Cheng-Ting Yeh

Cheng-Ting Yeh

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Cheng-Ting Yeh

Cheng-Ting Yeh

Publications by authors named "Cheng-Ting Yeh"

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31Publications

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Linked read technology for assembling large complex and polyploid genomes.

BMC Genomics 2018 Sep 4;19(1):651. Epub 2018 Sep 4.

Department of Agronomy, Iowa State University, Ames, IA, 50011, USA.

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http://dx.doi.org/10.1186/s12864-018-5040-zDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6122573PMC
September 2018

tGBS® genotyping-by-sequencing enables reliable genotyping of heterozygous loci.

Nucleic Acids Res 2017 Dec;45(21):e178

Department of Agronomy, Iowa State University, Ames, IA 50011-3650, USA.

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http://dx.doi.org/10.1093/nar/gkx853DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5716196PMC
December 2017

The maize brown midrib4 (bm4) gene encodes a functional folylpolyglutamate synthase.

Plant J 2015 Feb 9;81(3):493-504. Epub 2015 Jan 9.

Department of Agronomy, Iowa State University, 2035 Roy J. Carver Co-Lab, Ames, IA, 50011-3650, USA; College of Agronomy, Northwest Agriculture and Forestry University, #3, Taicheng road, Yangling, Shaanxi, 712100, China.

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http://dx.doi.org/10.1111/tpj.12745DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4329605PMC
February 2015

Nonsyntenic genes drive highly dynamic complementation of gene expression in maize hybrids.

Plant Cell 2014 Oct 14;26(10):3939-48. Epub 2014 Oct 14.

Institute of Crop Science and Resource Conservation, Crop Functional Genomics, University of Bonn, 53113 Bonn, Germany

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http://dx.doi.org/10.1105/tpc.114.130948DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4247586PMC
October 2014

The Aux/IAA gene rum1 involved in seminal and lateral root formation controls vascular patterning in maize (Zea mays L.) primary roots.

J Exp Bot 2014 Sep 13;65(17):4919-30. Epub 2014 Jun 13.

INRES, Institute of Crop Science and Resource Conservation, Crop Functional Genomics, University of Bonn, Friedrich-Ebert-Allee 144, 53113 Bonn, Germany

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http://dx.doi.org/10.1093/jxb/eru249DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4144770PMC
September 2014

The maize brown midrib2 (bm2) gene encodes a methylenetetrahydrofolate reductase that contributes to lignin accumulation.

Plant J 2014 Feb 10;77(3):380-92. Epub 2014 Jan 10.

Department of Genetics, Development and Cell Biology, Iowa State University, Ames, IA, 50011, USA.

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http://dx.doi.org/10.1111/tpj.12394DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4282534PMC
February 2014

Spreading of heterochromatin is limited to specific families of maize retrotransposons.

PLoS Genet 2012 13;8(12):e1003127. Epub 2012 Dec 13.

Microbial and Plant Genomics Institute, Department of Plant Biology, University of Minnesota, Saint Paul, Minnesota, United States of America.

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http://dx.doi.org/10.1371/journal.pgen.1003127DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3521669PMC
May 2013

Complementation contributes to transcriptome complexity in maize (Zea mays L.) hybrids relative to their inbred parents.

Genome Res 2012 Dec 19;22(12):2445-54. Epub 2012 Oct 19.

Institute of Crop Science and Resource Conservation, Division of Crop Functional Genomics, University of Bonn, 53113 Bonn, Germany.

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http://dx.doi.org/10.1101/gr.138461.112DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3514674PMC
December 2012

Changes in genome content generated via segregation of non-allelic homologs.

Plant J 2012 Nov 30;72(3):390-9. Epub 2012 Aug 30.

Department of Agronomy, 2035 Roy J. Carver Co-Lab, Iowa State University, Ames, IA 50011, USA.

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http://dx.doi.org/10.1111/j.1365-313X.2012.05087.xDOI Listing
November 2012

Gene mapping via bulked segregant RNA-Seq (BSR-Seq).

PLoS One 2012 7;7(5):e36406. Epub 2012 May 7.

Department of Agronomy, Iowa State University, Ames, Iowa, USA.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0036406PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3346754PMC
September 2012

Parent-of-origin effects on gene expression and DNA methylation in the maize endosperm.

Plant Cell 2011 Dec 23;23(12):4221-33. Epub 2011 Dec 23.

