Chung-Jui Tsai

Chung-Jui Tsai

UNVERIFIED PROFILE

Are you Chung-Jui Tsai?   Register this Author

Register author
Chung-Jui Tsai

Chung-Jui Tsai

Publications by authors named "Chung-Jui Tsai"

Are you Chung-Jui Tsai?   Register this Author

54Publications

812Reads

33Profile Views

Salicylic acid activates poplar defense against the biotrophic rust fungus Melampsora larici-populina via increased biosynthesis of catechin and proanthocyanidins.

New Phytol 2019 01 31;221(2):960-975. Epub 2018 Aug 31.

Department of Zoology and Entomology, Forestry and Agricultural Biotechnology Institute, University of Pretoria, Private Bag X20, Pretoria, 0028, South Africa.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1111/nph.15396DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6585937PMC
January 2019

Genome Editing in Trees: From Multiple Repair Pathways to Long-Term Stability.

Front Plant Sci 2018 23;9:1732. Epub 2018 Nov 23.

Warnell School of Forestry and Natural Resources, Department of Genetics, and Department of Plant Biology, University of Georgia, Athens, GA, United States.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.3389/fpls.2018.01732DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6265510PMC
November 2018

Host-plant induced changes in microbial community structure and midgut gene expression in an invasive polyphage (Anoplophora glabripennis).

Sci Rep 2018 06 25;8(1):9620. Epub 2018 Jun 25.

Department of Entomology and Center for Chemical Ecology, The Pennsylvania State University, University Park, PA, 16802, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1038/s41598-018-27476-0DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6018227PMC
June 2018

Tubulins, rhythms and cell walls in poplar leaves: it's all in the timing.

Tree Physiol 2018 03;38(3):397-408

Warnell School of Forestry and Natural Resources, University of Georgia, Athens, GA 30602, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/treephys/tpx104DOI Listing
March 2018

Branching out: a new era of investigating physiological processes in forest trees using genomic tools.

Tree Physiol 2018 03;38(3):303-310

Department of Biological Sciences, University of Alberta, Edmonton, AB, Canada T6G 2E9.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/treephys/tpy026DOI Listing
March 2018

Leaf miner-induced morphological, physiological and molecular changes in mangrove plant Avicennia marina (Forsk.) Vierh.

Tree Physiol 2017 01;37(1):82-97

Key Laboratory of the Ministry of Education for Coastal and Wetland Ecosystems, College of the Environment and Ecology, Xiamen University, Xiamen, Fujian, P.R. China.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/treephys/tpw097DOI Listing
January 2017

CRISPRing into the woods.

GM Crops Food 2015 11;6(4):206-15. Epub 2015 Sep 11.

a Warnell School of Forestry and Natural Resources, and Department of Genetics; University of Georgia ; Athens , GA USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1080/21645698.2015.1091553DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5033219PMC
November 2016

Tubulin C-terminal Post-translational Modifications Do Not Occur in Wood Forming Tissue of .

Front Plant Sci 2016 13;7:1493. Epub 2016 Oct 13.

Daniel B. Warnell School of Forestry and Natural Resources, University of GeorgiaAthens, GA, USA; Department of Genetics, University of GeorgiaAthens, GA, USA; Institute of Bioinformatics, University of GeorgiaAthens, GA, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.3389/fpls.2016.01493DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5061773PMC
October 2016

Drought response transcriptomes are altered in poplar with reduced tonoplast sucrose transporter expression.

Sci Rep 2016 09 19;6:33655. Epub 2016 Sep 19.

Warnell School of Forestry and Natural Resources and Department of Genetics, University of Georgia, Athens, GA 30602, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1038/srep33655DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5027551PMC
September 2016

Evolutionary Divergences in Root Exudate Composition among Ecologically-Contrasting Helianthus Species.

PLoS One 2016 29;11(1):e0148280. Epub 2016 Jan 29.

Department of Plant Biology, University of Georgia, Athens, Georgia, United States of America.

View Article

Download full-text PDF

Source
http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0148280PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4733055PMC
July 2016

Macroevolution of leaf defenses and secondary metabolites across the genus Helianthus.

New Phytol 2016 Mar 19;209(4):1720-33. Epub 2015 Nov 19.

Department of Plant Biology, University of Georgia, Athens, GA, 30602, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1111/nph.13749DOI Listing
March 2016

Exploiting SNPs for biallelic CRISPR mutations in the outcrossing woody perennial Populus reveals 4-coumarate:CoA ligase specificity and redundancy.

New Phytol 2015 Oct 13;208(2):298-301. Epub 2015 May 13.

School of Forestry and Natural Resources, University of Georgia, Athens, GA, 30602, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1111/nph.13470DOI Listing
October 2015

Tubulin perturbation leads to unexpected cell wall modifications and affects stomatal behaviour in Populus.

