Colin Logie

Colin Logie

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Colin Logie

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Publisher Correction: Epigenetic modulation of a hardwired 3D chromatin landscape in two naive states of pluripotency.

Nat Cell Biol 2019 Jul;21(7):911-912

Department of Molecular Biology, Faculty of Science, Radboud University, Radboud Institute for Molecular Life Sciences, Nijmegen, the Netherlands.

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http://dx.doi.org/10.1038/s41556-019-0341-2DOI Listing
July 2019

Epigenetic modulation of a hardwired 3D chromatin landscape in two naive states of pluripotency.

Nat Cell Biol 2019 05 29;21(5):568-578. Epub 2019 Apr 29.

Department of Molecular Biology, Faculty of Science, Radboud University, Radboud Institute for Molecular Life Sciences, Nijmegen, the Netherlands.

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http://www.nature.com/articles/s41556-019-0310-9
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http://dx.doi.org/10.1038/s41556-019-0310-9DOI Listing
May 2019

Underreported and unknown student harassment at the Faculty of Science.

PLoS One 2019 25;14(4):e0215067. Epub 2019 Apr 25.

Gender and Diversity Committee of the Faculty of Science of the Radboud University, Nijmegen, The Netherlands.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0215067PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6483172PMC
April 2019

Extensive epigenomic integration of the glucocorticoid response in primary human monocytes and in vitro derived macrophages.

Sci Rep 2019 Feb 26;9(1):2772. Epub 2019 Feb 26.

Department of Molecular Biology, Radboud Institute for Molecular Life Sciences, Faculty of Science Radboud University, PO box 9101, 6500 HG, Nijmegen, The Netherlands.

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http://dx.doi.org/10.1038/s41598-019-39395-9DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6391480PMC
February 2019

Mutant p63 Affects Epidermal Cell Identity through Rewiring the Enhancer Landscape.

Cell Rep 2018 12;25(12):3490-3503.e4

Department of Molecular Developmental Biology, Faculty of Science, Radboud Institute for Molecular Life Sciences, Radboud University, Nijmegen, the Netherlands; Department of Human Genetics, Radboud University Medical Center, Nijmegen, the Netherlands. Electronic address:

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https://linkinghub.elsevier.com/retrieve/pii/S22111247183180
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http://dx.doi.org/10.1016/j.celrep.2018.11.039DOI Listing
December 2018

Dendritic Cells Actively Limit Interleukin-10 Production Under Inflammatory Conditions DC-SCRIPT and Dual-Specificity Phosphatase 4.

Front Immunol 2018 22;9:1420. Epub 2018 Jun 22.

Radiotherapy & OncoImmunology Laboratory, Department of Radiation Oncology, Radboud Institute for Molecular Life Sciences, Radboud University Medical Center, Nijmegen, Netherlands.

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http://dx.doi.org/10.3389/fimmu.2018.01420DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6023963PMC
June 2018

HDAC11 is a regulator of diverse immune functions.

Biochim Biophys Acta Gene Regul Mech 2018 Jan 6;1861(1):54-59. Epub 2017 Dec 6.

Department of Molecular Biology, Radboud Institute for Molecular Life Sciences, Nijmegen, The Netherlands. Electronic address:

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http://dx.doi.org/10.1016/j.bbagrm.2017.12.002DOI Listing
January 2018

Cellular reprogramming for clinical cartilage repair.

Cell Biol Toxicol 2017 08 31;33(4):329-349. Epub 2017 Jan 31.

Department of Orthopaedics, University Medical Center Utrecht, Utrecht, The Netherlands.

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http://dx.doi.org/10.1007/s10565-017-9382-0DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5493710PMC
August 2017

We Can Still Be Friends: IFN-γ Breaks Up Macrophage Enhancers.

Immunity 2017 08;47(2):209-211

Department of Molecular Biology, Radboud Institute of Molecular Life Sciences and Faculty of Science, Radboud University, 6525 GA Nijmegen, the Netherlands. Electronic address:

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http://dx.doi.org/10.1016/j.immuni.2017.08.002DOI Listing
August 2017

Epigenetic memory: A macrophage perspective.

Semin Immunol 2016 08;28(4):359-67

Department of Molecular Biology, Faculties of Science and Medicine, Nijmegen Centre for Molecular Life Sciences, Radboud University, 6500 HB Nijmegen, The Netherlands; NCMLS, FNWI, Radboud University Nijmegen, The Netherlands.

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http://dx.doi.org/10.1016/j.smim.2016.06.003DOI Listing
August 2016

Chromatin accessibility, p300, and histone acetylation define PML-RARα and AML1-ETO binding sites in acute myeloid leukemia.

Blood 2012 Oct 24;120(15):3058-68. Epub 2012 Aug 24.

Radboud University, Department of Molecular Biology, Faculty of Science, Nijmegen Centre for Molecular Life Sciences, Nijmegen, The Netherlands.

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http://dx.doi.org/10.1182/blood-2011-10-386086DOI Listing
October 2012

Sequence-based prediction of single nucleosome positioning and genome-wide nucleosome occupancy.

Proc Natl Acad Sci U S A 2012 Sep 20;109(38):E2514-22. Epub 2012 Aug 20.

Physics of Life Processes, Leiden University, Leiden, The Netherlands.

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http://dx.doi.org/10.1073/pnas.1205659109DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3458375PMC
September 2012

SS18 together with animal-specific factors defines human BAF-type SWI/SNF complexes.

PLoS One 2012 19;7(3):e33834. Epub 2012 Mar 19.

Department of Molecular Biology, Nijmegen Centre for Molecular Life Sciences, Radboud University, Nijmegen, The Netherlands.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0033834PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3307773PMC
July 2012

Death receptor pathway activation and increase of ROS production by the triple epigenetic inhibitor UVI5008.

