Christian Stephan

Christian Stephan

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Christian Stephan

Christian Stephan

Publications by authors named "Christian Stephan"

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A novel trileaflet mechanical heart valve: first in vitro results.

Interact Cardiovasc Thorac Surg 2019 05;28(5):689-694

Department of Cardiac and Thoracic Vascular Surgery, University of Luebeck, Luebeck, Germany.

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http://dx.doi.org/10.1093/icvts/ivy337DOI Listing
May 2019

ProCon - PROteomics CONversion tool.

J Proteomics 2015 Nov 13;129:56-62. Epub 2015 Jul 13.

Medizinisches Proteom Center (MPC), Ruhr-Universität Bochum, D-44801 Bochum, Germany. Electronic address:

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http://dx.doi.org/10.1016/j.jprot.2015.06.015DOI Listing
November 2015

PIA: An Intuitive Protein Inference Engine with a Web-Based User Interface.

J Proteome Res 2015 Jul 10;14(7):2988-97. Epub 2015 Jun 10.

Medizinisches Proteom-Center, Ruhr-Universität Bochum, 44801 Bochum, Germany.

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http://pubs.acs.org/doi/10.1021/acs.jproteome.5b00121
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http://dx.doi.org/10.1021/acs.jproteome.5b00121DOI Listing
July 2015

Comparison of alternative MS/MS and bioinformatics approaches for confident phosphorylation site localization.

J Proteome Res 2014 Feb 3;13(2):1128-37. Epub 2014 Jan 3.

Faculty of Biology, Functional Proteomics, University of Freiburg , 79104 Freiburg, Germany.

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http://dx.doi.org/10.1021/pr400402sDOI Listing
February 2014

A practical data processing workflow for multi-OMICS projects.

Biochim Biophys Acta 2014 Jan 15;1844(1 Pt A):52-62. Epub 2013 Mar 15.

Medizinisches Proteom-Center, Ruhr-Universitaet Bochum, Universitaetsstrasse 150, D-44801 Bochum, Germany. Electronic address:

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http://dx.doi.org/10.1016/j.bbapap.2013.02.029DOI Listing
January 2014

The amino acid's backup bone - storage solutions for proteomics facilities.

Biochim Biophys Acta 2014 Jan 27;1844(1 Pt A):2-11. Epub 2013 May 27.

Medizinisches Proteom-Center, Ruhr-Universität Bochum, Universitätsstrasse 150, D-44801 Bochum, Germany.

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http://dx.doi.org/10.1016/j.bbapap.2013.05.018DOI Listing
January 2014

Computational proteomics in the post-identification era.

Biochim Biophys Acta 2014 Jan;1844(1 Pt A)

Medizinisches Proteom-Center, Ruhr-University Bochum, Universitätsstrasse 150, ZKF E.043, Bochum, 44801, Germany. Electronic address:

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http://dx.doi.org/10.1016/j.bbapap.2013.10.012DOI Listing
January 2014

Search and decoy: the automatic identification of mass spectra.

Methods Mol Biol 2012 ;893:445-88

Department of Medical Proteomics/Bioanalytics, Medizinishchces Proteom-Center, Ruhr-Universität Bochum, Bochum, Germany.

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http://dx.doi.org/10.1007/978-1-61779-885-6_28DOI Listing
September 2012

Find pairs: the module for protein quantification of the PeakQuant software suite.

OMICS 2012 Sep 21;16(9):457-67. Epub 2012 Aug 21.

Medizinisches Proteom-Center, Ruhr-Universitaet Bochum, Bochum, Germany.

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http://dx.doi.org/10.1089/omi.2011.0140DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3437042PMC
September 2012

Translational proteomics in neurodegenerative diseases--16th HUPO BPP workshop September 5, 2011 Geneva, Switzerland.

Proteomics 2012 Feb;12(3):356-8

Medizinisches Proteom-Center (MPC), Ruhr-Universität Bochum, Bochum, Germany.

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http://dx.doi.org/10.1002/pmic.201290017DOI Listing
February 2012

Sense and nonsense of pathway analysis software in proteomics.

J Proteome Res 2011 Dec 14;10(12):5398-408. Epub 2011 Nov 14.

Functional Proteomics, Medizinisches Proteom-Center, Ruhr-University Bochum, D-44780 Bochum, Germany.

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http://pubs.acs.org/doi/abs/10.1021/pr200654k
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http://dx.doi.org/10.1021/pr200654kDOI Listing
December 2011

Creating a human brain proteome atlas--13th HUPO BPP Workshop March 30-31, 2010, Ochang, Korea.

