Daisuke Shinmachi

Daisuke Shinmachi

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Daisuke Shinmachi

Daisuke Shinmachi

Publications by authors named "Daisuke Shinmachi"

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MCAW-DB: A glycan profile database capturing the ambiguity of glycan recognition patterns.

Carbohydr Res 2018 Jul 11;464:44-56. Epub 2018 May 11.

Department of Bioinformatics, Graduate School of Engineering, Soka University, Tokyo, 192-8577, Japan; Department of Science and Engineering for Sustainable Innovation, Faculty of Science and Engineering, Soka University, Tokyo, 192-8577, Japan. Electronic address:

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http://dx.doi.org/10.1016/j.carres.2018.05.003DOI Listing
July 2018

Implementation of GlycanBuilder to draw a wide variety of ambiguous glycans.

Carbohydr Res 2017 Jun 19;445:104-116. Epub 2017 Apr 19.

Glycoscience and Glycotechnology Research Group, AIST, Tsukuba, Japan.

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http://dx.doi.org/10.1016/j.carres.2017.04.015DOI Listing
June 2017

GlycoRDF: an ontology to standardize glycomics data in RDF.

Bioinformatics 2015 Mar 11;31(6):919-25. Epub 2014 Nov 11.

Complex Carbohydrate Research Center, University of Georgia, Athens, GA, USA, Research Center for Medical Glycoscience, National Institute of Advanced Industrial Science and Technology, Tsukuba, Japan, Faculty of Engineering, Soka University, Tokyo, Japan, Biomolecular Frontiers Research Centre, Macquarie University, Sydney, Australia, Database Center for Life Science, Research Organization of Information and Systems, Chiba, Japan, Institute of Veterinary Physiology and Biochemistry, Justus-Liebig-University Giessen, Giessen, Germany, Graduate School of Medical and Dental Sciences, Niigata University, Niigata, Japan, N.D. Zelinsky Institute of Organic Chemistry, Russian Academy of Sciences, Moscow, Russia and Laboratory of Glyco-organic Chemistry, The Noguchi Institute, Tokyo, Japan.

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http://dx.doi.org/10.1093/bioinformatics/btu732DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4380026PMC
March 2015

Introducing glycomics data into the Semantic Web.

J Biomed Semantics 2013 Nov 26;4(1):39. Epub 2013 Nov 26.

Research Center for Medical Glycoscience, National Institute of Advanced Industrial Science and Technology, Tsukuba Central-2, Umezono 1-1-1, Tsukuba 305-8568, Japan.

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http://dx.doi.org/10.1186/2041-1480-4-39DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4177142PMC
November 2013

The RINGS resource for glycome informatics analysis and data mining on the Web.

OMICS 2010 Aug;14(4):475-86

Department of Bioinformatics, Faculty of Engineering, Soka University, 1-236 Tangi-cho, Hachioji, Tokyo 192-8577, Japan.

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http://dx.doi.org/10.1089/omi.2009.0129DOI Listing
August 2010