Publications Authored by Brunilda Balliu

Genetic regulation of gene expression and splicing during a 10-year period of human aging.

Authors:

Brunilda Balliu Matthew Durrant Olivia de Goede Nathan Abell Xin Li Boxiang Liu Michael J Gloudemans Naomi L Cook Kevin S Smith David A Knowles Mauro Pala Francesco Cucca David Schlessinger Siddhartha Jaiswal Chiara Sabatti Lars Lind Erik Ingelsson Stephen B Montgomery

Genome Biol 2019 11 4;20(1):230. Epub 2019 Nov 4.

Department of Pathology, Stanford University School of Medicine, Stanford, USA.

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http://dx.doi.org/10.1186/s13059-019-1840-y	DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6827221	PMC

November 2019

Identification of rare-disease genes using blood transcriptome sequencing and large control cohorts.

Nat Med 2019 06 3;25(6):911-919. Epub 2019 Jun 3.

Department of Pathology, School of Medicine, Stanford University, Stanford, CA, USA.

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http://dx.doi.org/10.1038/s41591-019-0457-8	DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6634302	PMC

June 2019

Powerful testing via hierarchical linkage disequilibrium in haplotype association studies.

Authors:

Brunilda Balliu Jeanine J Houwing-Duistermaat Stefan Böhringer

Biom J 2019 05 28;61(3):747-768. Epub 2019 Jan 28.

Department of Biomedical Data Sciences, Section Medical Statistics and Bioinformatics, Leiden University Medical Center, Leiden, The Netherlands.

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http://doi.wiley.com/10.1002/bimj.201800053	Publisher Site
http://dx.doi.org/10.1002/bimj.201800053	DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6637384	PMC

May 2019

Genetic analyses of human fetal retinal pigment epithelium gene expression suggest ocular disease mechanisms.

Authors:

Boxiang Liu Melissa A Calton Nathan S Abell Gillie Benchorin Michael J Gloudemans Ming Chen Jane Hu Xin Li Brunilda Balliu Dean Bok Stephen B Montgomery Douglas Vollrath

Commun Biol 2019 20;2:186. Epub 2019 May 20.

2Department of Genetics, Stanford University School of Medicine, Stanford, CA 94305 USA.

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http://dx.doi.org/10.1038/s42003-019-0430-6	DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6527609	PMC

May 2019

Distinctive facial features in idiopathic Moyamoya disease in Caucasians: a first systematic analysis.

Authors:

Markus Kraemer Quoc Bao Huynh Dagmar Wieczorek Brunilda Balliu Barbara Mikat Stefan Boehringer

PeerJ 2018 27;6:e4740. Epub 2018 Jun 27.

Biomedical Data Sciences, Leiden University Medical Center, Leiden, The Nederlands.

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http://dx.doi.org/10.7717/peerj.4740	DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6029584	PMC

June 2018

Shared genetic origin of asthma, hay fever and eczema elucidates allergic disease biology.

Authors:

Manuel A Ferreira Judith M Vonk Hansjörg Baurecht Ingo Marenholz Chao Tian Joshua D Hoffman Quinta Helmer Annika Tillander Vilhelmina Ullemar Jenny van Dongen Yi Lu Franz Rüschendorf Jorge Esparza-Gordillo Chris W Medway Edward Mountjoy Kimberley Burrows Oliver Hummel Sarah Grosche Ben M Brumpton John S Witte Jouke-Jan Hottenga Gonneke Willemsen Jie Zheng Elke Rodríguez Melanie Hotze Andre Franke Joana A Revez Jonathan Beesley Melanie C Matheson Shyamali C Dharmage Lisa M Bain Lars G Fritsche Maiken E Gabrielsen Brunilda Balliu Jonas B Nielsen Wei Zhou Kristian Hveem Arnulf Langhammer Oddgeir L Holmen Mari Løset Gonçalo R Abecasis Cristen J Willer Andreas Arnold Georg Homuth Carsten O Schmidt Philip J Thompson Nicholas G Martin David L Duffy Natalija Novak Holger Schulz Stefan Karrasch Christian Gieger Konstantin Strauch Ronald B Melles David A Hinds Norbert Hübner Stephan Weidinger Patrik K E Magnusson Rick Jansen Eric Jorgenson Young-Ae Lee Dorret I Boomsma Catarina Almqvist Robert Karlsson Gerard H Koppelman Lavinia Paternoster

Nat Genet 2017 Dec 30;49(12):1752-1757. Epub 2017 Oct 30.

