Publications by authors named "Chieh Lin"

52Publications

Single-cell lineage tracing by integrating CRISPR-Cas9 mutations with transcriptomic data.

Nat Commun 2020 06 16;11(1):3055. Epub 2020 Jun 16.

Computational Biology Department, School of Computer Science, Carnegie Mellon University, Pittsburgh, PA, USA.

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June 2020

Inferring TF activation order in time series scRNA-Seq studies.

PLoS Comput Biol 2020 02 18;16(2):e1007644. Epub 2020 Feb 18.

Machine Learning Department, School of Computer Science, Carnegie Mellon University, Pittsburgh, Pennsylvania, United States of America.

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February 2020

Staging and clinical correlations of lymphoscintigraphy for unilateral gynecological cancer-related lymphedema.

J Surg Oncol 2020 Mar 25;121(3):422-434. Epub 2019 Dec 25.

Division of Reconstructive Microsurgery, Department of Plastic and Reconstructive Surgery Chang Gung Memorial Hospital, College of Medicine, Chang Gung University, Taoyuan, Taiwan.

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March 2020

Intra-abdominal chylovenous bypass treats retroperitoneal lymphangiomatosis.

J Surg Oncol 2020 Jan 4;121(1):75-84. Epub 2019 Jul 4.

Division of Reconstructive Microsurgery, Department of Plastic and Reconstructive Surgery, Chang Gung Memorial Hospital, College of Medicine, Chang Gung University, Taoyuan, Taiwan.

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January 2020

Infrared Brazed Joints of TiNi Shape Memory Alloy and Ti-15-3 Alloy Using Two Ag-Based Fillers.

Materials (Basel) 2019 May 16;12(10). Epub 2019 May 16.

Department of Materials Science and Engineering, National Taiwan University, Taipei 106, Taiwan.

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May 2019

Continuous-state HMMs for modeling time-series single-cell RNA-Seq data.

Bioinformatics 2019 11;35(22):4707-4715

Machine Learning Department, School of Computer Science, Carnegie Mellon University, Pittsburgh, PA 15213, US.

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November 2019

A kernel-based image denoising method for improving parametric image generation.

Med Image Anal 2019 07 17;55:41-48. Epub 2019 Apr 17.

Department of Nuclear Medicine, Chang Gung Memorial Hospital, No. 5 Fu-Shin Street, Kwei-Shan, Taoyuan County, Taiwan.

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July 2019

A Study on the Hall-Petch Relationship and Grain Growth Kinetics in FCC-Structured High/Medium Entropy Alloys.

Entropy (Basel) 2019 Mar 19;21(3). Epub 2019 Mar 19.

Department of Materials Science and Engineering, National Taiwan University, Taipei 106, Taiwan.

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March 2019

Infrared Brazing of CoCrFeMnNi Equiatomic High Entropy Alloy Using Nickel-Based Braze Alloys.

Entropy (Basel) 2019 Mar 15;21(3). Epub 2019 Mar 15.

Department of Mechanical Engineering, National Taiwan University, Taipei 106, Taiwan.

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March 2019

Cell lineage inference from SNP and scRNA-Seq data.

Nucleic Acids Res 2019 06;47(10):e56

Computational Biology Department, Carnegie Mellon University, 5000 Forbes Ave, Pittsburgh, PA 15213, USA.

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June 2019

Indirect methods for improving parameter estimation of PET kinetic models.

Med Phys 2019 Apr 4;46(4):1777-1784. Epub 2019 Mar 4.

Department of Nuclear Medicine, Chang Gung Memorial Hospital, No. 5 Fu-Shin Street, Kwei-Shan, Taoyuan County, Taiwan.

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April 2019

Transcription factor-based biosensor for detection of phenylalanine and tyrosine in urine for diagnosis of phenylketonuria.

Anal Chim Acta 2018 Dec 29;1041:108-113. Epub 2018 Aug 29.

Department of Chemistry, National Taiwan Normal University, Taiwan. Electronic address:

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December 2018

Acoustic Radiation Force Impulse Elastography: Tissue Stiffness Measurement in Limb Lymphedema.

Radiology 2018 12 14;289(3):759-765. Epub 2018 Aug 14.

From the Department of Medical Imaging and Intervention, Chang Gung Memorial Hospital, Linkou, Institute for Radiological Research, College of Medicine, Chang Gung University, 5 Fuxing St, Guishan Dist, Taoyuan 33305, Taiwan (W.H.C., Y.L.H., S.Y.C.); Department of Nuclear Medicine, Chang Gung Memorial Hospital, Taoyuan, Taiwan (C.L.); and Department of Plastic and Reconstructive Surgery, Chang Gung Memorial Hospital, Chang Gung University, College of Medicine, Taoyuan, Taiwan (C.Y.L., M.H.C.).

