Publications by authors named "Christine Pourcel"

78Publications

The Basis for Natural Multiresistance to Phage in .

Antibiotics (Basel) 2020 Jun 18;9(6). Epub 2020 Jun 18.

Institute for Integrative Biology of the Cell (I2BC), CEA, CNRS, Université Paris-Saclay, 91198 Gif-sur-Yvette, France.

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http://dx.doi.org/10.3390/antibiotics9060339DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7344871PMC
June 2020

Characterization of sixteen Achromobacter xylosoxidans phages from Abidjan, Côte d'Ivoire, isolated on a single clinical strain.

Arch Virol 2020 Mar 2;165(3):725-730. Epub 2020 Jan 2.

Institute for Integrative Biology of the Cell (I2BC), Université Paris-Saclay, 91198, Gif-sur-Yvette cedex, France.

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http://dx.doi.org/10.1007/s00705-019-04511-7DOI Listing
March 2020

CRISPRCasdb a successor of CRISPRdb containing CRISPR arrays and cas genes from complete genome sequences, and tools to download and query lists of repeats and spacers.

Nucleic Acids Res 2020 01;48(D1):D535-D544

Institute for Integrative Biology of the Cell (I2BC), CEA, CNRS, Univ. Paris-Sud, Université Paris-Saclay, 91198 Gif-sur-Yvette, France.

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http://dx.doi.org/10.1093/nar/gkz915DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7145573PMC
January 2020

Investigation of Pseudomonas aeruginosa strain PcyII-10 variants resisting infection by N4-like phage Ab09 in search for genes involved in phage adsorption.

PLoS One 2019 16;14(4):e0215456. Epub 2019 Apr 16.

Institute for Integrative Biology of the Cell (I2BC), CEA, CNRS, Univ. Paris-Sud, Université Paris-Saclay, Gif-sur-Yvette cedex, France.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0215456PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6467409PMC
January 2020

Impact of FiuA Outer Membrane Receptor Polymorphism on the Resistance of toward Peptidoglycan Lipid II-Targeting PaeM Pyocins.

J Bacteriol 2019 07 10;201(13). Epub 2019 Jun 10.

Institute for Integrative Biology of the Cell (I2BC), CEA, CNRS, Univ Paris-Sud, Université Paris-Saclay, Gif-sur-Yvette, France

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http://dx.doi.org/10.1128/JB.00164-19DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6560139PMC
July 2019

Complete Genome Sequences of Five Acinetobacter baumannii Phages from Abidjan, Côte d'Ivoire.

Microbiol Resour Announc 2019 Jan 3;8(1). Epub 2019 Jan 3.

Institute for Integrative Biology of the Cell (I2BC), CEA, CNRS, Université Paris-Sud, Université Paris-Saclay, Paris, France.

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http://dx.doi.org/10.1128/MRA.01358-18DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6318358PMC
January 2019

Transposition Behavior Revealed by High-Resolution Description of Saltovirus Integration Sites.

Viruses 2018 05 7;10(5). Epub 2018 May 7.

Institute for Integrative Biology of the Cell (I2BC), CEA, CNRS, Univ. Paris-Sud, Université Paris-Saclay, 91198 Gif-sur-Yvette CEDEX, France.

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http://dx.doi.org/10.3390/v10050245DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5977238PMC
May 2018

Associations between Mycobacterium tuberculosis Beijing genotype and drug resistance to four first-line drugs: a survey in China.

Front Med 2018 Feb 29;12(1):92-97. Epub 2017 Dec 29.

State Key Laboratory for Infectious Disease Prevention and Control, Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, 102206, China.

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http://dx.doi.org/10.1007/s11684-017-0610-zDOI Listing
February 2018

CRISPR-like sequences in and application in genotyping.

Gut Pathog 2017 17;9:65. Epub 2017 Nov 17.

Department of Microbiology, Faculty of Science, Prince of Songkla University, Hat Yai, Thailand.

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http://dx.doi.org/10.1186/s13099-017-0215-8DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5693588PMC
November 2017

Recovery and Characterization of Bacteria Resisting Infection by Lytic Bacteriophage.

Methods Mol Biol 2018 ;1693:85-98

Institute for Integrative Biology of the Cell (I2BC), CEA, CNRS, Univ.Paris-Sud, Université Paris-Saclay, 91198, Gif-sur-Yvette Cedex, France.

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http://dx.doi.org/10.1007/978-1-4939-7395-8_8DOI Listing
July 2018

A carrier state is established in Pseudomonas aeruginosa by phage LeviOr01, a newly isolated ssRNA levivirus.