J Exp Bot 2015 Oct 5;66(20):6507-18. Epub 2015 Aug 5.

School of Forestry and Natural Resources, University of Georgia, Athens, GA 30602, USA Department of Genetics, University of Georgia, Athens, GA 30602, USA

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/jxb/erv383DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4588895PMC
October 2015

AGEseq: Analysis of Genome Editing by Sequencing.

Mol Plant 2015 Sep 6;8(9):1428-30. Epub 2015 Jun 6.

School of Forestry and Natural Resources, University of Georgia, Athens, GA 30602, USA; Department of Genetics, University of Georgia, Athens, GA 30602, USA; Institute of Bioinformatics, University of Georgia, Athens, GA 30602, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.molp.2015.06.001DOI Listing
September 2015

CorSig: a general framework for estimating statistical significance of correlation and its application to gene co-expression analysis.

PLoS One 2013 23;8(10):e77429. Epub 2013 Oct 23.

Intelligent Computing Lab, Hefei Institutes of Physical Science, Chinese Academy of Sciences, Hefei, China.

View Article

Download full-text PDF

Source
http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0077429PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3806744PMC
February 2015

Condensed tannin biosynthesis and polymerization synergistically condition carbon use, defense, sink strength and growth in Populus.

Tree Physiol 2014 Nov 10;34(11):1240-51. Epub 2013 Dec 10.

Warnell School of Forestry and Natural Resources, University of Georgia, Athens, GA 30602, USA Department of Genetics, University of Georgia, Athens, GA 30602, USA Institute of Bioinformatics, University of Georgia, Athens, GA 30602, USA

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/treephys/tpt097DOI Listing
November 2014

Bayesian phylogeny of sucrose transporters: ancient origins, differential expansion and convergent evolution in monocots and dicots.

Front Plant Sci 2014 12;5:615. Epub 2014 Nov 12.

Institute of Bioinformatics, University of Georgia Athens, GA, USA ; Warnell School of Forestry and Natural Resources, University of Georgia Athens, GA, USA ; Department of Genetics, University of Georgia Athens, GA, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.3389/fpls.2014.00615DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4228843PMC
November 2014

Ectopic expression of a loblolly pine class II 4-coumarate:CoA ligase alters soluble phenylpropanoid metabolism but not lignin biosynthesis in Populus.

Plant Cell Physiol 2014 Sep 12;55(9):1669-78. Epub 2014 Jul 12.

School of Forest Resources and Environmental Sciences, Michigan Technological University, Houghton, MI 49931, USA Warnell School of Forestry and Natural Resources, University of Georgia, Athens, GA 30602, USA Department of Genetics, University of Georgia, Athens, GA 30602, USA

View Article

Download full-text PDF

Source
https://academic.oup.com/pcp/article-lookup/doi/10.1093/pcp/
Publisher Site
http://dx.doi.org/10.1093/pcp/pcu098DOI Listing
September 2014

Stress-responsive hydroxycinnamate glycosyltransferase modulates phenylpropanoid metabolism in Populus.

J Exp Bot 2014 Aug 6;65(15):4191-200. Epub 2014 May 6.

Warnell School of Forestry and Natural Resources, University of Georgia, Athens, GA 30602, USA Department of Genetics, University of Georgia, Athens, GA 30602, USA

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/jxb/eru192DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4112628PMC
August 2014

Wood chemistry analysis and expression profiling of a poplar clone expressing a tyrosine-rich peptide.

Plant Cell Rep 2013 Dec 7;32(12):1827-41. Epub 2013 Sep 7.

Department of Genetics and Biochemistry, Clemson University, 100 Jordan Hall, Clemson, SC, 29634, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1007/s00299-013-1496-0DOI Listing
December 2013

In situ hybridization.

Methods Cell Biol 2013 ;113:339-59

Warnell School of Forestry and Natural Resources, and Department of Genetics, University of Georgia, GA, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/B978-0-12-407239-8.00016-1DOI Listing
June 2013

Next-generation sequencing for next-generation breeding, and more.

Authors:
Chung-Jui Tsai

New Phytol 2013 May;198(3):635-7

Warnell School of Forestry and Natural Resources, Department of Genetics, University of Georgia, Athens, GA 30602, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1111/nph.12245DOI Listing
May 2013

The tonoplast-localized sucrose transporter in Populus (PtaSUT4) regulates whole-plant water relations, responses to water stress, and photosynthesis.

PLoS One 2012 31;7(8):e44467. Epub 2012 Aug 31.

Warnell School of Forestry and Natural Resources and Department of Genetics, University of Georgia, Athens, Georgia, USA.

View Article

Download full-text PDF

Source
http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0044467PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3432113PMC
February 2013

Perfusion flow enhances osteogenic gene expression and the infiltration of osteoblasts and endothelial cells into three-dimensional calcium phosphate scaffolds.

