Carol Bult

Carol Bult

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Mouse Genome Database (MGD) 2019.

Nucleic Acids Res 2019 Jan;47(D1):D801-D806

The Jackson Laboratory, 600 Main Street, Bar Harbor, ME 04609, USA.

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https://academic.oup.com/nar/advance-article/doi/10.1093/nar
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http://dx.doi.org/10.1093/nar/gky1056DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6323923PMC
January 2019

Mouse Genome Database (MGD)-2018: knowledgebase for the laboratory mouse.

Nucleic Acids Res 2018 01;46(D1):D836-D842

The Jackson Laboratory, 600 Main Street, Bar Harbor, ME 04609, USA.

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http://dx.doi.org/10.1093/nar/gkx1006DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5753350PMC
January 2018

Editorial overview: Characterizing the cancer genome: mechanistic insights and translational opportunities.

Curr Opin Genet Dev 2017 02 15;42:78-80. Epub 2017 Apr 15.

The Jackson Laboratory, 600 Main Street, Bar Harbor, ME 04609, USA. Electronic address:

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http://dx.doi.org/10.1016/j.gde.2017.04.001DOI Listing
February 2017

Mouse Genome Database (MGD)-2017: community knowledge resource for the laboratory mouse.

Nucleic Acids Res 2017 01 28;45(D1):D723-D729. Epub 2016 Nov 28.

The Jackson Laboratory, 600 Main Street, Bar Harbor, ME 04609, USA.

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http://dx.doi.org/10.1093/nar/gkw1040DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5210536PMC
January 2017

De novo frameshift mutation in COUP-TFII (NR2F2) in human congenital diaphragmatic hernia.

Am J Med Genet A 2016 09 1;170(9):2457-61. Epub 2016 Jul 1.

Pediatric Surgical Research Laboratories, Massachusetts General Hospital, Boston, Massachusetts.

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http://dx.doi.org/10.1002/ajmg.a.37830DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5003181PMC
September 2016

Patient-Derived Tumor Xenografts: Why Now?

JAMA Oncol 2016 May;2(5):567-568

The Jackson Laboratory, Bar Harbor, Maine.

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http://dx.doi.org/10.1001/jamaoncol.2016.0193DOI Listing
May 2016

Clinical Trials in Precision Oncology.

Clin Chem 2016 Mar 25;62(3):442-8. Epub 2015 Nov 25.

Dartmouth Hitchcock Medical Center and The Audrey and Theodor Geisel School of Medicine at Dartmouth, Lebanon, NH.

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http://dx.doi.org/10.1373/clinchem.2015.247437DOI Listing
March 2016

Mouse genome database 2016.

Nucleic Acids Res 2016 Jan 17;44(D1):D840-7. Epub 2015 Nov 17.

The Jackson Laboratory, 600 Main Street, Bar Harbor, ME 04609, USA.

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http://dx.doi.org/10.1093/nar/gkv1211DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4702860PMC
January 2016

A Patient-Derived Xenograft Model of Parameningeal Embryonal Rhabdomyosarcoma for Preclinical Studies.

Sarcoma 2015 30;2015:826124. Epub 2015 Nov 30.

Pediatric Cancer Biology Program, Papé Family Pediatric Research Institute, Oregon Health & Science University, 3181 S.W. Sam Jackson Park Road, Portland, OR 97239, USA ; Department of Pediatrics, Oregon Health & Science University, 3181 S.W. Sam Jackson Park Road, Portland, OR 97239, USA ; Children's Cancer Therapy Development Institute, Beaverton, OR 97005, USA.

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http://downloads.hindawi.com/journals/sarcoma/2015/826124.pd
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http://www.hindawi.com/journals/sarcoma/2015/826124/
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http://dx.doi.org/10.1155/2015/826124DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4677247PMC
December 2015

Visual annotation display (VLAD): a tool for finding functional themes in lists of genes.

Mamm Genome 2015 Oct 6;26(9-10):567-73. Epub 2015 Jun 6.

Mouse Genome Informatics (MGI) Database Consortium, The Jackson Laboratory, 600 Main Street, Bar Harbor, ME, 04609, USA.