J Gen Virol 2017 Aug 4;98(8):2181-2189. Epub 2017 Aug 4.

Institute for Integrative Biology of the Cell (I2BC), CEA, CNRS, Univ. Paris-Sud, Université Paris-Saclay, Gif-sur-Yvette, France.

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http://dx.doi.org/10.1099/jgv.0.000883DOI Listing
August 2017

Fine structure analysis of lipopolysaccharides in bacteriophage-resistant Pseudomonas aeruginosa PAO1 mutants.

Microbiology (Reading) 2017 06;163(6):848-855

Institute for Integrative Biology of the Cell (I2BC), CEA, CNRS, Univ Paris-Sud, Université Paris-Saclay, 91198 Gif-sur-Yvette cedex, France.

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http://dx.doi.org/10.1099/mic.0.000476DOI Listing
June 2017

Clinical Relevance of Type II Fatty Acid Synthesis Bypass in Staphylococcus aureus.

Antimicrob Agents Chemother 2017 05 24;61(5). Epub 2017 Apr 24.

Micalis Institute, INRA, AgroParisTech, Université Paris-Saclay, Jouy-en-Josas, France

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http://dx.doi.org/10.1128/AAC.02515-16DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5404599PMC
May 2017

Large Preferred Region for Packaging of Bacterial DNA by phiC725A, a Novel Pseudomonas aeruginosa F116-Like Bacteriophage.

PLoS One 2017 6;12(1):e0169684. Epub 2017 Jan 6.

Institute for Integrative Biology of the Cell (I2BC), CEA, CNRS, Univ. Paris-Sud, Université Paris-Saclay, Gif-sur-Yvette, France.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0169684PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5217972PMC
August 2017

[An history of the CRISPR-Cas systems discovery].

Biol Aujourdhui 2017 29;211(4):247-254. Epub 2018 Jun 29.

Institut de Biologie Intégrative de la Cellule (I2BC), CEA, CNRS, Univ. Paris-Sud, Université Paris-Saclay, 91198 Gif-sur-Yvette cedex, France.

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http://dx.doi.org/10.1051/jbio/2018001DOI Listing
February 2019

Complete Genome Sequences of Pseudomonas aeruginosa Phages vB_PaeP_PcyII-10_P3P1 and vB_PaeM_PcyII-10_PII10A.

Genome Announc 2016 Nov 17;4(6). Epub 2016 Nov 17.

Institute for Integrative Biology of the Cell (I2BC), CEA, CNRS, Université Paris-Sud, Université Paris-Saclay, Gif-sur-Yvette, France.

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http://dx.doi.org/10.1128/genomeA.00916-16DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5114362PMC
November 2016

A new genotyping scheme based on MLVA for inter-laboratory surveillance of Streptococcus pyogenes.

J Microbiol Methods 2016 08 11;127:176-181. Epub 2016 Jun 11.

Dept. of Infectious, Parasitic and Immune-mediated Disease, Istituto Superiore di Sanità, Rome, Italy. Electronic address:

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http://dx.doi.org/10.1016/j.mimet.2016.06.010DOI Listing
August 2016

Complete Genome Sequence of PM105, a New Pseudomonas aeruginosa B3-Like Transposable Phage.

Genome Announc 2016 Mar 3;4(2). Epub 2016 Mar 3.

I. I. Mechnikov Research Institute for Vaccines & Sera, Moscow, Russian Federation.

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http://dx.doi.org/10.1128/genomeA.01543-15DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4777764PMC
March 2016

Pseudolysogeny and sequential mutations build multiresistance to virulent bacteriophages in Pseudomonas aeruginosa.

Microbiology (Reading) 2016 05 25;162(5):748-763. Epub 2016 Feb 25.

Institute for Integrative Biology of the Cell (I2BC), CEA, CNRS, Univ. Paris-Sud, Université Paris-Saclay,91198 Gif-sur-Yvette cedex,France.

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http://dx.doi.org/10.1099/mic.0.000263DOI Listing
May 2016

Comparison of French and Worldwide Bacillus anthracis Strains Favors a Recent, Post-Columbian Origin of the Predominant North-American Clade.

PLoS One 2016 22;11(2):e0146216. Epub 2016 Feb 22.

Institute for Integrative Biology of the Cell (I2BC), CEA, CNRS, Univ. Paris-Sud, Université Paris-Saclay, Gif-sur-Yvette, France.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0146216PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4763433PMC
July 2016

A novel multiple locus variable number of tandem repeat (VNTR) analysis (MLVA) method for Propionibacterium acnes.

