Daisuke Seo

Daisuke Seo

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Daisuke Seo

Daisuke Seo

Publications by authors named "Daisuke Seo"

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Kinetic and structural insight into a role of the re-face Tyr328 residue of the homodimer type ferredoxin-NADP oxidoreductase from Rhodopseudomonas palustris in the reaction with NADP/NADPH.

Biochim Biophys Acta Bioenerg 2019 Dec 12:148140. Epub 2019 Dec 12.

Department of Life Sciences, University of Tokyo, Komaba, Meguro-ku, Tokyo 153-8902, Japan; Institute for Protein Research, Osaka University, Suita, Osaka 565-0871, Japan. Electronic address:

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http://dx.doi.org/10.1016/j.bbabio.2019.148140DOI Listing
December 2019

C-terminal residues of ferredoxin-NAD(P) reductase from Chlorobaculum tepidum are responsible for reaction dynamics in the hydride transfer and redox equilibria with NADP/NADPH.

Photosynth Res 2018 Jun 8;136(3):275-290. Epub 2017 Nov 8.

Division of Functional Genomics, Advanced Science Research Center, Kanazawa University, Takaramachi 13-1, Kanazawa, Ishikawa, 920-0934, Japan.

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http://link.springer.com/10.1007/s11120-017-0462-z
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http://dx.doi.org/10.1007/s11120-017-0462-zDOI Listing
June 2018

Heterologous expression of Halomonas halodenitrificans nitric oxide reductase and its N-terminally truncated NorC subunit in Escherichia coli.

J Inorg Biochem 2017 04 21;169:61-67. Epub 2017 Jan 21.

Division of Material Science, Graduate School of Natural Science and Technology, Kanazawa University, Kakuma, Kanazawa 920-1192, Japan.

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http://dx.doi.org/10.1016/j.jinorgbio.2017.01.006DOI Listing
April 2017

Kinetics of NADP/NADPH reduction-oxidation catalyzed by the ferredoxin-NAD(P) reductase from the green sulfur bacterium Chlorobaculum tepidum.

Photosynth Res 2016 Dec 24;130(1-3):479-489. Epub 2016 Jun 24.

Department of Biological Sciences, Kanagawa University, Tsuchiya, Hiratsuka, Kanagawa, 259-1293, Japan.

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http://dx.doi.org/10.1007/s11120-016-0285-3DOI Listing
December 2016

Pre-steady-state kinetic studies of redox reactions catalysed by Bacillus subtilis ferredoxin-NADP(+) oxidoreductase with NADP(+)/NADPH and ferredoxin.

Biochim Biophys Acta 2016 Jun 8;1857(6):678-87. Epub 2016 Mar 8.

Division of Material Science, Graduate School of Natural Science and Technology, Kanazawa University, Kakuma, Kanazawa, Ishikawa 920-1192, Japan.

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http://dx.doi.org/10.1016/j.bbabio.2016.03.005DOI Listing
June 2016

Replacement of Tyr50 stacked on the si-face of the isoalloxazine ring of the flavin adenine dinucleotide prosthetic group modulates Bacillus subtilis ferredoxin-NADP(+) oxidoreductase activity toward NADPH.

Photosynth Res 2015 Aug 20;125(1-2):321-8. Epub 2015 Feb 20.

Division of Material Science, Graduate School of Natural Science and Technology, Kanazawa University, Kakuma, Kanazawa, Ishikawa, 920-1192, Japan,

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http://dx.doi.org/10.1007/s11120-015-0099-8DOI Listing
August 2015

Role of the C-terminal extension stacked on the re-face of the isoalloxazine ring moiety of the flavin adenine dinucleotide prosthetic group in ferredoxin-NADP(+) oxidoreductase from Bacillus subtilis.

Plant Physiol Biochem 2014 Aug 30;81:143-8. Epub 2014 Jan 30.

Division of Material Science, Graduate School of Natural Science and Technology, Kanazawa University, Kakuma, Kanazawa, Ishikawa 920-1192, Japan.

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http://dx.doi.org/10.1016/j.plaphy.2014.01.011DOI Listing
August 2014

Crystal structure analysis of Bacillus subtilis ferredoxin-NADP(+) oxidoreductase and the structural basis for its substrate selectivity.

Protein Sci 2010 Dec 3;19(12):2279-90. Epub 2010 Nov 3.

Department of Life Science, Graduate School of Life Science, University of Hyogo, Ako-gun, Hyogo 678-1297, Japan.