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http://dx.doi.org/10.1007/s00335-015-9570-2DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4602057PMC
October 2015

Mouse Genome Informatics (MGI): reflecting on 25 years.

Mamm Genome 2015 Aug 4;26(7-8):272-84. Epub 2015 Aug 4.

Mouse Genome Informatics, The Jackson Laboratory, Bar Harbor, ME, 04609, USA,

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http://dx.doi.org/10.1007/s00335-015-9589-4DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4534491PMC
August 2015

Mouse Tumor Biology (MTB): a database of mouse models for human cancer.

Nucleic Acids Res 2015 Jan 20;43(Database issue):D818-24. Epub 2014 Oct 20.

The Jackson Laboratory, 600 Main Street, Bar Harbor, ME, USA.

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http://dx.doi.org/10.1093/nar/gku987DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4384039PMC
January 2015

Molecular pathogenesis of congenital diaphragmatic hernia revealed by exome sequencing, developmental data, and bioinformatics.

Proc Natl Acad Sci U S A 2014 Aug 8;111(34):12450-5. Epub 2014 Aug 8.

The Pediatric Surgical Research Laboratories, Massachusetts General Hospital, Boston, MA 02114; Department of Surgery, Harvard Medical School, Boston, MA 02115; Broad Institute, Cambridge, MA 02141;

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http://dx.doi.org/10.1073/pnas.1412509111DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4151769PMC
August 2014

Precise genetic mapping and integrative bioinformatics in Diversity Outbred mice reveals Hydin as a novel pain gene.

Mamm Genome 2014 Jun 5;25(5-6):211-22. Epub 2014 Apr 5.

IGERT Program in Functional Genomics, Graduate School of Biomedical Sciences and Engineering, The University of Maine, Orono, ME, 04469, USA,

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http://dx.doi.org/10.1007/s00335-014-9508-0DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4032469PMC
June 2014

Mouse phenome database.

Nucleic Acids Res 2014 Jan 15;42(Database issue):D825-34. Epub 2013 Nov 15.

The Jackson Laboratory, 600 Main Street, Bar Harbor, ME 04609 USA.

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http://dx.doi.org/10.1093/nar/gkt1159DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3965087PMC
January 2014

Protein Ontology: a controlled structured network of protein entities.

Nucleic Acids Res 2014 Jan 21;42(Database issue):D415-21. Epub 2013 Nov 21.

Protein Information Resource, Georgetown University Medical Center, WA 20007, USA, Center for Bioinformatics and Computational Biology, University of Delaware, Newark, DE 19711, USA, Department of Bioinformatics and Computational Biology, The Jackson Laboratory, Bar Harbor, ME 04609, USA, Department of Biochemistry and Molecular Pharmacology, NYU School of Medicine, NY 10016, USA, Department of Neurology, University at Buffalo School of Medicine and Biomedical Sciences, Buffalo, NY 14203, USA, Center of Excellence in Bioinformatics and Life Sciences, University at Buffalo, Buffalo, NY 14203, USA, Department of Immunology, Duke University Medical Center, Durham, NC 27705, USA and Department of Oral Diagnostic Sciences, University at Buffalo School of Dental Medicine, Buffalo, NY 14214, USA.

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http://dx.doi.org/10.1093/nar/gkt1173DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3964965PMC
January 2014

The Mouse Genome Database: integration of and access to knowledge about the laboratory mouse.

Nucleic Acids Res 2014 Jan 26;42(Database issue):D810-7. Epub 2013 Nov 26.

Bioinformatics and Computational Biology, The Jackson Laboratory, 600 Main Street, Bar Harbor, ME 04609, USA.

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http://dx.doi.org/10.1093/nar/gkt1225DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3964950PMC
January 2014

Bioinformatics resources for behavior studies in the laboratory mouse.

Authors:
Carol J Bult

Int Rev Neurobiol 2012 ;104:71-90

The Jackson Laboratory, Bar Harbor, Maine, USA.

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https://linkinghub.elsevier.com/retrieve/pii/B97801239832370
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http://dx.doi.org/10.1016/B978-0-12-398323-7.00004-5DOI Listing
May 2013

Tissue-specific functional networks for prioritizing phenotype and disease genes.

