Publications by authors named "Cankun Wang"

13Publications

Deep forest ensemble learning for classification of alignments of non-coding RNA sequences based on multi-view structure representations.

Brief Bioinform 2020 Dec 23. Epub 2020 Dec 23.

College of Computer Science and Technology, Jilin University, Changchun, China.

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December 2020

scREAD: A Single-Cell RNA-Seq Database for Alzheimer's Disease.

iScience 2020 Nov 5;23(11):101769. Epub 2020 Nov 5.

Department of Biomedical Informatics, The Ohio State University, Columbus, OH 43210, USA.

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November 2020

IRIS3: integrated cell-type-specific regulon inference server from single-cell RNA-Seq.

Nucleic Acids Res 2020 07;48(W1):W275-W286

Department of Biomedical Informatics, College of Medicine, The Ohio State University, Columbus, OH 43210, USA.

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July 2020

CirRNAPL: A web server for the identification of circRNA based on extreme learning machine.

Comput Struct Biotechnol J 2020 2;18:834-842. Epub 2020 Apr 2.

Department of Biomedical Informatics, Ohio State University, Columbus, OH, USA.

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April 2020

Water Deficit Transcriptomic Responses Differ in the Invasive and Established in the Southern and Northern United States.

Plants (Basel) 2020 Jan 9;9(1). Epub 2020 Jan 9.

Agronomy, Horticulture and Plant Science, South Dakota State University, Brookings, SD 57007, USA.

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January 2020

QUBIC2: a novel and robust biclustering algorithm for analyses and interpretation of large-scale RNA-Seq data.

Bioinformatics 2020 02;36(4):1143-1149

Department of Biomedical Informatics, College of Medicine, The Ohio State University, Columbus, OH 43210, USA.

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February 2020

Prediction of regulatory motifs from human Chip-sequencing data using a deep learning framework.

Nucleic Acids Res 2019 09;47(15):7809-7824

Department of Biomedical Informatics, College of Medicine, The Ohio State University, Columbus, OH 43210, USA.

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September 2019

Improved Draft Genome Sequence of Pseudomonas poae A2-S9, a Strain with Plant Growth-Promoting Activity.

Microbiol Resour Announc 2019 Apr 11;8(15). Epub 2019 Apr 11.

Department of Energy Joint Genome Institute, Walnut Creek, California, USA.

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April 2019

Improved Draft Genome Sequence of sp. Strain YF23, Which Has Plant Growth-Promoting Activity.

Microbiol Resour Announc 2019 Apr 11;8(15). Epub 2019 Apr 11.

Department of Energy Joint Genome Institute, Walnut Creek, California, USA.

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April 2019

Using Machine Learning to Measure Relatedness Between Genes: A Multi-Features Model.

Sci Rep 2019 03 12;9(1):4192. Epub 2019 Mar 12.

Bioinformatics and Mathematical Biosciences Lab, Department of Agronomy, Horticulture, and Plant Science, Department of Mathematics and Statistics, South Dakota State University, Brookings, SD, 57006, USA.

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March 2019

IRIS-EDA: An integrated RNA-Seq interpretation system for gene expression data analysis.

PLoS Comput Biol 2019 02 14;15(2):e1006792. Epub 2019 Feb 14.

Department of Agronomy, Horticulture, and Plant Science, BioSNTR, South Dakota State University, Brookings, SD, United States of America.

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February 2019

A New Machine Learning-Based Framework for Mapping Uncertainty Analysis in RNA-Seq Read Alignment and Gene Expression Estimation.

Front Genet 2018 14;9:313. Epub 2018 Aug 14.

Bioinformatics and Mathematical Biosciences Lab, Department of Agronomy, Horticulture, and Plant Science, South Dakota State University, Brookings, SD, United States.

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August 2018

LncFinder: an integrated platform for long non-coding RNA identification utilizing sequence intrinsic composition, structural information and physicochemical property.

Brief Bioinform 2019 11;20(6):2009-2027

College of Computer Science and Technology, Key Laboratory of Symbol Computation and Knowledge Engineering of Ministry of Education, Jilin University, Changchun, China.

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November 2019