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December 2018

A general-threshold filtering method for improving intravoxel incoherent motion parameter estimates.

Phys Med Biol 2018 08 30;63(17):175008. Epub 2018 Aug 30.

Department of Nuclear Medicine, Chang Gung Memorial Hospital, No. 5 Fuxing Street, Gueishan Dist., Taoyuan 33305, Taiwan.

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August 2018

Determination of Gold Ions in Human Urine Using Genetically Engineered Microorganisms on a Paper Device.

ACS Sens 2018 04 30;3(4):744-748. Epub 2018 Mar 30.

Department of Chemistry , National Taiwan Normal University , Taipei 116 , Taiwan.

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April 2018

An efficient computer-aided structural elucidation strategy for mixtures using an iterative dynamic programming algorithm.

J Cheminform 2017 Nov 15;9(1):57. Epub 2017 Nov 15.

Department of Computer Science and Information Engineering, National Taiwan University, No. 1 Sec. 4, Roosevelt Road, Taipei, 106, Taiwan.

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November 2017

Whole-Body Diffusion-weighted MR Imaging of Iron Deposits in Hodgkin, Follicular, and Diffuse Large B-Cell Lymphoma.

Radiology 2018 02 6;286(2):560-567. Epub 2017 Oct 6.

From the Department of Nuclear Medicine (A.S.C., E.I.), Department of Medical Imaging (A.S.C., S.M., P.Z., V.T., A.L., A.R.), Lymphoid Malignancies Unit (K.B., E.S., C.H.), and Department of Pathology (C.C.B., A.B.), AP-HP, Groupe Henri Mondor Albert Chenevier, CHU Henri Mondor, 51 Avenue du Marechal de Lattre de Tassigny, Université Paris Est Créteil, 94010 Creteil, France; Department of Nuclear Medicine, Chang Gung Memorial Hospital, Taoyuan, Taiwan (C.L.); NeuroSpin, Gif-sur-Yvette, France (A.V.); INSERM IMRB U955 Equipe 18, Paris, France (V.T., A.L.); and UPEC, Paris, France (V.T., A.L., A.R.).

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February 2018

Using neural networks for reducing the dimensions of single-cell RNA-Seq data.

Nucleic Acids Res 2017 Sep;45(17):e156

Machine Learning Department, School of Computer Science, Carnegie Mellon University, Pittsburgh, PA 15213, USA.

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September 2017

IDH2 Mutation in a Patient with Metastatic Colon Cancer.

N Engl J Med 2017 05;376(20):1991-2

Stanford University School of Medicine, Stanford, CA.

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May 2017

Total variation-based method for generation of intravoxel incoherent motion parametric images in MRI.

Magn Reson Med 2017 10 31;78(4):1383-1391. Epub 2016 Oct 31.

Department of Nuclear Medicine and Center for Advanced Molecular Imaging and Translation, Chang Gung Memorial Hospital, No. 5 Fu-Shin Street, Kwei-Shan, Taoyuan County, Taiwan.

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October 2017

Formation of parametric images using mixed-effects models: a feasibility study.

NMR Biomed 2016 Mar 22;29(3):239-47. Epub 2015 Dec 22.

Department of Nuclear Medicine, Linkou Chang Gung Memorial Hospital, Taoyuan City, Taiwan (ROC).

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March 2016

Intravoxel Incoherent Motion Diffusion-weighted Imaging of Multiple Myeloma Lesions: Correlation with Whole-Body Dynamic Contrast Agent-enhanced MR Imaging.

Radiology 2015 Dec 1;277(3):773-83. Epub 2015 Jul 1.

From the Department of Medical Imaging, AP-HP, Hôpitaux Universitaires Henri Mondor, 51 Avenue du Marechal de Lattre de Tassigny, 94010 Creteil Cedex, F-94010, France (C.B., A.R., P.B., P.Z., F.P., H.B., M.C., A.B., A.L.); Université Paris Descartes, Paris, France (C.B., C.A.C., A.L.); Faculty of Medicine, Université Paris Est Creteil, Creteil, France (A.R., M.C., C.H.); Department of Nuclear Medicine, Chang Gung Memorial Hospital and Chang Gung University, Taoyuan, Taiwan (C.L.); Lymphomproliferative Unit, AP-HP, Hôpitaux Universitaires Henri Mondor, Creteil, France (K.B., C.H.); I2BM, CEA, Saclay, France (A.V.); Department of Radiology, AP-HP, Hôpital Européen Georges Pompidou, Paris, France (C.A.C.); and INSERM U 955, Equipe 18, Creteil, France (A.L.).