PLoS Comput Biol 2012 27;8(9):e1002694. Epub 2012 Sep 27.

Department of Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, Michigan, USA.

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https://dx.plos.org/10.1371/journal.pcbi.1002694
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http://dx.doi.org/10.1371/journal.pcbi.1002694DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3459891PMC
January 2013

The mouse genome database: genotypes, phenotypes, and models of human disease.

Nucleic Acids Res 2013 Jan 21;41(Database issue):D885-91. Epub 2012 Nov 21.

The Jackson Laboratory, 600 Main Street, Bar Harbor, ME 04609 USA.

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http://dx.doi.org/10.1093/nar/gks1115DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3531104PMC
January 2013

The mammalian gene function resource: the International Knockout Mouse Consortium.

Mamm Genome 2012 Oct 12;23(9-10):580-6. Epub 2012 Sep 12.

The Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1HH, UK.

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http://dx.doi.org/10.1007/s00335-012-9422-2DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3463800PMC
October 2012

Mouse Colony Data Management.

Curr Protoc Mouse Biol 2012 Sep 1;3(1):1-8. Epub 2012 Sep 1.

The Jackson Laboratory, Bar Harbor, Maine.

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http://dx.doi.org/10.1002/9780470942390.mo120123DOI Listing
September 2012

Congenital diaphragmatic hernia candidate genes derived from embryonic transcriptomes.

Proc Natl Acad Sci U S A 2012 Feb 6;109(8):2978-83. Epub 2012 Feb 6.

Pediatric Surgical Research Laboratories, Massachusetts General Hospital, Boston, MA 02114, USA.

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http://dx.doi.org/10.1073/pnas.1121621109DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3286948PMC
February 2012

The Mouse Genome Database (MGD): comprehensive resource for genetics and genomics of the laboratory mouse.

Nucleic Acids Res 2012 Jan 10;40(Database issue):D881-6. Epub 2011 Nov 10.

The Jackson Laboratory, Bar Harbor, ME 04609, USA.

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http://dx.doi.org/10.1093/nar/gkr974DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3245042PMC
January 2012

Mouse Phenome Database (MPD).

Nucleic Acids Res 2012 Jan 18;40(Database issue):D887-94. Epub 2011 Nov 18.

The Jackson Laboratory, 600 Main Street, Bar Harbor, ME 04609, USA.

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http://dx.doi.org/10.1093/nar/gkr1061DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3245053PMC
January 2012

Autism candidate genes via mouse phenomics.

J Biomed Inform 2011 Dec 21;44 Suppl 1:S5-11. Epub 2011 Mar 21.

The Jackson Laboratory, 600 Main St., Bar Harbor, ME 04609, USA.

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http://dx.doi.org/10.1016/j.jbi.2011.03.003DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3263820PMC
December 2011

The Mouse Genome Database (MGD): premier model organism resource for mammalian genomics and genetics.

Nucleic Acids Res 2011 Jan 3;39(Database issue):D842-8. Epub 2010 Nov 3.

The Jackson Laboratory, Bar Harbor, ME 04609, USA.

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http://dx.doi.org/10.1093/nar/gkq1008DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3013640PMC
January 2011

Expression of the transcription factor, TFII-I, during post-implantation mouse embryonic development.

BMC Res Notes 2010 Jul 20;3:203. Epub 2010 Jul 20.

Johns Hopkins University School of Medicine, Department of Medicine, Cardiopulmonary and Critical Care Division, 1830 E, Monument Street, Baltimore, MD 21205, USA.

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http://bmcresnotes.biomedcentral.com/articles/10.1186/1756-0
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http://dx.doi.org/10.1186/1756-0500-3-203DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2921380PMC
July 2010

JAX Colony Management System (JCMS): an extensible colony and phenotype data management system.

Mamm Genome 2010 Apr 7;21(3-4):205-15. Epub 2010 Feb 7.

The Jackson Laboratory, 610 Main Street, Bar Harbor, ME 04609, USA.

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http://dx.doi.org/10.1007/s00335-010-9250-1DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2844967PMC
April 2010

The Mouse Genome Database: enhancements and updates.

