Craig M Shepherd

Craig M Shepherd

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Craig M Shepherd

Craig M Shepherd

Publications by authors named "Craig M Shepherd"

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VIPERdb2: an enhanced and web API enabled relational database for structural virology.

Nucleic Acids Res 2009 Jan 3;37(Database issue):D436-42. Epub 2008 Nov 3.

Department of Molecular Biology, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, CA 92037, USA.

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http://dx.doi.org/10.1093/nar/gkn840DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2686430PMC
January 2009

VIPERdb: a relational database for structural virology.

Nucleic Acids Res 2006 Jan;34(Database issue):D386-9

Department of Molecular Biology, TPC-6 The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, CA 92037, USA.

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http://dx.doi.org/10.1093/nar/gkj032DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1347395PMC
January 2006

Exploring icosahedral virus structures with VIPER.

Nat Rev Microbiol 2005 Oct;3(10):809-17

Department of Molecular Biology, The Scripps Research Institute, La Jolla, California 92037, USA.

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http://www.scripps.edu/lander/pdfs/16205712.pdf
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http://www.nature.com/doifinder/10.1038/nrmicro1283
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http://dx.doi.org/10.1038/nrmicro1283DOI Listing
October 2005

Molecular dynamics simulations of the periplasmic ferric-hydroxamate binding protein FhuD.

Biometals 2005 Aug;18(4):375-86

Structural Biology Research Group, Department of Biological Sciences, University of Calgary, 2500 University Drive N.W, Alberta, Canada T2N 1N4.

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http://dx.doi.org/10.1007/s10534-005-3712-zDOI Listing
August 2005

Extent of protein-protein interactions and quasi-equivalence in viral capsids.

Proteins 2005 Feb;58(2):472-7

Department of Molecular Biology, TPC-06, The Scripps Research Institute, La Jolla, California 92037, USA.

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http://dx.doi.org/10.1002/prot.20311DOI Listing
February 2005

A molecular dynamics study of Ca(2+)-calmodulin: evidence of interdomain coupling and structural collapse on the nanosecond timescale.

Biophys J 2004 Aug;87(2):780-91

Structural Biology Research Group, Department of Biological Sciences, University of Calgary, Calgary, Alberta T2N 1N4, Canada.

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http://dx.doi.org/10.1529/biophysj.103.033266DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1304488PMC
August 2004

Molecular dynamics simulations of peptides from the central domain of smooth muscle caldesmon.

J Biomol Struct Dyn 2004 Feb;21(4):555-66

Department of Biological Sciences, Structural Biology Research Group, University of Calgary, 2500 University Dr NW, Calgary, Canada, T2N 1N4.

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http://dx.doi.org/10.1080/07391102.2004.10506948DOI Listing
February 2004

Interactions of the designed antimicrobial peptide MB21 and truncated dermaseptin S3 with lipid bilayers: molecular-dynamics simulations.

Biochem J 2003 Feb;370(Pt 1):233-43

Department of Biological Sciences, University of Calgary, 2500 University Drive N.W., Calgary, AB, Canada T2N 1N4.

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http://dx.doi.org/10.1042/BJ20021255DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1223151PMC
February 2003