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December 2015

Rule-Based Prediction Models of Cytochrome P450 Inhibition.

J Chem Inf Model 2015 Jul 2;55(7):1426-34. Epub 2015 Jul 2.

‡Graduate Institute of Biomedical Electronics and Bioinformatics and §Department of Computer Science and Information Engineering, National Taiwan University, No. 1 Sec. 4, Roosevelt Road, Taipei, Taiwan 106.

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July 2015

Whole-Body Diffusion-weighted Imaging in Hodgkin Lymphoma and Diffuse Large B-Cell Lymphoma.

Radiographics 2015 May-Jun;35(3):747-64. Epub 2015 Mar 27.

From the Department of Medical Imaging (S.T.M., A.L., P.Z., L.B., A.R.), Department of Nuclear Medicine (E.I., L.B.), and Lymphoproliferative Unit (K.B., C.H.), AP-HP, Groupe Henri Mondor Albert Chenevier, CHU Henri Mondor, 51 Avenue du Marechal de Lattre de Tassigny, 94010 Creteil, France; Faculty of Medicine, Université Paris Est Creteil, Creteil, France (A.L., E.I., L.B., C.H., A.R.); Neurospin, CEA, Saclay, France (A.V.); and Department of Nuclear Medicine and Molecular Imaging Center, Chang Gung Memorial Hospital, Gueishan, Taiwan (C.L.).

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February 2016

CypRules: a rule-based P450 inhibition prediction server.

Bioinformatics 2015 Jun 22;31(11):1869-71. Epub 2015 Jan 22.

Graduate Institute of Biomedical Electronics and Bioinformatics and Department of Computer Science and Information Engineering, National Taiwan University, No.1 Sec.4, Roosevelt Road, Taipei, Taiwan 106 Graduate Institute of Biomedical Electronics and Bioinformatics and Department of Computer Science and Information Engineering, National Taiwan University, No.1 Sec.4, Roosevelt Road, Taipei, Taiwan 106.

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June 2015

Potential false-positive meckel scan due to displaced kidney caused by recurrent retroperitoneal teratoma.

Clin Nucl Med 2014 Oct;39(10):e433-5

From the Departments of *Nuclear Medicine and Molecular Imaging Center; †Anatomic Pathology; and ‡Medical Imaging and Intervention, Chang Gung Memorial Hospital, Chang Gung University, College of Medicine, Taoyuan, Taiwan.

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October 2014

(11)C-acetate as a new biomarker for PET/CT in patients with multiple myeloma: initial staging and postinduction response assessment.

Eur J Nucl Med Mol Imaging 2014 Jan 16;41(1):41-9. Epub 2013 Oct 16.

Department of Nuclear Medicine and Molecular Imaging Center, Chang Gung Memorial Hospital, No. 5 Fusing Street, Gueishan, 33305, Taiwan.

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January 2014

MRI of bone marrow abnormalities in hematological malignancies.

Diagn Interv Radiol 2013 Sep-Oct;19(5):393-9

Department of Radiology, Boston University School of Medicine, Boston, MA, USA.

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June 2014

Whole-body diffusion magnetic resonance imaging in the assessment of lymphoma.

Cancer Imaging 2012 Sep 28;12:403-8. Epub 2012 Sep 28.

Department of Nuclear Medicine and Molecular Imaging Center, Chang Gung Memorial Hospital and Chang Gung University, Gueishan, Taoyuan, Taiwan.

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September 2012

Node/aorta and node/liver SUV ratios from (18)F-FDG PET/CT may improve the detection of occult mediastinal lymph node metastases in patients with non-small cell lung carcinoma.

Acad Radiol 2012 Jun 28;19(6):685-92. Epub 2012 Mar 28.

Department of Nuclear Medicine and Molecular Imaging Center, Chang Gung Memorial Hospital, Chang Gung University College of Medicine, Linkou, 5 Fu-Shin Street, Kueishan, Taoyuan 333, Taiwan.

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June 2012

Site-specific endometrial injury improves implantation and pregnancy in patients with repeated implantation failures.

Reprod Biol Endocrinol 2011 Oct 21;9:140. Epub 2011 Oct 21.

Department of Obstetrics and Gynecology, Chang Gung Memorial Hospital Linkou Medical Center, Chang Gung University, 5 Fu-Shin Street, Kweishan, Taoyuan, Taiwan.

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October 2011

PCDD/Fs formation catalyzed by the copper chloride in the fly ash.

