Publications by authors named "Conrad Schoch"

53Publications

GenBank.

Nucleic Acids Res 2020 Nov 16. Epub 2020 Nov 16.

National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Building 38A, 8600 Rockville Pike, Bethesda, MD 20894, USA.

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http://dx.doi.org/10.1093/nar/gkaa1023DOI Listing
November 2020

The NCBI BioCollections Database.

Database (Oxford) 2019 01;2019

National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Center Drive, Bethesda, MD, USA.

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http://dx.doi.org/10.1093/database/baz057DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6487389PMC
January 2019

Using average nucleotide identity to improve taxonomic assignments in prokaryotic genomes at the NCBI.

Int J Syst Evol Microbiol 2018 Jul 24;68(7):2386-2392. Epub 2018 May 24.

National Center of Biotechnology Information, National Institutes of Health, 9600 Rockville Pike, Bethesda, MD, 20892, USA.

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http://dx.doi.org/10.1099/ijsem.0.002809DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6978984PMC
July 2018

The NCBI BioCollections Database.

Database (Oxford) 2018 01;2018

National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, 45 Center Drive, Bethesda, MD 20892, USA.

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https://academic.oup.com/database/article/doi/10.1093/databa
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http://dx.doi.org/10.1093/database/bay006DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5824777PMC
January 2018

Sequence-based classification and identification of Fungi.

Mycologia 2016 Nov/Dec;108(6):1049-1068

l Department of Plant Pathology and Environmental Microbiology, 121 Buckhout Laboratory, Penn State University, University Park, Pennsylvania 16802.

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http://dx.doi.org/10.3852/16-130DOI Listing
January 2018

Scaling up discovery of hidden diversity in fungi: impacts of barcoding approaches.

Philos Trans R Soc Lond B Biol Sci 2016 09;371(1702)

Royal Botanic Gardens Kew, Richmond, Surrey, UK Institute of Biological, Environmental and Rural Sciences, Aberystwyth University, Cledwyn Building, Penglais, Aberystwyth SY23 3DD, UK.

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http://dx.doi.org/10.1098/rstb.2015.0336DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4971188PMC
September 2016

International Society of Human and Animal Mycology (ISHAM)-ITS reference DNA barcoding database--the quality controlled standard tool for routine identification of human and animal pathogenic fungi.

Med Mycol 2015 May 22;53(4):313-37. Epub 2015 Mar 22.

Molecular Mycology Research Laboratory, Centre for Infectious Diseases and Microbiology, Sydney Medical School-Westmead Hospital, Marie Bashir Institute for Infectious Diseases and Bioscurity, University of Sydney, Westmead Millennium Institute, Sydney, Australia

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http://dx.doi.org/10.1093/mmy/myv008DOI Listing
May 2015

An overview of the genus Glyphium and its phylogenetic placement in Patellariales.

Mycologia 2015 May-Jun;107(3):607-18. Epub 2015 Feb 6.

National Center for Biotechnology (NCBI), National Library of Medicine, National Institutes of Health, Bethesda, Maryland 20892

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http://dx.doi.org/10.3852/14-191DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4495917PMC
August 2015

Finding needles in haystacks: linking scientific names, reference specimens and molecular data for Fungi.

Authors:
Conrad L Schoch Barbara Robbertse Vincent Robert Duong Vu Gianluigi Cardinali Laszlo Irinyi Wieland Meyer R Henrik Nilsson Karen Hughes Andrew N Miller Paul M Kirk Kessy Abarenkov M Catherine Aime Hiran A Ariyawansa Martin Bidartondo Teun Boekhout Bart Buyck Qing Cai Jie Chen Ana Crespo Pedro W Crous Ulrike Damm Z Wilhelm De Beer Bryn T M Dentinger Pradeep K Divakar Margarita Dueñas Nicolas Feau Katerina Fliegerova Miguel A García Zai-Wei Ge Gareth W Griffith Johannes Z Groenewald Marizeth Groenewald Martin Grube Marieka Gryzenhout Cécile Gueidan Liangdong Guo Sarah Hambleton Richard Hamelin Karen Hansen Valérie Hofstetter Seung-Beom Hong Jos Houbraken Kevin D Hyde Patrik Inderbitzin Peter R Johnston Samantha C Karunarathna Urmas Kõljalg Gábor M Kovács Ekaphan Kraichak Krisztina Krizsan Cletus P Kurtzman Karl-Henrik Larsson Steven Leavitt Peter M Letcher Kare Liimatainen Jian-Kui Liu D Jean Lodge Janet Jennifer Luangsa-ard H Thorsten Lumbsch Sajeewa S N Maharachchikumbura Dimuthu Manamgoda María P Martín Andrew M Minnis Jean-Marc Moncalvo Giuseppina Mulè Karen K Nakasone Tuula Niskanen Ibai Olariaga Tamás Papp Tamás Petkovits Raquel Pino-Bodas Martha J Powell Huzefa A Raja Dirk Redecker J M Sarmiento-Ramirez Keith A Seifert Bhushan Shrestha Soili Stenroos Benjamin Stielow Sung-Oui Suh Kazuaki Tanaka Leho Tedersoo M Teresa Telleria Dhanushka Udayanga Wendy A Untereiner Javier Diéguez Uribeondo Krishna V Subbarao Csaba Vágvölgyi Cobus Visagie Kerstin Voigt Donald M Walker Bevan S Weir Michael Weiß Nalin N Wijayawardene Michael J Wingfield J P Xu Zhu L Yang Ning Zhang Wen-Ying Zhuang Scott Federhen

Database (Oxford) 2014 30;2014. Epub 2014 Jun 30.

