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http://dx.doi.org/10.1093/database/bap017DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2790311PMC
October 2009

BioMart Central Portal--unified access to biological data.

Nucleic Acids Res 2009 Jul 6;37(Web Server issue):W23-7. Epub 2009 May 6.

EMBL-European Bioinformatics Institute, Hinxton, Cambridge CB10 1SD, Computer Laboratory, University of Cambridge, 15 JJ Thomson Avenue, Cambridge CB3 0FD, UK.

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https://academic.oup.com/nar/article-lookup/doi/10.1093/nar/
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http://dx.doi.org/10.1093/nar/gkp265DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2703988PMC
July 2009

BioMart--biological queries made easy.

BMC Genomics 2009 Jan 14;10:22. Epub 2009 Jan 14.

Ontario Institute for Cancer Research, MaRS Centre, 101 College Street, Toronto, Ontario, Canada.

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http://bmcgenomics.biomedcentral.com/articles/10.1186/1471-2
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http://dx.doi.org/10.1186/1471-2164-10-22DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2649164PMC
January 2009

Solutions for data integration in functional genomics: a critical assessment and case study.

Brief Bioinform 2008 Nov;9(6):532-44

European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, UK.

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https://academic.oup.com/bib/article-lookup/doi/10.1093/bib/
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http://dx.doi.org/10.1093/bib/bbn040DOI Listing
November 2008

New methods for finding disease-susceptibility genes: impact and potential.

Genome Biol 2003 19;4(10):119. Epub 2003 Sep 19.

Oxford Centre for Diabetes, Endocrinology and Metabolism, and Wellcome Trust Centre for Human Genetics, Headington, Oxford 0X3 7LJ, UK.

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http://genomebiology.biomedcentral.com/articles/10.1186/gb-2
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http://dx.doi.org/10.1186/gb-2003-4-10-119DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC328443PMC
August 2004

Application of eVOC: controlled vocabularies for unifying gene expression data.

C R Biol 2003 Oct-Nov;326(10-11):1089-96

South African National Bioinformatics Institute, University of the Western Cape, Bellville, 7535, South Africa.

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May 2004

Variation at the IRF2 gene and susceptibility to psoriasis in chromosome 4q-linked families.

J Invest Dermatol 2004 Mar;122(3):640-3

Division of Medicine & Imperial College Genetics and Genomics Research Institute, Imperial College, London, UK.

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http://dx.doi.org/10.1046/j.0022-202X.2004.22135.xDOI Listing
March 2004