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http://doi.wiley.com/10.1002/pro.508
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http://dx.doi.org/10.1002/pro.508DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3009396PMC
December 2010

Asymmetric dimeric structure of ferredoxin-NAD(P)+ oxidoreductase from the green sulfur bacterium Chlorobaculum tepidum: implications for binding ferredoxin and NADP+.

J Mol Biol 2010 Aug 18;401(3):403-14. Epub 2010 Jun 18.

Department of Life Sciences, University of Tokyo, Komaba, Meguro-ku, Tokyo 153-8902, Japan.

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http://dx.doi.org/10.1016/j.jmb.2010.06.024DOI Listing
August 2010

Crystallization and preliminary X-ray studies of ferredoxin-NADP+ oxidoreductase encoded by Bacillus subtilis yumC.

Acta Crystallogr Sect F Struct Biol Cryst Commun 2010 Mar 24;66(Pt 3):301-3. Epub 2010 Feb 24.

Department of Life Science, Graduate School of Life Science, University of Hyogo, 3-2-1 Koto, Kamigori-cho, Ako-gun, Hyogo 678-1297, Japan.

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http://scripts.iucr.org/cgi-bin/paper?S1744309110000151
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http://dx.doi.org/10.1107/S1744309110000151DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2833042PMC
March 2010

Studies of interaction of homo-dimeric ferredoxin-NAD(P)+ oxidoreductases of Bacillus subtilis and Rhodopseudomonas palustris, that are closely related to thioredoxin reductases in amino acid sequence, with ferredoxins and pyridine nucleotide coenzymes.

Biochim Biophys Acta 2009 Apr 30;1794(4):594-601. Epub 2008 Dec 30.

Division of Material Sciences, Graduate School of Natural Science and Technology, Kanazawa University, Kakuma, Kanazawa, Ishikawa 920-1192, Japan.

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http://dx.doi.org/10.1016/j.bbapap.2008.12.014DOI Listing
April 2009

Crystallization and preliminary X-ray studies of ferredoxin-NAD(P)+ reductase from Chlorobium tepidum.

Acta Crystallogr Sect F Struct Biol Cryst Commun 2008 Mar 23;64(Pt 3):186-9. Epub 2008 Feb 23.

Department of Life Sciences, University of Tokyo, Komaba, Tokyo 153-8902, Japan.

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http://dx.doi.org/10.1107/S1744309108003667DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2374157PMC
March 2008

Diverse NO reduction by Halomonas halodenitrificans nitric oxide reductase.

Biochem Biophys Res Commun 2005 Jul;333(2):483-7

Division of Material Sciences, Graduate School of Natural Science and Technology, Kanazawa University, Kakuma, Kanazawa 920-1192, Japan.

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http://dx.doi.org/10.1016/j.bbrc.2005.05.149DOI Listing
July 2005

Purification and characterization of ferredoxin-NADP+ reductase encoded by Bacillus subtilis yumC.

Arch Microbiol 2004 Sep 14;182(1):80-9. Epub 2004 Jul 14.

Department of Biology, School of Education, Waseda University, 1-6-1 Nishiwaseda, Shinjuku, 169-8050, Tokyo, Japan.

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http://dx.doi.org/10.1007/s00203-004-0701-5DOI Listing
September 2004

Time-resolved step-scan FTIR investigation on the primary donor of the reaction center from the green sulfur bacterium Chlorobium tepidum.

Photosynth Res 2003 ;75(2):161-9

Service de Bioénergétique, CEA-Saclay, Bât. 532, 91191, Gif-sur-Yvette cedex, France,

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http://dx.doi.org/10.1023/A:1022867317267DOI Listing
January 2003

Purification and characterization of ferredoxin-NAD(P)(+) reductase from the green sulfur bacterium Chlorobium tepidum.

Biochim Biophys Acta 2002 May;1597(1):123-32

Department of Biology, School of Education, Waseda University, 1-6-1 Nishiwaseda, Shinjuku, Tokyo 169-8050, Japan.

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http://dx.doi.org/10.1016/s0167-4838(02)00269-8DOI Listing
May 2002

Kinetics of electron transfer between soluble cytochrome c-554 and purified reaction center complex from the green sulfur bacterium Chlorobium tepidum.

Photosynth Res 2002 ;71(1-2):125-35

Department of Biology, School of Education and Division of Bioscience & Bioengineering, Graduate School of Science and Engineering, Waseda University, Nishiwaseda 1, Shinjuku, Tokyo, 169-8050, Japan,

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http://dx.doi.org/10.1023/A:1014959715666DOI Listing
January 2002