Department of Plant Biology, Microbial and Plant Genomics Institute, University of Minesota, Saint Paul, Minesota 55108, USA.

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http://www.plantcell.org/cgi/doi/10.1105/tpc.111.092668
Publisher Site
http://dx.doi.org/10.1105/tpc.111.092668DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3269861PMC
December 2011

Heritable epigenetic variation among maize inbreds.

PLoS Genet 2011 Nov 17;7(11):e1002372. Epub 2011 Nov 17.

Microbial and Plant Genomics Institute, Department of Plant Biology, University of Minnesota, Saint Paul, Minnesota, USA.

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http://dx.doi.org/10.1371/journal.pgen.1002372DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3219600PMC
November 2011

The B73 maize genome: complexity, diversity, and dynamics.

Authors:
Patrick S Schnable Doreen Ware Robert S Fulton Joshua C Stein Fusheng Wei Shiran Pasternak Chengzhi Liang Jianwei Zhang Lucinda Fulton Tina A Graves Patrick Minx Amy Denise Reily Laura Courtney Scott S Kruchowski Chad Tomlinson Cindy Strong Kim Delehaunty Catrina Fronick Bill Courtney Susan M Rock Eddie Belter Feiyu Du Kyung Kim Rachel M Abbott Marc Cotton Andy Levy Pamela Marchetto Kerri Ochoa Stephanie M Jackson Barbara Gillam Weizu Chen Le Yan Jamey Higginbotham Marco Cardenas Jason Waligorski Elizabeth Applebaum Lindsey Phelps Jason Falcone Krishna Kanchi Thynn Thane Adam Scimone Nay Thane Jessica Henke Tom Wang Jessica Ruppert Neha Shah Kelsi Rotter Jennifer Hodges Elizabeth Ingenthron Matt Cordes Sara Kohlberg Jennifer Sgro Brandon Delgado Kelly Mead Asif Chinwalla Shawn Leonard Kevin Crouse Kristi Collura Dave Kudrna Jennifer Currie Ruifeng He Angelina Angelova Shanmugam Rajasekar Teri Mueller Rene Lomeli Gabriel Scara Ara Ko Krista Delaney Marina Wissotski Georgina Lopez David Campos Michele Braidotti Elizabeth Ashley Wolfgang Golser HyeRan Kim Seunghee Lee Jinke Lin Zeljko Dujmic Woojin Kim Jayson Talag Andrea Zuccolo Chuanzhu Fan Aswathy Sebastian Melissa Kramer Lori Spiegel Lidia Nascimento Theresa Zutavern Beth Miller Claude Ambroise Stephanie Muller Will Spooner Apurva Narechania Liya Ren Sharon Wei Sunita Kumari Ben Faga Michael J Levy Linda McMahan Peter Van Buren Matthew W Vaughn Kai Ying Cheng-Ting Yeh Scott J Emrich Yi Jia Ananth Kalyanaraman An-Ping Hsia W Brad Barbazuk Regina S Baucom Thomas P Brutnell Nicholas C Carpita Cristian Chaparro Jer-Ming Chia Jean-Marc Deragon James C Estill Yan Fu Jeffrey A Jeddeloh Yujun Han Hyeran Lee Pinghua Li Damon R Lisch Sanzhen Liu Zhijie Liu Dawn Holligan Nagel Maureen C McCann Phillip SanMiguel Alan M Myers Dan Nettleton John Nguyen Bryan W Penning Lalit Ponnala Kevin L Schneider David C Schwartz Anupma Sharma Carol Soderlund Nathan M Springer Qi Sun Hao Wang Michael Waterman Richard Westerman Thomas K Wolfgruber Lixing Yang Yeisoo Yu Lifang Zhang Shiguo Zhou Qihui Zhu Jeffrey L Bennetzen R Kelly Dawe Jiming Jiang Ning Jiang Gernot G Presting Susan R Wessler Srinivas Aluru Robert A Martienssen Sandra W Clifton W Richard McCombie Rod A Wing Richard K Wilson

Science 2009 Nov;326(5956):1112-5

Center for Plant Genomics, Iowa State University, Ames, IA 50011, USA.

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http://www.dawelab.org/wp-content/uploads/2011/03/schnable-2
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http://www.sciencemag.org/cgi/doi/10.1126/science.1178534
Publisher Site
http://dx.doi.org/10.1126/science.1178534DOI Listing
November 2009