Infect Genet Evol 2015 Jul 9;33:233-41. Epub 2015 May 9.

Institute for Integrative Biology of the Cell (I2BC), CEA, CNRS, Univ Paris Sud, Université Paris-Saclay, 91405 Orsay cedex, France. Electronic address:

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http://dx.doi.org/10.1016/j.meegid.2015.05.009DOI Listing
July 2015

Diversity of β-lactam resistance mechanisms in cystic fibrosis isolates of Pseudomonas aeruginosa: a French multicentre study.

J Antimicrob Chemother 2013 Aug 29;68(8):1763-71. Epub 2013 Apr 29.

CHRU Jean Minjoz, Centre National de Référence de la résistance aux antibiotiques, Besançon, France.

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http://dx.doi.org/10.1093/jac/dkt115DOI Listing
August 2013

How to identify CRISPRs in sequencing data.

Methods Mol Biol 2012 ;905:15-27

Institut de Génétique et Microbiologie, Université Paris-Sud, Orsay, France.

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http://dx.doi.org/10.1007/978-1-61779-949-5_2DOI Listing
October 2012

Evidence of diversity among epidemiologically related carbapenemase-producing Acinetobacter baumannii strains belonging to international clonal lineage II.

J Clin Microbiol 2012 Mar 11;50(3):590-7. Epub 2012 Jan 11.

Dipartimento di Biologia, Universita` Roma Tre,a and Istituto Nazionale per le Malattie Infettive Lazzaro Spallanzani IRCCS.

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http://dx.doi.org/10.1128/JCM.05555-11DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3295171PMC
March 2012

A multi locus variable number of tandem repeat analysis (MLVA) scheme for Streptococcus agalactiae genotyping.

BMC Microbiol 2011 Jul 27;11:171. Epub 2011 Jul 27.

Université François-Rabelais de Tours, UFR de Médecine, EA 3854 Bactéries et risque materno-fœtal, Institut Fédératif de Recherche 136 Agents Transmissibles et Infectiologie, Tours, France.

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http://dx.doi.org/10.1186/1471-2180-11-171DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3163538PMC
July 2011

Investigation of the population structure of Legionella pneumophila by analysis of tandem repeat copy number and internal sequence variation.

Microbiology (Reading) 2011 Sep 26;157(Pt 9):2582-2594. Epub 2011 May 26.

Université Paris-Sud, Institut de Génétique et Microbiologie, Orsay, France.

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http://dx.doi.org/10.1099/mic.0.047258-0DOI Listing
September 2011

Alternative routes for dissemination of Legionella pneumophila causing three outbreaks in Norway.

Environ Sci Technol 2010 Nov 15;44(22):8712-7. Epub 2010 Oct 15.

Norwegian Defence Research Establishment (FFI), Norway.

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http://dx.doi.org/10.1021/es1007774DOI Listing
November 2010

Molecular characteristics of "Mycobacterium canettii" the smooth Mycobacterium tuberculosis bacilli.

Infect Genet Evol 2010 Dec 6;10(8):1165-73. Epub 2010 Aug 6.

Laboratoire de biologie clinique, HIA Percy, Clamart, France.

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http://dx.doi.org/10.1016/j.meegid.2010.07.016DOI Listing
December 2010

Improved multiple-locus variable-number tandem-repeat assay for Staphylococcus aureus genotyping, providing a highly informative technique together with strong phylogenetic value.

J Clin Microbiol 2009 Oct 26;47(10):3121-8. Epub 2009 Aug 26.

Université Paris-Sud 11, CNRS, UMR8621, Laboratoire GPMS, Institut de Génétique et Microbiologie, 91405 Orsay, France.

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http://dx.doi.org/10.1128/JCM.00267-09DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2756900PMC
October 2009

Multiple locus variable number of tandem repeats analysis.

Methods Mol Biol 2009 ;551:141-58

DGA/D4S -Mission pour la Recherche et l'Innovation Scientifique (MRIS), Armées, and Department of Genetics and Microbiology, University of Paris XI, Orsay, France.

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http://dx.doi.org/10.1007/978-1-60327-999-4_12DOI Listing
July 2009

Clustered regularly interspaced short palindromic repeats (CRISPRs) for the genotyping of bacterial pathogens.

Methods Mol Biol 2009 ;551:105-16

Department of Genetics and Microbiology , University of Paris XI, Orsay, France.

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http://dx.doi.org/10.1007/978-1-60327-999-4_9DOI Listing
July 2009

Comparison of two commercial assays for the characterization of rpoB mutations in Mycobacterium tuberculosis and description of new mutations conferring weak resistance to rifampicin.