National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, Maryland, USA, CBS-KNAW Fungal Biodiversity Centre, P.O. Box 85167, 3508 AD Utrecht, The Netherlands, Department of Pharmaceutical Sciences - Microbiology, Università degli Studi di Perugia, Perugia, Italy, Molecular Mycology Research Laboratory, Centre for Infectious Diseases and Microbiology, Marie Bashir Institute for Infectious Diseases and Biosecurity, Sydney Medical School-Westmead Hospital, The University of Sydney, Westmead Millennium Institute, Westmead, Australia, Department of Biological and Environmental Sciences, University of Gothenburg, Box 461, 405 30 Göteborg, Sweden, Ecology and Evolutionary Biology, University of Tennessee, Knoxville, TN 37920, USA, Illinois Natural History Survey, University of Illinois, 1816 South Oak Street, Champaign, IL 61820, USA, Mycology Section, Jodrell Laboratory, Royal Botanic Gardens, Kew, Richmond, Surrey, TW9 3DS, UK, Natural History Museum, University of Tartu, 46 Vanemuise, 51014 Tartu, Estonia, Purdue University, Department of Botany and Plant Pathology, 915 W. State Street, West Lafayette, IN 47907, USA, Institute of Excellence in Fungal Research, and School of Science, Mae Fah Luang University, Chiang Rai 57100, Thailand, Imperial College London, Royal Botanic Gardens, Kew TW9 3DS, England, UK, Muséum National d'Histoire Naturelle, Dépt. Systématique et Evolution CP39, UMR7205, 12 Rue Buffon, F-75005 Paris, France, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming 650201, Yunnan, P. R. China, Departamento de Biología Vegetal II, Facultad de Farmacia, Universidad Complutense de Madrid, Madrid 28040, Spain, Senckenberg Museum of Natural History Görlitz, PF 300 154, 02806 Görlitz, Germany, Department of Microbiology and Plant Pathology, Forestry Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria 0001, South Africa, Real Jardín Botánico, RJB-CSIC,

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http://dx.doi.org/10.1093/database/bau061DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4075928PMC
February 2015

Filling gaps in biodiversity knowledge for macrofungi: contributions and assessment of an herbarium collection DNA barcode sequencing project.

PLoS One 2013 30;8(4):e62419. Epub 2013 Apr 30.

Forest Pathology and Mycology Laboratory, Department of Environmental Science, Policy and Management, University of California, Berkeley, California, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0062419PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3640088PMC
November 2013

Pleosporales.

Fungal Divers 2012 Mar 9;53(1):1-221. Epub 2011 Oct 9.

Division of Microbiology, School of Biological Sciences, The University of Hong Kong, Pokfulam Road, Hong Kong, SAR, People's Republic of China.

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http://dx.doi.org/10.1007/s13225-011-0117-xDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3477819PMC
March 2012

Capnodiaceae.

Fungal Divers 2011 Dec 16;51(1):103-134. Epub 2011 Nov 16.

Institute of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand.

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http://link.springer.com/10.1007/s13225-011-0145-6
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http://dx.doi.org/10.1007/s13225-011-0145-6DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3377173PMC
December 2011

Nuclear ribosomal internal transcribed spacer (ITS) region as a universal DNA barcode marker for Fungi.

Proc Natl Acad Sci U S A 2012 Apr 27;109(16):6241-6. Epub 2012 Mar 27.

National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD 20892, USA.

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http://dx.doi.org/10.1073/pnas.1117018109DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3341068PMC
April 2012

Phylogenetic placement of the ectomycorrhizal genus Cenococcum in Gloniaceae (Dothideomycetes).

Mycologia 2012 May-Jun;104(3):758-65. Epub 2012 Mar 27.

Department of Botany and Plant Pathology, Oregon State University, Corvallis, OR97330, USA.

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http://dx.doi.org/10.3852/11-233DOI Listing
January 2013

A reappraisal of Microthyriaceae.

Fungal Divers 2011 Dec;51(1):189-248

International Fungal Research and Development Centre, Key Laboratory of Resource Insect Cultivation & Utilization State Forestry Administration, The Research Institute of Resource Insects, Chinese Academy of Forestry, Kunming 650224, People's Republic of China.

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http://dx.doi.org/10.1007/s13225-011-0143-8DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3293405PMC
December 2011

A molecular, morphological and ecological re-appraisal of Venturiales-a new order of Dothideomycetes.