Int J Biomater 2012 4;2012:915620. Epub 2012 Sep 4.

Department of Biomedical Engineering, Michigan Technological University, 1400 Townsend, Houghton, MI 49931, USA.

View Article

Download full-text PDF

Source
http://www.hindawi.com/journals/ijbm/2012/915620/
Publisher Site
http://dx.doi.org/10.1155/2012/915620DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3440867PMC
September 2012

Differential phylogenetic expansions in BAHD acyltransferases across five angiosperm taxa and evidence of divergent expression among Populus paralogues.

BMC Genomics 2011 May 12;12:236. Epub 2011 May 12.

Warnell School of Forestry and Natural Resources, University of Georgia, Athens, GA 30602-2152, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1186/1471-2164-12-236DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3123328PMC
May 2011

The sucrose transporter family in Populus: the importance of a tonoplast PtaSUT4 to biomass and carbon partitioning.

Plant J 2011 Mar 24;65(5):757-70. Epub 2011 Jan 24.

School of Forest Resources and Environmental Sciences, Michigan Technological University, Houghton, MI 49931, USA.

View Article

Download full-text PDF

Source
http://doi.wiley.com/10.1111/j.1365-313X.2010.04463.x
Publisher Site
http://dx.doi.org/10.1111/j.1365-313X.2010.04463.xDOI Listing
March 2011

SLIM: a sliding linear model for estimating the proportion of true null hypotheses in datasets with dependence structures.

Bioinformatics 2011 Jan 18;27(2):225-31. Epub 2010 Nov 18.

Warnell School of Forestry and Natural Resources, University of Georgia, Athens, GA 30602, USA.

View Article

Download full-text PDF

Source
https://academic.oup.com/bioinformatics/article-lookup/doi/1
Publisher Site
http://dx.doi.org/10.1093/bioinformatics/btq650DOI Listing
January 2011

Mechanical stimulation mediates gene expression in MC3T3 osteoblastic cells differently in 2D and 3D environments.

J Biomech Eng 2010 Apr;132(4):041005

Department of Biomedical Engineering, Michigan Technological University, 1400 Townsend Drive, Houghton, MI 49849, USA.

View Article

Download full-text PDF

Source
http://Biomechanical.asmedigitalcollection.asme.org/article.
Publisher Site
http://dx.doi.org/10.1115/1.4001162DOI Listing
April 2010

Biosynthesis of phenolic glycosides from phenylpropanoid and benzenoid precursors in populus.

J Chem Ecol 2010 Mar 23;36(3):286-97. Epub 2010 Feb 23.

School of Forest Resources and Environmental Science, Michigan Technological University, Houghton, MI 49931, USA.

View Article

Download full-text PDF

Source
http://link.springer.com/10.1007/s10886-010-9757-7
Publisher Site
http://dx.doi.org/10.1007/s10886-010-9757-7DOI Listing
March 2010

Gibberellins regulate lateral root formation in Populus through interactions with auxin and other hormones.

Plant Cell 2010 Mar 30;22(3):623-39. Epub 2010 Mar 30.

School of Forest Resources and Environmental Science, Michigan Technological University, Houghton, Michigan 49931-1295, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1105/tpc.109.073239DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2861444PMC
March 2010

A comparative analysis of phenylpropanoid metabolism, N utilization, and carbon partitioning in fast- and slow-growing Populus hybrid clones.

J Exp Bot 2009 10;60(12):3443-52. Epub 2009 Jun 10.

School of Forestry and Natural Resources, University of Georgia, Athens, GA 30602, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/jxb/erp180DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2724693PMC
December 2009

Alternative splicing and gene duplication differentially shaped the regulation of isochorismate synthase in Populus and Arabidopsis.

Proc Natl Acad Sci U S A 2009 Dec 8;106(51):22020-5. Epub 2009 Dec 8.

School of Forest Resources and Environmental Science, Michigan Technological University, Houghton, MI 49931, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1073/pnas.0906869106DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2790362PMC
December 2009

Glycosylation-mediated phenylpropanoid partitioning in Populus tremuloides cell cultures.

BMC Plant Biol 2009 Dec 29;9:151. Epub 2009 Dec 29.

School of Forest Resources and Environmental Science, Michigan Technological University, Houghton, MI 49931, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1186/1471-2229-9-151DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2808312PMC
December 2009

A modified T-vector for simplified assembly of hairpin RNAi constructs.

Biotechnol Lett 2008 Jul 4;30(7):1271-4. Epub 2008 Mar 4.

Biotechnology Research Center, School of Forest Resources and Environmental Science, Michigan Technological University, Houghton, MI 49931, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1007/s10529-008-9673-xDOI Listing
July 2008

An efficient method to identify differentially expressed genes in microarray experiments.

