Caifu Chen

Caifu Chen

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Caifu Chen

Caifu Chen

Publications by authors named "Caifu Chen"

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34Publications

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Deficiency of microRNA expands cell fate potential in pluripotent stem cells.

Science 2017 02 12;355(6325). Epub 2017 Jan 12.

Division of Cellular and Developmental Biology, Department of Molecular and Cell Biology, University of California, Berkeley, CA 94705, USA.

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http://dx.doi.org/10.1126/science.aag1927DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6138252PMC
February 2017

A genome-wide RNAi screen draws a genetic framework for transposon control and primary piRNA biogenesis in Drosophila.

Mol Cell 2013 Jun 9;50(5):736-48. Epub 2013 May 9.

Watson School of Biological Sciences, Howard Hughes Medical Institute, Cold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA.

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https://linkinghub.elsevier.com/retrieve/pii/S10972765130028
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http://dx.doi.org/10.1016/j.molcel.2013.04.006DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3724422PMC
June 2013

Stem-loop RT-qPCR for microRNA expression profiling.

Methods Mol Biol 2012 ;822:33-52

Life Technologies Corporation, Foster City, CA, USA.

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http://dx.doi.org/10.1007/978-1-61779-427-8_3DOI Listing
April 2012

The microRNA body map: dissecting microRNA function through integrative genomics.

Nucleic Acids Res 2011 Nov 10;39(20):e136. Epub 2011 Aug 10.

Center for Medical Genetics, Ghent University Hospital, Ghent, Belgium and Life Technologies, Foster City, CA, USA.

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http://dx.doi.org/10.1093/nar/gkr646DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3203610PMC
November 2011

miR-34 miRNAs provide a barrier for somatic cell reprogramming.

Nat Cell Biol 2011 Oct 23;13(11):1353-60. Epub 2011 Oct 23.

Division of Cellular and Developmental Biology, Molecular and Cell Biology Department, University of California at Berkeley, Berkeley, California 94705, USA.

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http://dx.doi.org/10.1038/ncb2366DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3541684PMC
October 2011

MicroRNA regulation of molecular networks mapped by global microRNA, mRNA, and protein expression in activated T lymphocytes.

J Immunol 2011 Sep 25;187(5):2233-43. Epub 2011 Jul 25.

Department of Molecular and Experimental Medicine, The Scripps Research Institute, La Jolla, CA 92037, USA.

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http://dx.doi.org/10.4049/jimmunol.1101233DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3159804PMC
September 2011

MicroRNA characterize genetic diversity and drug resistance in pediatric acute lymphoblastic leukemia.

Haematologica 2011 May 17;96(5):703-11. Epub 2011 Jan 17.

Erasmus MC-Sophia Children's Hospital, Dept. of Pediatric Oncology and Hematology, room Sp2456 P.O. Box 2060, 3000 CB Rotterdam, the Netherlands.

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http://dx.doi.org/10.3324/haematol.2010.026138DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3084917PMC
May 2011

Quantitation of microRNAs by real-time RT-qPCR.

Methods Mol Biol 2011 ;687:113-34

Genomic Assays R&D, Molecular Biology Systems Division, Life Technologies, Foster City, CA, USA.

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http://dx.doi.org/10.1007/978-1-60761-944-4_8DOI Listing
February 2011

Asynchronous PCR.

Methods Mol Biol 2011 ;687:231-43

Genomic Assays R&D, Molecular Biology Systems Division, Life Technologies, Foster City, CA, USA.

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http://dx.doi.org/10.1007/978-1-60761-944-4_16DOI Listing
February 2011

Probing the initiation and effector phases of the somatic piRNA pathway in Drosophila.

Genes Dev 2010 Nov 21;24(22):2499-504. Epub 2010 Oct 21.

Watson School of Biological Sciences, Howard Hughes Medical Institute, Cold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA.

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http://genesdev.cshlp.org/cgi/doi/10.1101/gad.1968110
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http://dx.doi.org/10.1101/gad.1968110DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2975926PMC
November 2010

Gene expression in stem cells.

Crit Rev Eukaryot Gene Expr 2009 ;19(4):289-300

Molecular Biology Systems Division, Life Technologies, Foster City, CA 94404, USA.

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http://dx.doi.org/10.1615/critreveukargeneexpr.v19.i4.30DOI Listing
December 2009

Stem-loop RT-PCR quantification of siRNAs in vitro and in vivo.