Nucleic Acids Res 2010 Jan 27;38(Database issue):D586-92. Epub 2009 Oct 27.

The Jackson Laboratory, 600 Main Street, Bar Harbor, ME 04609 USA.

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http://dx.doi.org/10.1093/nar/gkp880DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2808942PMC
January 2010

MouseCyc: a curated biochemical pathways database for the laboratory mouse.

Genome Biol 2009 14;10(8):R84. Epub 2009 Aug 14.

The Jackson Laboratory, Bar Harbor, ME 04609, USA.

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http://dx.doi.org/10.1186/gb-2009-10-8-r84DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2745765PMC
October 2009

The Mouse Genome Database genotypes::phenotypes.

Nucleic Acids Res 2009 Jan 3;37(Database issue):D712-9. Epub 2008 Nov 3.

The Jackson Laboratory, 600 Main Street, Bar Harbor, ME 04609, USA.

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http://dx.doi.org/10.1093/nar/gkn886DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2686566PMC
January 2009

Mouse phenome database.

Nucleic Acids Res 2009 Jan 5;37(Database issue):D720-30. Epub 2008 Nov 5.

The Jackson Laboratory, 600 Main Street, Bar Harbor, ME 04609, USA.

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http://dx.doi.org/10.1093/nar/gkn778DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2686531PMC
January 2009

Analysis of gene expression in a developmental context emphasizes distinct biological leitmotifs in human cancers.

Genome Biol 2008 8;9(7):R108. Epub 2008 Jul 8.

Children's Hospital Informatics Program, Harvard-MIT Division of Health Sciences and Technology, Longwood Avenue, Boston, MA 02115, USA.

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http://dx.doi.org/10.1186/gb-2008-9-7-r108DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2530866PMC
October 2008

A genomewide functional network for the laboratory mouse.

PLoS Comput Biol 2008 Sep 26;4(9):e1000165. Epub 2008 Sep 26.

Lewis-Sigler Institute for Integrative Genomics, Carl Icahn Laboratory, Princeton University, Princeton, New Jersey, United States of America.

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http://dx.doi.org/10.1371/journal.pcbi.1000165DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2527685PMC
September 2008

The Mouse Tumor Biology database.

Nat Rev Cancer 2008 06 24;8(6):459-65. Epub 2008 Apr 24.

Jackson Laboratory, Mouse Tumour Biology Database, 600 Main Street, Bar Harbor, Maine 04609, USA.

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http://dx.doi.org/10.1038/nrc2390DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2574871PMC
June 2008

The Mouse Genome Database (MGD): mouse biology and model systems.

Nucleic Acids Res 2008 Jan 23;36(Database issue):D724-8. Epub 2007 Dec 23.

The Jackson Laboratory, 600 Main Street, Bar Harbor, ME 04609, USA.

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http://nar.oxfordjournals.org/content/36/suppl_1/D724.full.p
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http://nar.oxfordjournals.org/lookup/doi/10.1093/nar/gkm961
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http://dx.doi.org/10.1093/nar/gkm961DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2238849PMC
January 2008

A mouse model of conditional lipodystrophy.

Proc Natl Acad Sci U S A 2007 Oct 5;104(42):16627-32. Epub 2007 Oct 5.

The Jackson Laboratory, 600 Main Street, Bar Harbor, ME 04609, USA.

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http://dx.doi.org/10.1073/pnas.0707797104DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2034232PMC
October 2007

Discrimination of non-protein-coding transcripts from protein-coding mRNA.

RNA Biol 2006 Jan-Mar;3(1):40-8. Epub 2006 Apr 3.

Genome Exploration Research Group (Genome Network Project Core Group), RIKEN Genomic Sciences Center (GSC), RIKEN Yokohama Institute, Kanagawa, Japan.

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http://dx.doi.org/10.4161/rna.3.1.2789DOI Listing
September 2007

Mouse genome informatics (MGI) resources for pathology and toxicology.

Toxicol Pathol 2007 Apr;35(3):456-7

The Jackson Laboratory, Bar Harbor, ME 04609, USA.

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http://dx.doi.org/10.1080/01926230701310536DOI Listing
April 2007

Transcriptional profile of mouse pre-granulosa and Sertoli cells isolated from early-differentiated fetal gonads.

