Camille Laibe

Camille Laibe

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Camille Laibe

Camille Laibe

Publications by authors named "Camille Laibe"

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Tools and data services registry: a community effort to document bioinformatics resources.

Nucleic Acids Res 2016 Jan 3;44(D1):D38-47. Epub 2015 Nov 3.

Center for Biological Sequence Analysis Department of Systems Biology, Technical University of Denmark, Denmark Novo Nordisk Foundation Center for Protein Research, Faculty of Health and Medical Sciences, University of Copenhagen, Denmark.

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http://dx.doi.org/10.1093/nar/gkv1116DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4702812PMC
January 2016

SPARQL-enabled identifier conversion with Identifiers.org.

Bioinformatics 2015 Jun 31;31(11):1875-7. Epub 2015 Jan 31.

European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK, Swiss-Prot group, Swiss Institute of Bioinformatics, Centre Medical Universitaire, 1211 Geneve, Switzerland, Database Center for Life Science (DCLS), Research Organization of Information and Systems, 178-4-4 Wakashiba, Kashiwa, Chiba 277-0871, Japan, Stanford Center for Biomedical Informatics Research, Stanford University, CA 94305-5479, USA and Babraham Institute, Babraham Research Campus, Cambridge, CB22 3AT, UK.

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http://dx.doi.org/10.1093/bioinformatics/btv064DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4443684PMC
June 2015

BioModels: ten-year anniversary.

Nucleic Acids Res 2015 Jan 20;43(Database issue):D542-8. Epub 2014 Nov 20.

European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK.

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http://dx.doi.org/10.1093/nar/gku1181DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4383975PMC
January 2015

BioModels linked dataset.

BMC Syst Biol 2014 Aug 15;8:91. Epub 2014 Aug 15.

European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, UK.

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http://dx.doi.org/10.1186/s12918-014-0091-5DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4423647PMC
August 2014

The EBI RDF platform: linked open data for the life sciences.

Bioinformatics 2014 May 11;30(9):1338-9. Epub 2014 Jan 11.

European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK and SIB Swiss Institute of Bioinformatics, Centre Medical Universitaire, 1211 Geneve, Switzerland.

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http://dx.doi.org/10.1093/bioinformatics/btt765DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3998127PMC
May 2014

BioHackathon series in 2011 and 2012: penetration of ontology and linked data in life science domains.

J Biomed Semantics 2014 Feb 5;5(1). Epub 2014 Feb 5.

Database Center for Life Science, Research Organization of Information and Systems, 2-11-16, Yayoi, Bunkyo-ku, Tokyo 113-0032, Japan.

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http://dx.doi.org/10.1186/2041-1480-5-5DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3978116PMC
February 2014

BioModels Database: a repository of mathematical models of biological processes.

Methods Mol Biol 2013 ;1021:189-99

EMBL Outstation-European Bioinformatics Institute, Cambridge, UK.

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http://dx.doi.org/10.1007/978-1-62703-450-0_10DOI Listing
December 2013

Controlled annotations for systems biology.

Methods Mol Biol 2013 ;1021:227-45

The EMBL-European Bioinformatics Institute, Wellcome Trust Genome Campus Hinxton, Cambridge, UK.

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http://dx.doi.org/10.1007/978-1-62703-450-0_12DOI Listing
December 2013

Towards the collaborative curation of the registry underlying Identifiers.org.

Database (Oxford) 2013 12;2013:bat017. Epub 2013 Apr 12.

Proteomics Services, European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK.

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http://dx.doi.org/10.1093/database/bat017DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3625955PMC
June 2013

LibKiSAO: a Java library for Querying KiSAO.

BMC Res Notes 2012 Sep 24;5:520. Epub 2012 Sep 24.

EMBL-EBI, Wellcome Trust Genome Campus, Hinxton, CB10 1SD, United Kingdom.

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http://dx.doi.org/10.1186/1756-0500-5-520DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3532180PMC
September 2012

Identifiers.org and MIRIAM Registry: community resources to provide persistent identification.

Nucleic Acids Res 2012 Jan 2;40(Database issue):D580-6. Epub 2011 Dec 2.

European Bioinformatics Institute, Hinxton, Cambridge CB10 1SD, UK.

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http://dx.doi.org/10.1093/nar/gkr1097DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3245029PMC
January 2012

BioModels.net Web Services, a free and integrated toolkit for computational modelling software.

Brief Bioinform 2010 May 25;11(3):270-7. Epub 2009 Nov 25.

Computational Neurobiology Group, at the European Bioinformatics Institute, Hinxton, UK.

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http://dx.doi.org/10.1093/bib/bbp056DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2913671PMC
May 2010

Designing and encoding models for synthetic biology.

J R Soc Interface 2009 Aug 1;6 Suppl 4:S405-17. Epub 2009 Apr 1.

EMBL-European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK.

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http://dx.doi.org/10.1098/rsif.2009.0035.focusDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2843962PMC
August 2009

MIRIAM Resources: tools to generate and resolve robust cross-references in Systems Biology.

BMC Syst Biol 2007 Dec 13;1:58. Epub 2007 Dec 13.

European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK.

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http://bmcsystbiol.biomedcentral.com/articles/10.1186/1752-0
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http://dx.doi.org/10.1186/1752-0509-1-58DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2259379PMC
December 2007