MRC Integrative Epidemiology Unit, School of Social and Community Medicine, University of Bristol, Bristol, UK.

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http://dx.doi.org/10.1038/ng.3985	DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5989923	PMC

December 2017

Gene coexpression network analysis for family studies based on a meta-analytic approach.

Authors:

Renaud Tissier Hae-Won Uh Erik van den Akker Brunilda Balliu Spyridoula Tsonaka Jeanine Houwing-Duistermaat

BMC Proc 2016 18;10(Suppl 7):119-123. Epub 2016 Oct 18.

Department of Medical Statistics and Bioinformatics, Leiden University Medical Center, PO Box 9600, 2300 RC Leiden, The Netherlands ; Department of Statistics, University of Leeds, Leeds, UK.

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http://dx.doi.org/10.1186/s12919-016-0016-y	DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5133496	PMC

October 2016

Impact of the X Chromosome and sex on regulatory variation.

Authors:

Kimberly R Kukurba Princy Parsana Brunilda Balliu Kevin S Smith Zachary Zappala David A Knowles Marie-Julie Favé Joe R Davis Xin Li Xiaowei Zhu James B Potash Myrna M Weissman Jianxin Shi Anshul Kundaje Douglas F Levinson Philip Awadalla Sara Mostafavi Alexis Battle Stephen B Montgomery

Genome Res 2016 06 21;26(6):768-77. Epub 2016 Apr 21.

Department of Pathology, Stanford University School of Medicine, Stanford, California 94305, USA; Department of Genetics, Stanford University School of Medicine, Stanford, California 94305, USA; Department of Computer Science, Stanford University, Stanford, California 94305, USA;

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http://dx.doi.org/10.1101/gr.197897.115	DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4889977	PMC

June 2016

A Novel Test for Detecting SNP-SNP Interactions in Case-Only Trio Studies.

Authors:

Brunilda Balliu Noah Zaitlen

Genetics 2016 Apr 10;202(4):1289-97. Epub 2016 Feb 10.

Department of Medicine, University of California, San Francisco, California 94158.

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http://dx.doi.org/10.1534/genetics.115.179846	DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4905548	PMC

April 2016

Classification and visualization based on derived image features: application to genetic syndromes.

Authors:

Brunilda Balliu Rolf P Würtz Bernhard Horsthemke Dagmar Wieczorek Stefan Böhringer

PLoS One 2014 18;9(11):e109033. Epub 2014 Nov 18.

Medical Statistics and Bioinformatics, Leiden University Medical Center, Leiden, The Netherlands.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0109033	PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4236018	PMC

July 2015

A retrospective likelihood approach for efficient integration of multiple omics factors in case-control association studies.

Authors:

Brunilda Balliu Roula Tsonaka Stefan Boehringer Jeanine Houwing-Duistermaat

Genet Epidemiol 2015 Mar 24;39(3):156-65. Epub 2015 Jan 24.

Department of Medical Statistics and Bioinformatics, Leiden University Medical Center, The Netherlands.

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http://dx.doi.org/10.1002/gepi.21884	DOI Listing

March 2015

Combining information from linkage and association mapping for next-generation sequencing longitudinal family data.

Authors:

Brunilda Balliu Hae-Won Uh Roula Tsonaka Stefan Boehringer Quinta Helmer Jeanine J Houwing-Duistermaat

BMC Proc 2014 17;8(Suppl 1 Genetic Analysis Workshop 18Vanessa Olmo):S34. Epub 2014 Jun 17.

Department of Medical Statistics and Bioinformatics, Leiden University Medical Center, Einthovenweg 20, 2333 ZC Leiden, The Netherlands.

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http://bmcproc.biomedcentral.com/articles/10.1186/1753-6561-	Publisher Site
http://dx.doi.org/10.1186/1753-6561-8-S1-S34	DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4143620	PMC