Fungal Divers 2011 Nov;51(1):249-277

Mushroom Research Foundation, 128 Moo3, Bahn Pa Dheng, T. Pa Pae, A. Mae Taeng Chiang Mai, 50150, Thailand. Institute of Excellence in Fungal Research, School of Science, Mae Fah Luang University, Tasud, Muang, Chiang Rai 57100, Thailand.

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http://dx.doi.org/10.1007/s13225-011-0141-xDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3285419PMC
November 2011

Dolabra nepheliae on rambutan and lychee represents a novel lineage of phytopathogenic Eurotiomycetes.

Mycoscience 2010 Jul;51(4):300-309

Systematic Mycology and Microbiology Laboratory, USDA Agricultural Research Service, Beltsville, MD 20705, USA.

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http://dx.doi.org/10.1007/s10267-010-0042-yDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2929132PMC
July 2010

On the evolution of the Hysteriaceae and Mytilinidiaceae (Pleosporomycetidae, Dothideomycetes, Ascomycota) using four nuclear genes.

Mycol Res 2009 Apr;113(Pt 4):461-79

Department of Biological Sciences, Kean University, 1000 Morris Ave., Union, New Jersey 07083, USA.

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https://linkinghub.elsevier.com/retrieve/pii/S09537562090000
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http://dx.doi.org/10.1016/j.mycres.2008.12.001DOI Listing
April 2009

Homologs of ToxB, a host-selective toxin gene from Pyrenophora tritici-repentis, are present in the genome of sister-species Pyrenophora bromi and other members of the Ascomycota.

Fungal Genet Biol 2008 Mar 30;45(3):363-77. Epub 2007 Oct 30.

Department of Botany and Plant Pathology, Oregon State University, Corvallis, OR 97331, USA.

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http://dx.doi.org/10.1016/j.fgb.2007.10.014DOI Listing
March 2008

Detection and identification of fungi intimately associated with the brown seaweed Fucus serratus.

Appl Environ Microbiol 2008 Feb 14;74(4):931-41. Epub 2007 Dec 14.

Institute of Phytopathology and Applied Zoology, University of Giessen, D-35392 Giessen, Germany.

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http://dx.doi.org/10.1128/AEM.01158-07DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2258598PMC
February 2008

Eurotiomycetes: Eurotiomycetidae and Chaetothyriomycetidae.

Mycologia 2006 Nov-Dec;98(6):1053-64

Department of Plant Pathology, Pennsylvania State University, University Park 16802, USA.

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http://dx.doi.org/10.3852/mycologia.98.6.1053DOI Listing
October 2007

A multigene phylogeny of the Dothideomycetes using four nuclear loci.

Mycologia 2006 Nov-Dec;98(6):1041-52

Department of Botany and Plant Pathology, Oregon State University, Corvallis 93133, USA.

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http://dx.doi.org/10.3852/mycologia.98.6.1041DOI Listing
October 2007

Marine fungal lineages in the Hypocreomycetidae.

Mycol Res 2007 Feb 11;111(Pt 2):154-62. Epub 2006 Dec 11.

Department of Botany and Plant Pathology, Oregon State University, Corvallis, OR 97331, USA.

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http://dx.doi.org/10.1016/j.mycres.2006.10.005DOI Listing
February 2007

Evolution of helotialean fungi (Leotiomycetes, Pezizomycotina): a nuclear rDNA phylogeny.

Mol Phylogenet Evol 2006 Nov 3;41(2):295-312. Epub 2006 Jun 3.

Department of Biology, Clark University, 950 Main Street, Worcester, MA 01610, USA.

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http://dx.doi.org/10.1016/j.ympev.2006.05.031DOI Listing
November 2006

A phylogenomic analysis of the Ascomycota.

Fungal Genet Biol 2006 Oct 15;43(10):715-25. Epub 2006 Jun 15.

Department of Botany and Plant Pathology, Oregon State University, Corvallis, 97333, USA.

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http://dx.doi.org/10.1016/j.fgb.2006.05.001DOI Listing
October 2006

The halotolerant fungus Glomerobolus gelineus is a member of the Ostropales.

Mycol Res 2006 Mar 20;110(Pt 3):257-63. Epub 2006 Jan 20.

Department of Botany and Plant Pathology, University of Oregon State, Corvallis, 97333, USA.

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http://dx.doi.org/10.1016/j.mycres.2005.10.001DOI Listing
March 2006

A complete inventory of fungal kinesins in representative filamentous ascomycetes.

Fungal Genet Biol 2003 Jun;39(1):1-15

Department of Plant Pathology, 334 Plant Science Building, Cornell University, Ithaca, NY 14853, USA.

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http://dx.doi.org/10.1016/s1087-1845(03)00022-7DOI Listing
June 2003

Female Fertility and Single Nucleotide Polymorphism Comparisons in Cylindrocladium pauciramosum.

Plant Dis 2001 Sep;85(9):941-946

University of California Cooperative Extension 1432, Salinas 93901.

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http://dx.doi.org/10.1094/PDIS.2001.85.9.941DOI Listing
September 2001