Mol Cancer Ther 2011 Dec 6;10(12):2394-404. Epub 2011 Oct 6.

Dipartimento di Patologia Generale, Seconda Università degli Studi di Napoli, Vico L. De Crecchio 7, 80138 Napoli, Italy.

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http://dx.doi.org/10.1158/1535-7163.MCT-11-0525DOI Listing
December 2011

The human histone H3 complement anno 2011.

Biochim Biophys Acta 2011 Oct 14;1809(10):577-86. Epub 2011 Jul 14.

Department of Molecular Biology, Nijmegen Centre for Molecular Life Sciences, Radboud University, The Netherlands.

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http://dx.doi.org/10.1016/j.bbagrm.2011.07.002DOI Listing
October 2011

The decade of the epigenomes?

Genes Cancer 2011 Jun;2(6):680-7

Department of Molecular Biology, Faculty of Science, Nijmegen Centre for Molecular Life Sciences, Radboud University, Nijmegen, the Netherlands.

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http://gan.sagepub.com/lookup/doi/10.1177/1947601911417860
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http://dx.doi.org/10.1177/1947601911417860DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3174262PMC
June 2011

Histone H3 serine 57 and lysine 56 interplay in transcription elongation and recovery from S-phase stress.

PLoS One 2010 May 26;5(5):e10851. Epub 2010 May 26.

Department of Molecular Biology, Nijmegen Centre for Molecular Life Sciences, Radboud University Nijmegen, The Netherlands.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0010851PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2877106PMC
May 2010

Single-molecule force spectroscopy reveals a highly compliant helical folding for the 30-nm chromatin fiber.

Nat Struct Mol Biol 2009 May 19;16(5):534-40. Epub 2009 Apr 19.

Leiden University, The Netherlands.

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http://dx.doi.org/10.1038/nsmb.1590DOI Listing
May 2009

Recruitment of a chromatin remodelling complex by the Hog1 MAP kinase to stress genes.

EMBO J 2009 Feb 15;28(4):326-36. Epub 2009 Jan 15.

Cell Signaling Unit, Departament de Ciències Experimentals i de la Salut, Universitat Pompeu Fabra, Parc de Recerca Biomèdica de Barcelona, Barcelona, Spain.

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http://dx.doi.org/10.1038/emboj.2008.299DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2632941PMC
February 2009

Identification of potentially hazardous human gene products in GMO risk assessment.

Environ Biosafety Res 2008 Jan-Mar;7(1):1-9. Epub 2008 Apr 3.

GMO Office, National Institute for Public Health and the Environment, Bilthoven, The Netherlands.

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http://eagri.cz/public/web/file/100594/GMO_risk_assessment.p
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http://www.ebr-journal.org/10.1051/ebr:2008001
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http://dx.doi.org/10.1051/ebr:2008001DOI Listing
September 2008

dCHD3, a novel ATP-dependent chromatin remodeler associated with sites of active transcription.

Mol Cell Biol 2008 Apr 4;28(8):2745-57. Epub 2008 Feb 4.

Institut für Molekularbiologie und Tumorforschung, University of Marburg, 35033 Marburg, Germany.

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http://dx.doi.org/10.1128/MCB.01839-07DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2293103PMC
April 2008

The new frontier in cancer research: deciphering cancer epigenetics.

Int J Biochem Cell Biol 2007 21;39(7-8):1450-61. Epub 2007 Mar 21.

Molecular Biology Department, Nijmegen Centre for Molecular Life Sciences, Radboud University, The Netherlands.

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http://dx.doi.org/10.1016/j.biocel.2007.03.011DOI Listing
October 2007

Reverse genetic analysis of the yeast RSC chromatin remodeler reveals a role for RSC3 and SNF5 homolog 1 in ploidy maintenance.

PLoS Genet 2007 Jun 20;3(6):e92. Epub 2007 Apr 20.

Molecular Biology Department, Nijmegen Centre for Molecular Life Sciences, Radboud University Nijmegen, Netherlands.

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http://dx.doi.org/10.1371/journal.pgen.0030092DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1885278PMC
June 2007

The ins and outs of ATP-dependent chromatin remodeling in budding yeast: biophysical and proteomic perspectives.

Biochim Biophys Acta 2007 Mar 9;1769(3):153-71. Epub 2007 Feb 9.

Department of Molecular Biology, NCMLS, Radboud University, P.O. Box 9101, 6500 HB Nijmegen, The Netherlands.

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http://dx.doi.org/10.1016/j.bbaexp.2007.01.013DOI Listing
March 2007

Histone H3 lysine 56 acetylation: a new twist in the chromosome cycle.

Cell Cycle 2006 Nov 15;5(22):2602-8. Epub 2006 Nov 15.

Department of Molecular Biology, Nijmegen Center for Molecular Life Sciences, Radboud University, The Netherlands.

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http://dx.doi.org/10.4161/cc.5.22.3473DOI Listing
November 2006

Characterization of lysine 56 of histone H3 as an acetylation site in Saccharomyces cerevisiae.

J Biol Chem 2005 Jul 10;280(28):25949-52. Epub 2005 May 10.

Department of Molecular Biology, Nijmegen Center for Molecular Life Sciences, Radboud University, 6500 HB Nijmegen, The Netherlands.

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http://dx.doi.org/10.1074/jbc.C500181200DOI Listing
July 2005

Phosphorylation of linker histones regulates ATP-dependent chromatin remodeling enzymes.

Nat Struct Biol 2002 Apr;9(4):263-7

Program in Molecular Medicine, University of Massachusetts Medical School, Worcester, Massachusetts 01605, USA.

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http://dx.doi.org/10.1038/nsb776DOI Listing
April 2002