J Environ Sci Health A Tox Hazard Subst Environ Eng 2011 ;46(5):465-70

Department of Environmental Engineering and Science, National Pingtung University of Science and Technology, Pingtung County, Taiwan.

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July 2011

Improvement of early 18F-FDG PET interpretation in diffuse large B-cell lymphoma: importance of the reference background.

J Nucl Med 2010 Dec 15;51(12):1857-62. Epub 2010 Nov 15.

Department of Nuclear Medicine, H Mondor Hospital, Assistance Publique-Hôpitaux de Paris, Créteil, France.

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December 2010

Characterization of PCDD/Fs, PAHs, and heavy metals in a secondary aluminum smelter.

J Environ Sci Health A Tox Hazard Subst Environ Eng 2009 Nov;44(13):1335-42

Department of Environmental Engineering and Science, National Pingtung University of Science and Technology, Pingtung County, Taiwan.

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November 2009

Multiple myeloma treatment response assessment with whole-body dynamic contrast-enhanced MR imaging.

Radiology 2010 Feb;254(2):521-31

Department of Medical Imaging, AP-HP, Groupe Henri-Mondor Albert-Chenevier, 51 Avenue du Malréchal de Lattre de Tassigny, 94010 Créteil, France.

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February 2010

Prognostic value of interim 18F-FDG PET in patients with diffuse large B-Cell lymphoma: SUV-based assessment at 4 cycles of chemotherapy.

J Nucl Med 2009 Apr 16;50(4):527-33. Epub 2009 Mar 16.

Department of Nuclear Medicine, H. Mondor Hospital, Assistance Publique-Hôpitaux de Paris, Paris 12 University, UMR CNRS 7054, Créteil, France.

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April 2009

Bone marrow involvement in diffuse large B-cell lymphoma: correlation between FDG-PET uptake and type of cellular infiltrate.

Eur J Nucl Med Mol Imaging 2009 May 19;36(5):745-50. Epub 2008 Dec 19.

Department of Nuclear Medicine, Hôpital Henri Mondor, Assistance Publique-Hôpitaux de Paris (AP-HP), Université Paris 12, F-94000 Créteil, France.

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May 2009

Polychlorinated dibenzo-p-dioxins/dibenzofuran mass distribution in both start-up and normal condition in the whole municipal solid waste incinerator.

J Hazard Mater 2008 Dec 29;160(1):37-44. Epub 2008 Feb 29.

Department of Environmental Engineering and Science, National Pingtung University of Science and Technology, Ping Tung, Taiwan.

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December 2008

Whole body MRI and PET/CT in haematological malignancies.

Cancer Imaging 2007 Oct 1;7 Spec No A:S88-93. Epub 2007 Oct 1.

Department of Radiology, Centre Hospitalo-Universitaire Henri Mondor, 51, Avenue du Maréchal de Lattre de Tassigny, 94010 Créteil, France.

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October 2007

The size distribution of polychlorinated dibenzo-p-dioxins and dibenzofurans in the bottom ash of municipal solid waste incinerators.

Chemosphere 2006 Oct 12;65(3):514-20. Epub 2006 May 12.

Department of Environmental Engineering and Science, National Pingtung University of Science and Technology, Nei Pu 91207, Ping Tung, Taiwan, ROC.

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October 2006

Characteristics of PCDD/F congener distributions in gas/particulate phases and emissions from two municipal solid waste incinerators in Taiwan.

Sci Total Environ 2005 Jul;347(1-3):148-62

Graduate Institute of Environmental Engineering, National Central University, Chungli 320, Taiwan.

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July 2005

POWER: PhylOgenetic WEb Repeater--an integrated and user-optimized framework for biomolecular phylogenetic analysis.

Nucleic Acids Res 2005 Jul;33(Web Server issue):W553-6

Division of Biostatistics and Bioinformatics, National Health Research Institutes, 35 Keyan Road, Zhunan Town, Miaoli County 350, Taiwan.

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July 2005

Source identification of PCDD/Fs for various atmospheric environments in a highly industrialized city.

Environ Sci Technol 2004 Oct;38(19):4937-44

Department of Chemical Engineering, Cheng Shiu University, Kaohsiung 833, Taiwan.

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October 2004

Soluble CD26/30 levels before and after treatment with interferon-alpha and ribavirin combination therapy in a pediatric hepatitis C patient.

J Microbiol Immunol Infect 2004 Feb;37(1):67-70

Division of Immunology, Rheumatology and Allergy, Department of Pediatrics, Taichung Veterans General Hospital, Taichung, Taiwan, ROC.

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February 2004