Publications by authors named "Charles Addo-Quaye"

13Publications

Whole-Genome Sequence Accuracy Is Improved by Replication in a Population of Mutagenized Sorghum.

G3 (Bethesda) 2018 03 2;8(3):1079-1094. Epub 2018 Mar 2.

Department of Biochemistry, Purdue University, West Lafayette, Indiana 47907

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http://dx.doi.org/10.1534/g3.117.300301DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5844295PMC
March 2018

Forward Genetics by Sequencing EMS Variation-Induced Inbred Lines.

G3 (Bethesda) 2017 02 9;7(2):413-425. Epub 2017 Feb 9.

Department of Biochemistry, Purdue University, West Lafayette, Indiana 47907

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http://dx.doi.org/10.1534/g3.116.029660DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5295590PMC
February 2017

Re-Evaluation of Reportedly Metal Tolerant Arabidopsis thaliana Accessions.

PLoS One 2016 28;11(7):e0130679. Epub 2016 Jul 28.

Department of Horticulture and Landscape Architecture, Purdue University, West Lafayette, Indiana, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0130679PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4965157PMC
July 2017

miRNA-mediated auxin signalling repression during Vat-mediated aphid resistance in Cucumis melo.

Plant Cell Environ 2016 06 10;39(6):1216-27. Epub 2016 Feb 10.

College of Agricultural Sciences, The Pennsylvania State University, University Park, PA, 16802, USA.

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http://doi.wiley.com/10.1111/pce.12645
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http://dx.doi.org/10.1111/pce.12645DOI Listing
June 2016

Expression of small RNA in Aphis gossypii and its potential role in the resistance interaction with melon.

PLoS One 2012 16;7(11):e48579. Epub 2012 Nov 16.

College of Agricultural Sciences, The Pennsylvania State University, University Park, Pennsylvania, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0048579PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3500242PMC
March 2013

Transcriptome-wide identification of microRNA targets in rice.

Plant J 2010 Jun 26;62(5):742-59. Epub 2010 Feb 26.

Department of Biochemistry and Molecular Biology, Oklahoma State University, Stillwater, OK 74078, USA.

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http://dx.doi.org/10.1111/j.1365-313X.2010.04187.xDOI Listing
June 2010

Sliced microRNA targets and precise loop-first processing of MIR319 hairpins revealed by analysis of the Physcomitrella patens degradome.

RNA 2009 Dec 22;15(12):2112-21. Epub 2009 Oct 22.

Huck Institutes of the Life Sciences, Pennsylvania State University, University Park, Pennsylvania 16802, USA.

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http://dx.doi.org/10.1261/rna.1774909DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2779683PMC
December 2009

CleaveLand: a pipeline for using degradome data to find cleaved small RNA targets.

Bioinformatics 2009 Jan 18;25(1):130-1. Epub 2008 Nov 18.

Department of Computer Science and Engineering and Department of Biology, Pennsylvania State University, University Park, PA 16802, USA.

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http://dx.doi.org/10.1093/bioinformatics/btn604DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3202307PMC
January 2009

Endogenous siRNA and miRNA targets identified by sequencing of the Arabidopsis degradome.

Curr Biol 2008 May 8;18(10):758-762. Epub 2008 May 8.

Cell and Developmental Biology Graduate Program, Huck Institutes of the Life Sciences, Pennsylvania State University, University Park, Pennsylvania 16802; Department of Biology, Pennsylvania State University, University Park, Pennsylvania 16802. Electronic address:

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http://dx.doi.org/10.1016/j.cub.2008.04.042DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2583427PMC
May 2008

Evolutionary and biomedical insights from the rhesus macaque genome.

Authors:
Richard A Gibbs Jeffrey Rogers Michael G Katze Roger Bumgarner George M Weinstock Elaine R Mardis Karin A Remington Robert L Strausberg J Craig Venter Richard K Wilson Mark A Batzer Carlos D Bustamante Evan E Eichler Matthew W Hahn Ross C Hardison Kateryna D Makova Webb Miller Aleksandar Milosavljevic Robert E Palermo Adam Siepel James M Sikela Tony Attaway Stephanie Bell Kelly E Bernard Christian J Buhay Mimi N Chandrabose Marvin Dao Clay Davis Kimberly D Delehaunty Yan Ding Huyen H Dinh Shannon Dugan-Rocha Lucinda A Fulton Ramatu Ayiesha Gabisi Toni T Garner Jennifer Godfrey Alicia C Hawes Judith Hernandez Sandra Hines Michael Holder Jennifer Hume Shalini N Jhangiani Vandita Joshi Ziad Mohid Khan Ewen F Kirkness Andrew Cree R Gerald Fowler Sandra Lee Lora R Lewis Zhangwan Li Yih-Shin Liu Stephanie M Moore Donna Muzny Lynne V Nazareth Dinh Ngoc Ngo Geoffrey O Okwuonu Grace Pai David Parker Heidie A Paul Cynthia Pfannkoch Craig S Pohl Yu-Hui Rogers San Juana Ruiz Aniko Sabo Jireh Santibanez Brian W Schneider Scott M Smith Erica Sodergren Amanda F Svatek Teresa R Utterback Selina Vattathil Wesley Warren Courtney Sherell White Asif T Chinwalla Yucheng Feng Aaron L Halpern Ladeana W Hillier Xiaoqiu Huang Pat Minx Joanne O Nelson Kymberlie H Pepin Xiang Qin Granger G Sutton Eli Venter Brian P Walenz John W Wallis Kim C Worley Shiaw-Pyng Yang Steven M Jones Marco A Marra Mariano Rocchi Jacqueline E Schein Robert Baertsch Laura Clarke Miklós Csürös Jarret Glasscock R Alan Harris Paul Havlak Andrew R Jackson Huaiyang Jiang Yue Liu David N Messina Yufeng Shen Henry Xing-Zhi Song Todd Wylie Lan Zhang Ewan Birney Kyudong Han Miriam K Konkel Jungnam Lee Arian F A Smit Brygg Ullmer Hui Wang Jinchuan Xing Richard Burhans Ze Cheng John E Karro Jian Ma Brian Raney Xinwei She Michael J Cox Jeffery P Demuth Laura J Dumas Sang-Gook Han Janet Hopkins Anis Karimpour-Fard Young H Kim Jonathan R Pollack Tomas Vinar Charles Addo-Quaye Jeremiah Degenhardt Alexandra Denby Melissa J Hubisz Amit Indap Carolin Kosiol Bruce T Lahn Heather A Lawson Alison Marklein Rasmus Nielsen Eric J Vallender Andrew G Clark Betsy Ferguson Ryan D Hernandez Kashif Hirani Hildegard Kehrer-Sawatzki Jessica Kolb Shobha Patil Ling-Ling Pu Yanru Ren David Glenn Smith David A Wheeler Ian Schenck Edward V Ball Rui Chen David N Cooper Belinda Giardine Fan Hsu W James Kent Arthur Lesk David L Nelson William E O'brien Kay Prüfer Peter D Stenson James C Wallace Hui Ke Xiao-Ming Liu Peng Wang Andy Peng Xiang Fan Yang Galt P Barber David Haussler Donna Karolchik Andy D Kern Robert M Kuhn Kayla E Smith Ann S Zwieg

Science 2007 Apr;316(5822):222-34

Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX 77030, USA.

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http://dx.doi.org/10.1126/science.1139247DOI Listing
April 2007