Gene Expr Patterns 2007 Jan 6;7(1-2):113-23. Epub 2006 Jun 6.

The Jackson Laboratory, 600 Main Street, Bar Harbor, ME 04609, USA.

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http://linkinghub.elsevier.com/retrieve/pii/S1567133X0600105
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http://dx.doi.org/10.1016/j.modgep.2006.05.011DOI Listing
January 2007

The mouse genome database (MGD): new features facilitating a model system.

Nucleic Acids Res 2007 Jan 29;35(Database issue):D630-7. Epub 2006 Nov 29.

The Jackson Laboratory 600 Main Street, Bar Harbor, ME 04609, USA.

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http://dx.doi.org/10.1093/nar/gkl940DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1751527PMC
January 2007

Mouse Phenome Database (MPD).

Nucleic Acids Res 2007 Jan 6;35(Database issue):D643-9. Epub 2006 Dec 6.

The Jackson Laboratory, 600 Main Street, Bar Harbor, ME 04609, USA.

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http://dx.doi.org/10.1093/nar/gkl1049DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1781116PMC
January 2007

The mouse as a model for human biology: a resource guide for complex trait analysis.

Nat Rev Genet 2007 Jan;8(1):58-69

The Jackson Laboratory, 600 Main Street, Bar Harbor, Maine 04609, USA.

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http://www.nature.com/articles/nrg2025
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http://dx.doi.org/10.1038/nrg2025DOI Listing
January 2007

Genomes as geography: using GIS technology to build interactive genome feature maps.

BMC Bioinformatics 2006 Sep 19;7:416. Epub 2006 Sep 19.

National Center for Geographic Information and Analysis, University of Maine, Orono, ME 04469, USA.

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http://dx.doi.org/10.1186/1471-2105-7-416DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1599760PMC
September 2006

Beyond the data deluge: data integration and bio-ontologies.

J Biomed Inform 2006 Jun 21;39(3):314-20. Epub 2006 Feb 21.

The Jackson Laboratory, Bar Harbor, ME, USA.

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http://linkinghub.elsevier.com/retrieve/pii/S153204640600019
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http://dx.doi.org/10.1016/j.jbi.2006.01.003DOI Listing
June 2006

Clusters of internally primed transcripts reveal novel long noncoding RNAs.

PLoS Genet 2006 Apr 28;2(4):e37. Epub 2006 Apr 28.

Mouse Genome Informatics Consortium, The Jackson Laboratory, Bar Harbor, Maine, United States of America.

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http://dx.doi.org/10.1371/journal.pgen.0020037DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1449886PMC
April 2006

The Mouse Genome Database (MGD): updates and enhancements.

Nucleic Acids Res 2006 Jan;34(Database issue):D562-7

The Jackson Laboratory, 600 Main Street, Bar Harbor, ME 04609, USA.

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http://dx.doi.org/10.1093/nar/gkj085DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1347448PMC
January 2006

Large-scale mutagenesis of the mouse to understand the genetic bases of nervous system structure and function.

Brain Res Mol Brain Res 2004 Dec;132(2):105-15

Dept. Anatomy and Neurobiology, University of Tennessee Health Science Center, 855 Monroe Ave., Memphis, TN 38163, United States.

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http://dx.doi.org/10.1016/j.molbrainres.2004.09.016DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3773686PMC
December 2004

Mice and more.

Authors:
Carol J Bult

Genome Biol 2003 19;4(10):340. Epub 2003 Sep 19.

The Jackson Laboratory, Bar Harbor, ME 04609, USA.

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http://genomebiology.biomedcentral.com/articles/10.1186/gb-2
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http://dx.doi.org/10.1186/gb-2003-4-10-340DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC328447PMC
August 2004

Development and evaluation of an automated annotation pipeline and cDNA annotation system.

Genome Res 2003 Jun;13(6B):1542-51

Laboratory for Genome Exploration Research Group, RIKEN Genomic Sciences Center (GSC), RIKEN Yokohama Institute, Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan.

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http://dx.doi.org/10.1101/gr.992803DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC403710PMC
June 2003