Proteomics 2011 Jul;11(14):2759-62

Medizinisches Proteom-Center (MPC), Ruhr-Universität Bochum, Bochum, Germany.

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http://dx.doi.org/10.1002/pmic.201190063DOI Listing
July 2011

Quality meets quantity - quality control, data standards and repositories.

Proteomics 2011 Mar 7;11(6):1031-6. Epub 2011 Feb 7.

Medizinisches Proteom-Center, Ruhr-Universitaet Bochum, Bochum, Germany.

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http://dx.doi.org/10.1002/pmic.201000441DOI Listing
March 2011

Human Brain Proteome Project - 12th HUPO BPP Workshop. 26 September 2009, Toronto, Canada.

Proteomics 2010 Jun;10(11):2071-3

Medizinisches Proteom-Center (MPC), Ruhr-Universität Bochum, Bochum, Germany.

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http://dx.doi.org/10.1002/pmic.201090042DOI Listing
June 2010

Peek a peak: a glance at statistics for quantitative label-free proteomics.

Expert Rev Proteomics 2010 Apr;7(2):249-61

Ruhr-Universität Bochum, Zentrum für Klinische Forschung (ZKF 1), Universitätsstrasse 150, 44801 Bochum, Germany.

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http://dx.doi.org/10.1586/epr.09.107DOI Listing
April 2010

Using Laboratory Information Management Systems as central part of a proteomics data workflow.

Proteomics 2010 Mar;10(6):1230-49

Medizinisches Proteom-Center, Ruhr-Universitaet Bochum, Bochum, Germany.

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http://dx.doi.org/10.1002/pmic.200900420DOI Listing
March 2010

Proteomics data collection (ProDaC): publishing and collecting proteomics data sets in public repositories using standard formats.

Methods Mol Biol 2010 ;604:345-68

Medizinisches Proteom-Center (MPC), Ruhr-Universitaet Bochum, Bochum, Germany.

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http://dx.doi.org/10.1007/978-1-60761-444-9_24DOI Listing
February 2010

Proteomics Data Collection - 5th ProDaC Workshop: 4 March 2009, Kolympari, Crete, Greece.

Proteomics 2009 Jul;9(14):3626-9

Medizinisches Proteom-Center, Ruhr-Universitaet Bochum, D-44801 Bochum, Germany.

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http://dx.doi.org/10.1002/pmic.200900205DOI Listing
July 2009

Data handling and processing in proteomics.

Expert Rev Proteomics 2009 Jun;6(3):217-9

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http://dx.doi.org/10.1586/epr.09.15DOI Listing
June 2009

Retention time alignment algorithms for LC/MS data must consider non-linear shifts.

Bioinformatics 2009 Mar 28;25(6):758-64. Epub 2009 Jan 28.

Fakultät Statistik, Technische Universität Dortmund, 44221 Dortmund, Germany.

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http://dx.doi.org/10.1093/bioinformatics/btp052DOI Listing
March 2009

Distinction between human cytochrome P450 (CYP) isoforms and identification of new phosphorylation sites by mass spectrometry.

J Proteome Res 2008 Nov 2;7(11):4678-88. Epub 2008 Oct 2.

Functional Proteomics, Medizinisches Proteom-Center, Ruhr-Universitaet Bochum, Universitaetsstr. 150, ZKF, D-44801 Bochum, Germany.

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http://dx.doi.org/10.1021/pr800231wDOI Listing
November 2008

Proteomics today: bioinformatics at its best. Proteomics and Bioinformatics -- an inseparable couple.

Proteomics 2008 Nov;8(22):4616-7

Medizinisches Proteom-Center, Ruhr-Universität Bochum, Bochum, Germany.

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http://dx.doi.org/10.1002/pmic.200890080DOI Listing
November 2008

Proteomics Data Collection - 3rd ProDaC workshop April 22nd 2008, Toledo, Spain.

Proteomics 2008 Oct;8(20):4163-7

Medizinisches Proteom-Center (MPC), Ruhr-Universitaet Bochum, Bochum, Germany.

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http://doi.wiley.com/10.1002/pmic.200800515
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http://dx.doi.org/10.1002/pmic.200800515DOI Listing
October 2008

Off-target activity of TNF-alpha inhibitors characterized by protein biochips.

Anal Bioanal Chem 2008 Jul 16;391(5):1713-20. Epub 2008 Mar 16.

Department of Pediatric Oncology, Hematology and Clinical Immunology, Jeffrey Modell Immunodeficiency Center, University Children's Hospital Düsseldorf, 40225, Düsseldorf, Germany.