Oligonucleotides 2009 Jun;19(2):203-8

Life Technologies, Austin, TX 78744, USA.

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http://dx.doi.org/10.1089/oli.2008.0176DOI Listing
June 2009

MicroRNA and stem cell regulation.

Curr Opin Mol Ther 2009 Jun;11(3):292-8

Life Technologies, Molecular Biology Systems Division, Foster City, CA 94404, USA.

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June 2009

MicroRNAs in embryonic stem cells.

J Cell Physiol 2009 Feb;218(2):251-5

Gene Expression and Genotyping Assays R&D, Molecular Cell Biology Division, Applied Biosystems, Foster City, California, USA.

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http://dx.doi.org/10.1002/jcp.21607DOI Listing
February 2009

High-throughput stem-loop RT-qPCR miRNA expression profiling using minute amounts of input RNA.

Nucleic Acids Res 2008 Dec 21;36(21):e143. Epub 2008 Oct 21.

Center for Medical Genetics, Ghent University Hospital, Ghent, Belgium.

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http://dx.doi.org/10.1093/nar/gkn725DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2588502PMC
December 2008

Recurrent rearrangements of chromosome 1q21.1 and variable pediatric phenotypes.

N Engl J Med 2008 Oct 10;359(16):1685-99. Epub 2008 Sep 10.

University of Washington School of Medicine, Seattle 98195, USA.

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http://dx.doi.org/10.1056/NEJMoa0805384DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2703742PMC
October 2008

Integrative genomic and functional analyses reveal neuronal subtype differentiation bias in human embryonic stem cell lines.

Proc Natl Acad Sci U S A 2007 Aug 10;104(34):13821-6. Epub 2007 Aug 10.

Mental Retardation Research Center, David Geffen School of Medicine at University of California, Los Angeles, Neuroscience Research Building Room 351, 635 Charles E. Young Drive South, Los Angeles, CA 90095, USA.

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http://dx.doi.org/10.1073/pnas.0706199104DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1959466PMC
August 2007

A microRNA component of the p53 tumour suppressor network.

Nature 2007 Jun 6;447(7148):1130-4. Epub 2007 Jun 6.

Watson School of Biological Sciences, Howard Hughes Medical Institute, Cold Spring Harbor Laboratory, 1 Bungtown Road, Cold Spring Harbor, New York 11724, USA.

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http://dx.doi.org/10.1038/nature05939DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4590999PMC
June 2007

Characterization of microRNA expression profiles in normal human tissues.

BMC Genomics 2007 Jun 12;8:166. Epub 2007 Jun 12.

Molecular and Cell Biology-R&D, Applied Biosystems, Foster City, CA 94404, USA.

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https://www.umassmed.edu/uploadedFiles/Ambros_Lab/2007_Gaur_
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http://www.biomedcentral.com/1471-2164/8/166
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http://dx.doi.org/10.1186/1471-2164-8-166DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1904203PMC
June 2007

Defining embryonic stem cell identity using differentiation-related microRNAs and their potential targets.

Mamm Genome 2007 May 3;18(5):316-27. Epub 2007 Jul 3.

R&D, Applied Biosystems, Foster City, California 94404, USA.

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http://link.springer.com/10.1007/s00335-007-9032-6
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http://dx.doi.org/10.1007/s00335-007-9032-6DOI Listing
May 2007

Characterization of microRNA expression levels and their biological correlates in human cancer cell lines.

Cancer Res 2007 Mar;67(6):2456-68

Norris Cotton Cancer Center, Dartmouth Medical School, Lebanon, New Hampshire 03755, USA.

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http://dx.doi.org/10.1158/0008-5472.CAN-06-2698DOI Listing
March 2007

Nonrestrictive developmental regulation of microRNA gene expression.

Mamm Genome 2006 Aug 4;17(8):833-40. Epub 2006 Aug 4.

MCD Biology, University of Colorado, Boulder, Colorado, 80309, USA,

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http://link.springer.com/10.1007/s00335-006-0025-7
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http://dx.doi.org/10.1007/s00335-006-0025-7DOI Listing
August 2006

Multiplexing RT-PCR for the detection of multiple miRNA species in small samples.

Biochem Biophys Res Commun 2006 Apr 28;343(1):85-9. Epub 2006 Feb 28.

Applied Biosystems, 850 Lincoln Centre Dr., Foster City, CA 94404, USA.

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http://dx.doi.org/10.1016/j.bbrc.2006.02.106DOI Listing
April 2006