Bioinformatics 2008 Jul 3;24(14):1583-9. Epub 2008 May 3.

Department of Mathematical Sciences, Biotechnology Research Center, School of Forest Resources and Environmental Science, Michigan Technological University, Houghton, MI 49931, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/bioinformatics/btn215DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3607310PMC
July 2008

Development of AFLP and RAPD markers linked to a locus associated with twisted growth in corkscrew willow (Salix matsudana 'Tortuosa').

Tree Physiol 2007 Nov;27(11):1575-83

Faculty of Environmental and Forest Biology, State University of New York, College of Environmental Science and Forestry, Syracuse, NY 13210, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/treephys/27.11.1575DOI Listing
November 2007

Perennial challenges and opportunities.

New Phytol 2007 ;176(1):3-6

Biotechnology Research Center, School of Forest Resources and Environmental Science, Michigan Technological University, Houghton, MI 49931, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1111/j.1469-8137.2007.02221.xDOI Listing
November 2007

Differential expansion and expression of alpha- and beta-tubulin gene families in Populus.

Plant Physiol 2007 Nov 20;145(3):961-73. Epub 2007 Sep 20.

Biotechnology Research Center, School of Forest Resources and Environmental Science , Michigan Technological University, Houghton, Michigan 49931.

View Article

Download full-text PDF

Source
http://www.plantphysiol.org/cgi/doi/10.1104/pp.107.107086
Publisher Site
http://dx.doi.org/10.1104/pp.107.107086DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2048781PMC
November 2007

The seasonal activity and the effect of mechanical bending and wounding on the PtCOMT promoter in Betula pendula Roth.

Plant Cell Rep 2007 Aug 13;26(8):1205-14. Epub 2007 Mar 13.

Finnish Forest Research Institute, Punkaharju Research Unit, Finlandiantie 18, 58450 Punkaharju, Finland.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1007/s00299-007-0331-xDOI Listing
August 2007

The glycine decarboxylase complex multienzyme family in Populus.

J Exp Bot 2007 12;58(7):1761-70. Epub 2007 Mar 12.

Biotechnology Research Center, School of Forest Resources and Environmental Science, Michigan Technological University, Houghton, MI 49931, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/jxb/erm034DOI Listing
July 2007

Genome-wide analysis of the structural genes regulating defense phenylpropanoid metabolism in Populus.

New Phytol 2006 ;172(1):47-62

Biotechnology Research Center, School of Forest Resources and Environmental Science, Michigan Technological University, Houghton, MI 49931, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1111/j.1469-8137.2006.01798.xDOI Listing
October 2006

Functional genomics analysis of foliar condensed tannin and phenolic glycoside regulation in natural cottonwood hybrids.

Tree Physiol 2005 Dec;25(12):1475-86

Biotechnology Research Center, School of Forest Resources and Environmental Science, Michigan Technological University, Houghton, MI 49931, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/treephys/25.12.1475DOI Listing
December 2005

Metabolic profiling of the sink-to-source transition in developing leaves of quaking aspen.

Plant Physiol 2004 Oct 24;136(2):3364-75. Epub 2004 Sep 24.

Plant Biotechnology Research Center, School of Forest Resources and Environmental Science , Michigan Technological University, Houghton, Michigan 49931, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1104/pp.104.044776DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC523395PMC
October 2004

Suppression subtractive hybridization-mediated transcriptome analysis from multiple tissues of aspen (Populus tremuloides) altered in phenylpropanoid metabolism.

Planta 2004 Aug 14;219(4):694-704. Epub 2004 May 14.

Plant Biotechnology Research Center, School of Forest Resources and Environmental Science, Michigan Technological University, 1400 Townsend Drive, Houghton 49931, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1007/s00425-004-1291-9DOI Listing
August 2004

Joint analysis of two microarray gene-expression data sets to select lung adenocarcinoma marker genes.

BMC Bioinformatics 2004 Jun 24;5:81. Epub 2004 Jun 24.

Department of Mathematical Sciences, Michigan Technological University, Houghton, MI 49931, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1186/1471-2105-5-81DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC476733PMC
June 2004

Expression of a glycine decarboxylase complex H-protein in non-photosynthetic tissues of Populus tremuloides.

Biochim Biophys Acta 2004 Feb;1676(3):266-72

Plant Biotechnology Research Center, School of Forest Resources and Environmental Science, Michigan Technological University, Houghton, MI 49931, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.bbaexp.2003.12.004DOI Listing
February 2004

Differential expression of two distinct phenylalanine ammonia-lyase genes in condensed tannin-accumulating and lignifying cells of quaking aspen.

Plant Physiol 2002 Oct;130(2):796-807

Plant Biotechnology Research Center, School of Forestry and Wood Products, Michigan Technological University, Houghton, MI 49931, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1104/pp.006262DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC166607PMC
October 2002