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http://dx.doi.org/10.1007/s00216-008-1938-7DOI Listing
July 2008

Proteomics Data Collection - 2nd ProDaC Workshop 5 October 2007, Seoul, Korea.

Proteomics 2008 Apr;8(7):1326-30

Medizinisches Proteom-Center, Ruhr-Universität Bochum, ZKF E.143, Bochum, Germany.

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http://dx.doi.org/10.1002/pmic.200701098DOI Listing
April 2008

Maintaining standardization: an update of the HUPO Brain Proteome Project.

Expert Rev Proteomics 2008 Apr;5(2):165-73

Medizinisches Proteom-Center, Ruhr-Universitaet Bochum, ZKF E.143, Universitätsstrasse 150, D-44801 Bochum, Germany.

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http://dx.doi.org/10.1586/14789450.5.2.165DOI Listing
April 2008

Inside SMP proteomics: six years German Human Brain Proteome Project (HBPP) - a summary.

Proteomics 2008 Mar;8(6):1118-28

Medizinisches Proteom-Center, Ruhr-Universität Bochum, Bochum, Germany.

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http://dx.doi.org/10.1002/pmic.200700980DOI Listing
March 2008

HUPO Brain Proteome Project: toward a code of conduct.

Mol Cell Proteomics 2008 Feb;7(2):457

Medizinisches Proteom-Center, Ruhr-Universität Bochum, ZKF E.143, Universitätsstrasse 150, D-44801 Bochum, Germany.

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February 2008

Study of early leaf senescence in Arabidopsis thaliana by quantitative proteomics using reciprocal 14N/15N labeling and difference gel electrophoresis.

Mol Cell Proteomics 2008 Jan 18;7(1):108-20. Epub 2007 Sep 18.

Medizinisches Proteom-Center, Zentrum fuer klinische Forschung, Ruhr-Universitaet Bochum, Universitaetsstrasse 150, 44780 Bochum, Germany.

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http://dx.doi.org/10.1074/mcp.M700340-MCP200DOI Listing
January 2008

Proteomics Data Collection - the 1st ProDaC workshop 26 April 2007 Ecole Normale Supérieur, Lyon, France.

Proteomics 2007 Sep;7(17):3034-7

Medizinisches Proteom-Center (MPC), Ruhr-Universitaet Bochum, ZKF E.143, Bochum, Germany.

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http://dx.doi.org/10.1002/pmic.200700554DOI Listing
September 2007

The HUPO pre-congress Proteomics Standards Initiative workshop. HUPO 5th annual World Congress. Long Beach, CA, USA 28 October-1 November 2006.

Proteomics 2007 Apr;7(7):1006-8

EMBL Outstation-European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, UK.

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http://dx.doi.org/10.1002/pmic.200700014DOI Listing
April 2007

A comparison of the HUPO Brain Proteome Project pilot with other proteomics studies.

Proteomics 2006 Sep;6(18):5076-86

Department of Biochemistry and Medical Protein Research, Faculty of Medicine and Health Sciences, Flanders Interuniversity Institute for Biotechnology, Ghent University, Ghent, Belgium.

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http://dx.doi.org/10.1002/pmic.200600291DOI Listing
September 2006

4(th) HUPO Brain Proteome Project Workshop in Munich, Germany.

Proteomics 2006 Jan;6(1):14-5

Medizinisches Proteom-Center, Ruhr-Universitaet Bochum, Universitätsstrasse 150, D-44801 Bochum, Germany.

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http://dx.doi.org/10.1002/pmic.200500738DOI Listing
January 2006

HUPO BPP Workshop on Mouse Models for Neurodegeneration--Choosing the right models.

Proteomics 2005 Sep;5(14):3558-9

Medical Proteom-Center, Ruhr-University Bochum, Bochum, Germany.

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http://dx.doi.org/10.1002/pmic.200500482DOI Listing
September 2005

HUPO Brain Proteome Project Pilot Studies: bioinformatics at work.

Proteomics 2005 Jul;5(11):2716-7

Medical Proteom-Center, Ruhr-University Bochum, Germany.

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http://dx.doi.org/10.1002/pmic.200500426DOI Listing
July 2005

B cells express intracellular but not surface receptors for testosterone and estradiol.

Steroids 2002 Jun;67(7):647-54

Division of Molecular Parasitology and Centre for Biological-Medical Research, Heinrich-Heine-University, 40225 Duesseldorf, Germany.

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http://dx.doi.org/10.1016/s0039-128x(02)00013-2DOI Listing
June 2002