Cesare de Filippo

Cesare de Filippo

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Cesare de Filippo

Cesare de Filippo

Publications by authors named "Cesare de Filippo"

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21Publications

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A genetic analysis of the Gibraltar Neanderthals.

Proc Natl Acad Sci U S A 2019 Jul 15;116(31):15610-15615. Epub 2019 Jul 15.

Centre for Human Evolution Research, Department of Earth Sciences, The Natural History Museum, London SW7 5BD, United Kingdom

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http://dx.doi.org/10.1073/pnas.1903984116DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6681707PMC
July 2019

Quantifying and reducing spurious alignments for the analysis of ultra-short ancient DNA sequences.

BMC Biol 2018 10 25;16(1):121. Epub 2018 Oct 25.

Max Planck Institute for Evolutionary Anthropology, 04103, Leipzig, Germany.

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http://dx.doi.org/10.1186/s12915-018-0581-9DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6202837PMC
October 2018

Signatures of Long-Term Balancing Selection in Human Genomes.

Genome Biol Evol 2018 03;10(3):939-955

Department of Evolutionary Genetics, Max Planck Institute for Evolutionary Anthropology, Leipzig, Germany.

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https://academic.oup.com/gbe/article/10/3/939/4938688
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http://dx.doi.org/10.1093/gbe/evy054DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5952967PMC
March 2018

Recent Selection Changes in Human Genes under Long-Term Balancing Selection.

Mol Biol Evol 2016 06 1;33(6):1435-47. Epub 2016 Feb 1.

Department of Evolutionary Genetics, Max Planck Institute for Evolutionary Anthropology, Leipzig, Germany

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http://dx.doi.org/10.1093/molbev/msw023DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4909129PMC
June 2016

Nuclear DNA sequences from the Middle Pleistocene Sima de los Huesos hominins.

Nature 2016 Mar 14;531(7595):504-7. Epub 2016 Mar 14.

Department of Evolutionary Genetics, Max Planck Institute for Evolutionary Anthropology, Deutscher Platz 6, 04103 Leipzig, Germany.

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http://dx.doi.org/10.1038/nature17405DOI Listing
March 2016

A novel candidate region for genetic adaptation to high altitude in Andean populations.

PLoS One 2015 11;10(5):e0125444. Epub 2015 May 11.

Department of Evolutionary Genetics, Max Planck Institute for Evolutionary Anthropology, Leipzig, Germany.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0125444PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4427407PMC
February 2016

Advantageous diversity maintained by balancing selection in humans.

Curr Opin Genet Dev 2014 Dec 29;29:45-51. Epub 2014 Aug 29.

Department of Evolutionary Genetics, Max Planck Institute for Evolutionary Anthropology, Leipzig, Germany. Electronic address:

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http://dx.doi.org/10.1016/j.gde.2014.08.001DOI Listing
December 2014

Ancient human genomes suggest three ancestral populations for present-day Europeans.

Authors:
Iosif Lazaridis Nick Patterson Alissa Mittnik Gabriel Renaud Swapan Mallick Karola Kirsanow Peter H Sudmant Joshua G Schraiber Sergi Castellano Mark Lipson Bonnie Berger Christos Economou Ruth Bollongino Qiaomei Fu Kirsten I Bos Susanne Nordenfelt Heng Li Cesare de Filippo Kay Prüfer Susanna Sawyer Cosimo Posth Wolfgang Haak Fredrik Hallgren Elin Fornander Nadin Rohland Dominique Delsate Michael Francken Jean-Michel Guinet Joachim Wahl George Ayodo Hamza A Babiker Graciela Bailliet Elena Balanovska Oleg Balanovsky Ramiro Barrantes Gabriel Bedoya Haim Ben-Ami Judit Bene Fouad Berrada Claudio M Bravi Francesca Brisighelli George B J Busby Francesco Cali Mikhail Churnosov David E C Cole Daniel Corach Larissa Damba George van Driem Stanislav Dryomov Jean-Michel Dugoujon Sardana A Fedorova Irene Gallego Romero Marina Gubina Michael Hammer Brenna M Henn Tor Hervig Ugur Hodoglugil Aashish R Jha Sena Karachanak-Yankova Rita Khusainova Elza Khusnutdinova Rick Kittles Toomas Kivisild William Klitz Vaidutis Kučinskas Alena Kushniarevich Leila Laredj Sergey Litvinov Theologos Loukidis Robert W Mahley Béla Melegh Ene Metspalu Julio Molina Joanna Mountain Klemetti Näkkäläjärvi Desislava Nesheva Thomas Nyambo Ludmila Osipova Jüri Parik Fedor Platonov Olga Posukh Valentino Romano Francisco Rothhammer Igor Rudan Ruslan Ruizbakiev Hovhannes Sahakyan Antti Sajantila Antonio Salas Elena B Starikovskaya Ayele Tarekegn Draga Toncheva Shahlo Turdikulova Ingrida Uktveryte Olga Utevska René Vasquez Mercedes Villena Mikhail Voevoda Cheryl A Winkler Levon Yepiskoposyan Pierre Zalloua Tatijana Zemunik Alan Cooper Cristian Capelli Mark G Thomas Andres Ruiz-Linares Sarah A Tishkoff Lalji Singh Kumarasamy Thangaraj Richard Villems David Comas Rem Sukernik Mait Metspalu Matthias Meyer Evan E Eichler Joachim Burger Montgomery Slatkin Svante Pääbo Janet Kelso David Reich Johannes Krause

Nature 2014 Sep;513(7518):409-13

1] Institute for Archaeological Sciences, University of Tübingen, Tübingen 72074, Germany. [2] Senckenberg Centre for Human Evolution and Palaeoenvironment, University of Tübingen, 72070 Tübingen, Germany. [3] Max Planck Institut für Geschichte und Naturwissenschaften, Jena 07745, Germany.

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https://genetics.med.harvard.edu/reich/Reich_Lab/Welcome_fil
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http://biorxiv.org/content/biorxiv/early/2013/12/23/001552.f
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http://www.geo.uni-tuebingen.de/fileadmin/website/arbeitsber
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http://www.nature.com/doifinder/10.1038/nature13673
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http://dx.doi.org/10.1038/nature13673DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4170574PMC
September 2014

Bringing together linguistic and genetic evidence to test the Bantu expansion.

Proc Biol Sci 2012 Aug 23;279(1741):3256-63. Epub 2012 May 23.

Max Planck Research Group on Comparative Population Linguistics, Max Planck Institute for Evolutionary Anthropology, Deutscher Platz 6, 04103 Leipzig, Germany.

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http://dx.doi.org/10.1098/rspb.2012.0318DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3385717PMC
August 2012

Y-chromosomal variation in sub-Saharan Africa: insights into the history of Niger-Congo groups.

Mol Biol Evol 2011 Mar 25;28(3):1255-69. Epub 2010 Nov 25.

Max Planck Research Group on Comparative Population Linguistics, Max Planck Institute for Evolutionary Anthropology, Leipzig, Germany.

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http://dx.doi.org/10.1093/molbev/msq312DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3561512PMC
March 2011

Genetic perspectives on forager-farmer interaction in the Luangwa valley of Zambia.

Am J Phys Anthropol 2010 Mar;141(3):382-94

Max Planck Institute for Evolutionary Anthropology, Leipzig D-04103, Germany.

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http://dx.doi.org/10.1002/ajpa.21155DOI Listing
March 2010