Chatarina Larsson

Chatarina Larsson

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Chatarina Larsson

Chatarina Larsson

Publications by authors named "Chatarina Larsson"

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14Publications

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Somatic c.4467delA mutations in colorectal cancers control histone methylation and tumor growth.

Oncotarget 2017 Nov 9;8(58):98646-98659. Epub 2017 Oct 9.

Science for Life Laboratory, Department of Immunology, Genetics and Pathology, Uppsala University, Uppsala, Sweden.

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http://dx.doi.org/10.18632/oncotarget.21713DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5716757PMC
November 2017

Loss of DIP2C in RKO cells stimulates changes in DNA methylation and epithelial-mesenchymal transition.

BMC Cancer 2017 Jul 17;17(1):487. Epub 2017 Jul 17.

Department of Immunology, Genetics and Pathology, Uppsala University, Rudbeck Laboratory, Dag Hammarskjölds väg 20, SE-751 85, Uppsala, Sweden.

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http://dx.doi.org/10.1186/s12885-017-3472-5DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5513093PMC
July 2017

Oligonucleotide gap-fill ligation for mutation detection and sequencing in situ.

Nucleic Acids Res 2015 Dec 3;43(22):e151. Epub 2015 Aug 3.

Science for Life Laboratory, Department of Biochemistry and Biophysics, Stockholm University, Stockholm, SE-17121 Sweden

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http://dx.doi.org/10.1093/nar/gkv772DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4678841PMC
December 2015

Gene rearrangements in hormone receptor negative breast cancers revealed by mate pair sequencing.

BMC Genomics 2013 Mar 12;14:165. Epub 2013 Mar 12.

Department of Immunology, Genetics, and Pathology, Uppsala University, Uppsala, SE 751 85, Sweden.

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http://dx.doi.org/10.1186/1471-2164-14-165DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3600027PMC
March 2013

In situ detection of individual mRNA molecules and protein complexes or post-translational modifications using padlock probes combined with the in situ proximity ligation assay.

Nat Protoc 2013 Feb 24;8(2):355-72. Epub 2013 Jan 24.

Science for Life Laboratory, Department of Immunology, Genetics and Pathology, Uppsala University, Uppsala, Sweden.

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http://dx.doi.org/10.1038/nprot.2013.006DOI Listing
February 2013

Analysis of genes, transcripts, and proteins via DNA ligation.

Annu Rev Anal Chem (Palo Alto Calif) 2009 ;2:215-39

Department of Genetics and Pathology, The Rudbeck Lab, Uppsala University, Uppsala, Sweden.

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http://dx.doi.org/10.1146/annurev-anchem-060908-155239DOI Listing
October 2010

In situ detection and genotyping of individual mRNA molecules.

Nat Methods 2010 May 11;7(5):395-7. Epub 2010 Apr 11.

Department of Genetics and Pathology, Uppsala University, Sweden.

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http://www.nature.com/articles/nmeth.1448
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http://dx.doi.org/10.1038/nmeth.1448DOI Listing
May 2010

Ligation-based molecular tools for lab-on-a-chip devices.

N Biotechnol 2008 Jun 1;25(1):42-8. Epub 2008 May 1.

Department of Genetics and Pathology, Rudbeck Laboratory, University of Uppsala, SE 75185 Uppsala, Sweden.

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http://dx.doi.org/10.1016/j.nbt.2008.02.003DOI Listing
June 2008

Single-cell A3243G mitochondrial DNA mutation load assays for segregation analysis.

J Histochem Cytochem 2007 Nov 6;55(11):1159-66. Epub 2007 Aug 6.

Department of Molecular Cell Biology, Leiden University Medical Center, Leiden, The Netherlands.

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http://dx.doi.org/10.1369/jhc.7A7282.2007DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3957535PMC
November 2007

Detection of Alu sequences and mtDNA in comets using padlock probes.

Mutagenesis 2006 Jul;21(4):243-7

Institute of Basic Medical Sciences, University of Oslo, PB 1046 Blindern, 0316 Oslo, Norway.

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http://dx.doi.org/10.1093/mutage/gel022DOI Listing
July 2006

Analyzing genes using closing and replicating circles.

Trends Biotechnol 2006 Feb 27;24(2):83-8. Epub 2005 Dec 27.

Department of Genetics and Pathology, Rudbeck Laboratory, Uppsala University, SE-751 85 Uppsala, Sweden.

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http://linkinghub.elsevier.com/retrieve/pii/S016777990500308
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http://dx.doi.org/10.1016/j.tibtech.2005.12.005DOI Listing
February 2006

Prospects for in situ analyses of individual and complexes of DNA, RNA, and protein molecules with padlock and proximity probes.

Methods Cell Biol 2004 ;75:787-97

Department of Genetics and Pathology, University of Uppsala, S-751-85 Uppsala, Sweden.

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http://dx.doi.org/10.1016/s0091-679x(04)75034-7DOI Listing
March 2005

In situ genotyping individual DNA molecules by target-primed rolling-circle amplification of padlock probes.

Nat Methods 2004 Dec 18;1(3):227-32. Epub 2004 Nov 18.

Department of Genetics and Pathology, Rudbeck Laboratory, Uppsala University, Se-75185 Uppsala, Sweden.

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http://dx.doi.org/10.1038/nmeth723DOI Listing
December 2004