Chikako Ragan

Chikako Ragan

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Chikako Ragan

Chikako Ragan

Publications by authors named "Chikako Ragan"

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Insights into the biogenesis and potential functions of exonic circular RNA.

Sci Rep 2019 Feb 14;9(1):2048. Epub 2019 Feb 14.

EMBL-Australia Collaborating Group, Department of Genome Sciences, The John Curtin School of Medical Research, The Australian National University, Canberra, ACT, 2601, Australia.

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http://dx.doi.org/10.1038/s41598-018-37037-0DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6376117PMC
February 2019

Small non-coding RNA expression from anterior cingulate cortex in schizophrenia shows sex specific regulation.

Schizophr Res 2017 05;183:82-87

Queensland Brain Institute, The University of Queensland, Brisbane, Australia; Queensland Centre for Mental Health Research, The University of Queensland, Brisbane, Queensland, Australia. Electronic address:

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https://linkinghub.elsevier.com/retrieve/pii/S09209964163051
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http://dx.doi.org/10.1016/j.schres.2016.11.024DOI Listing
May 2017

In Planta Determination of the mRNA-Binding Proteome of Arabidopsis Etiolated Seedlings.

Plant Cell 2016 10 11;28(10):2435-2452. Epub 2016 Oct 11.

Division of Plant Science, Research School of Biology, The Australian National University, Canberra ACT 2601, Australia

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http://www.plantcell.org/lookup/doi/10.1105/tpc.16.00562
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http://dx.doi.org/10.1105/tpc.16.00562DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5134986PMC
October 2016

Optimization of signal-to-noise ratio for efficient microarray probe design.

Bioinformatics 2016 09;32(17):i552-i558

National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD 20894, USA.

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http://dx.doi.org/10.1093/bioinformatics/btw451DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5939967PMC
September 2016

The Cardiomyocyte RNA-Binding Proteome: Links to Intermediary Metabolism and Heart Disease.

Cell Rep 2016 08 21;16(5):1456-1469. Epub 2016 Jul 21.

EMBL-Australia Collaborating Group, Department of Genome Sciences, The John Curtin School of Medical Research (JCSMR), The Australian National University, Acton (Canberra) ACT 2601, Australia; Victor Chang Cardiac Research Institute, Darlinghurst (Sydney), NSW 2010, Australia. Electronic address:

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http://dx.doi.org/10.1016/j.celrep.2016.06.084DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4977271PMC
August 2016

Long Noncoding RNA-Directed Epigenetic Regulation of Gene Expression Is Associated With Anxiety-like Behavior in Mice.

Biol Psychiatry 2015 Dec 11;78(12):848-59. Epub 2015 Feb 11.

Queensland Brain Institute, The University of Queensland Australia, Brisbane, Queensland. Electronic address:

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http://dx.doi.org/10.1016/j.biopsych.2015.02.004DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4532653PMC
December 2015

Hybridization-based reconstruction of small non-coding RNA transcripts from deep sequencing data.

Nucleic Acids Res 2012 Sep 16;40(16):7633-43. Epub 2012 Jun 16.

The University of Queensland, Queensland Brain Institute, Brisbane, Qld. 4072, Australia.

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http://dx.doi.org/10.1093/nar/gks505DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3439898PMC
September 2012

Quantitative prediction of miRNA-mRNA interaction based on equilibrium concentrations.

PLoS Comput Biol 2011 Feb 24;7(2):e1001090. Epub 2011 Feb 24.

ARC Centre of Excellence in Bioinformatics, and Institute for Molecular Bioscience, The University of Queensland, Brisbane, Australia.

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http://dx.doi.org/10.1371/journal.pcbi.1001090DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3044769PMC
February 2011

Transcriptome-wide prediction of miRNA targets in human and mouse using FASTH.

PLoS One 2009 May 29;4(5):e5745. Epub 2009 May 29.

The University of Queensland, Institute for Molecular Bioscience, and ARC Centre of Excellence in Bioinformatics, Brisbane, Australia.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0005745PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2684643PMC
May 2009