J Antimicrob Chemother 2009 Aug 11;64(2):259-62. Epub 2009 Jun 11.

Université Paris-Sud 11, Institut de Génétique et Microbiologie, CNRS, UMR8621, 91405 Orsay, France.

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http://dx.doi.org/10.1093/jac/dkp204DOI Listing
August 2009

Genotyping of Chlamydophila abortus strains by multilocus VNTR analysis.

Vet Microbiol 2009 Jun 24;137(3-4):335-44. Epub 2009 Jan 24.

Unité Zoonoses Bactériennes, Agence Française de Sécurité Sanitaire des Aliments (Lerpaz), 94706 Maisons-Alfort cedex, France.

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http://dx.doi.org/10.1016/j.vetmic.2009.01.029DOI Listing
June 2009

[Establishment of the standard operation program on multiple loci variable numbers tandem repeats analysis typing on Mycobacterium tuberculosis].

Zhonghua Liu Xing Bing Xue Za Zhi 2008 Sep;29(9):919-24

State Key Laboratory for Infectious Diseases Prevention and Control, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing 102206, China.

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September 2008

[Establishment and application of a standard IS6110-RFLP method in the study of molecular genotyping analysis on Mycobacterium tuberculosis].

Zhonghua Liu Xing Bing Xue Za Zhi 2008 Aug;29(8):801-5

State Key Laboratory for Infectious Diseases Prevention and Control, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing 102206, China.

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August 2008

CRISPRcompar: a website to compare clustered regularly interspaced short palindromic repeats.

Nucleic Acids Res 2008 Jul 28;36(Web Server issue):W145-8. Epub 2008 Apr 28.

Univ. Paris-Sud 11, CNRS, UMR8621, Institut de Génétique et Microbiologie, 91405 Orsay, France.

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http://dx.doi.org/10.1093/nar/gkn228DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2447796PMC
July 2008

High resolution typing of Chlamydophila psittaci by multilocus VNTR analysis (MLVA).

Infect Genet Evol 2008 Mar 17;8(2):171-81. Epub 2007 Dec 17.

Bacterial Zoonoses Unit, French Food Safety Agency (AFSSA), 94706 Maisons-Alfort cedex, France.

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http://dx.doi.org/10.1016/j.meegid.2007.12.002DOI Listing
March 2008

On-line resources for bacterial micro-evolution studies using MLVA or CRISPR typing.

Biochimie 2008 Apr 28;90(4):660-8. Epub 2007 Jul 28.

Univ Paris-Sud, Institut de Génétique et Microbiologie, Orsay F-91405, France.

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http://dx.doi.org/10.1016/j.biochi.2007.07.014DOI Listing
April 2008

CRISPRFinder: a web tool to identify clustered regularly interspaced short palindromic repeats.

Nucleic Acids Res 2007 Jul 30;35(Web Server issue):W52-7. Epub 2007 May 30.

Univ Paris-Sud, Institut de Génétique et Microbiologie, UMR 8621, Orsay, F-91405, France.

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http://dx.doi.org/10.1093/nar/gkm360DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1933234PMC
July 2007

The CRISPRdb database and tools to display CRISPRs and to generate dictionaries of spacers and repeats.

BMC Bioinformatics 2007 May 23;8:172. Epub 2007 May 23.

Univ Paris-Sud, Institut de Génétique et Microbiologie, UMR 8621, Orsay, France.

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http://bmcbioinformatics.biomedcentral.com/articles/10.1186/
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http://dx.doi.org/10.1186/1471-2105-8-172DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1892036PMC
May 2007

Identification of variable-number tandem-repeat (VNTR) sequences in Legionella pneumophila and development of an optimized multiple-locus VNTR analysis typing scheme.

J Clin Microbiol 2007 Apr 24;45(4):1190-9. Epub 2007 Jan 24.

Institut de Génétique et Microbiologie, Bât 400, Université Paris-Sud, 91405 Orsay cedex, France.

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http://dx.doi.org/10.1128/JCM.02078-06DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1865833PMC
April 2007

Evaluation and selection of tandem repeat loci for Streptococcus pneumoniae MLVA strain typing.

BMC Microbiol 2005 Nov 16;5:66. Epub 2005 Nov 16.

Laboratoire de Biologie Clinique, HIA Robert Picqué, 351, Route de Toulouse, 33 140 Villenave d'Ornon, France.

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http://dx.doi.org/10.1186/1471-2180-5-66DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1315331PMC
November 2005