Clemens Wrzodek

Clemens Wrzodek

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Clemens Wrzodek

Clemens Wrzodek

Publications by authors named "Clemens Wrzodek"

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20Publications

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ZBIT Bioinformatics Toolbox: A Web-Platform for Systems Biology and Expression Data Analysis.

PLoS One 2016 16;11(2):e0149263. Epub 2016 Feb 16.

Department of Computer Science, University of Tübingen, Tübingen, Germany.

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July 2016

Evaluation of toxicogenomics approaches for assessing the risk of nongenotoxic carcinogenicity in rat liver.

PLoS One 2014 14;9(5):e97678. Epub 2014 May 14.

Center for Bioinformatics Tuebingen (ZBIT), University of Tuebingen, Tübingen, Germany.

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June 2015

TFpredict and SABINE: sequence-based prediction of structural and functional characteristics of transcription factors.

PLoS One 2013 12;8(12):e82238. Epub 2013 Dec 12.

Center of Bioinformatics Tuebingen (ZBIT), University of Tuebingen, Tübingen, Germany.

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October 2014

Ha-ras and β-catenin oncoproteins orchestrate metabolic programs in mouse liver tumors.

Int J Cancer 2014 Oct 3;135(7):1574-85. Epub 2014 Mar 3.

Institute of Experimental and Clinical Pharmacology and Toxicology Department of Toxicology, Eberhard Karls University of Tübingen, Tübingen, 72074, Germany.

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October 2014

Integrated enrichment analysis and pathway-centered visualization of metabolomics, proteomics, transcriptomics, and genomics data by using the InCroMAP software.

J Chromatogr B Analyt Technol Biomed Life Sci 2014 Sep 25;966:77-82. Epub 2014 Apr 25.

Institute for Diabetes Research and Metabolic Diseases of the Helmholtz Centre Munich at the University of Tübingen, Tübingen, Germany; Division of Clinical Chemistry and Pathobiochemistry, Department of Internal Medicine IV, University Hospital Tübingen, Tübingen, Germany; German Center for Diabetes Research (DZD), Germany. Electronic address:

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September 2014

Integrative pathway-based approach for genome-wide association studies: identification of new pathways for rheumatoid arthritis and type 1 diabetes.

PLoS One 2013 25;8(10):e78577. Epub 2013 Oct 25.

Center for Bioinformatics Tuebingen (ZBIT), University of Tuebingen, Tübingen, Germany.

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August 2014

A toxicogenomic approach for the prediction of murine hepatocarcinogenesis using ensemble feature selection.

PLoS One 2013 10;8(9):e73938. Epub 2013 Sep 10.

Center for Bioinformatics Tuebingen (ZBIT), University of Tuebingen, Tübingen, Germany.

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June 2014

Parkinson's disease: dopaminergic nerve cell model is consistent with experimental finding of increased extracellular transport of α-synuclein.

BMC Neurosci 2013 Nov 6;14:136. Epub 2013 Nov 6.

Center for Bioinformatics Tuebingen (ZBIT), University of Tuebingen, 72076 Tübingen, Germany.

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November 2013

InCroMAP: integrated analysis of cross-platform microarray and pathway data.

Bioinformatics 2013 Feb 20;29(4):506-8. Epub 2012 Dec 20.

Center for Bioinformatics Tuebingen (ZBIT), University of Tuebingen, 72076 Tübingen, Germany.

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February 2013

Precise generation of systems biology models from KEGG pathways.

BMC Syst Biol 2013 Feb 21;7:15. Epub 2013 Feb 21.

Center for Bioinformatics Tuebingen (ZBIT), University of Tuebingen, Tübingen, Germany.

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February 2013

Pathway-based visualization of cross-platform microarray datasets.

Bioinformatics 2012 Dec 9;28(23):3021-6. Epub 2012 Oct 9.

Center for Bioinformatics Tuebingen (ZBIT), University of Tuebingen, 72076 Tübingen, Germany.

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December 2012

Qualitative translation of relations from BioPAX to SBML qual.

Bioinformatics 2012 Oct 24;28(20):2648-53. Epub 2012 Aug 24.

Center for Bioinformatics Tuebingen (ZBIT), University of Tuebingen, 72076 Tübingen, Germany.

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October 2012

Linking the epigenome to the genome: correlation of different features to DNA methylation of CpG islands.

PLoS One 2012 30;7(4):e35327. Epub 2012 Apr 30.

Center for Bioinformatics Tübingen, ZBIT, University of Tübingen, Tübingen, Germany.

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September 2012

Inferring statin-induced gene regulatory relationships in primary human hepatocytes.

Bioinformatics 2011 Sep 14;27(18):2473-7. Epub 2011 Jul 14.

Center for Bioinformatics Tuebingen, University of Tuebingen, Tuebingen, Germany.

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September 2011

JSBML: a flexible Java library for working with SBML.

Bioinformatics 2011 Aug 22;27(15):2167-8. Epub 2011 Jun 22.

Center for Bioinformatics Tuebingen (ZBIT), University of Tuebingen, Tübingen, Germany.

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August 2011

KEGGtranslator: visualizing and converting the KEGG PATHWAY database to various formats.

Bioinformatics 2011 Aug 23;27(16):2314-5. Epub 2011 Jun 23.

Center for Bioinformatics Tuebingen, University of Tuebingen, 72076 Tübingen, Germany.

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August 2011

ModuleMaster: a new tool to decipher transcriptional regulatory networks.

Biosystems 2010 Jan 9;99(1):79-81. Epub 2009 Oct 9.

Center for Bioinformatics Tübingen (ZBIT), University of Tübingen, Sand 1, 72076 Tübingen, Germany.

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January 2010