Publications by authors named "Bruce J Aronow"

100Publications

Author Correction: Single-cell analysis of mixed-lineage states leading to a binary cell fate choice.

Nature 2019 May;569(7755):E3

Division of Immunobiology and Center for Systems Immunology, Cincinnati Children's Hospital Medical Center, Cincinnati, Ohio, 45229, USA.

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http://dx.doi.org/10.1038/s41586-019-1107-5DOI Listing
May 2019

Single-Cell Transcriptomics Uncovers Glial Progenitor Diversity and Cell Fate Determinants during Development and Gliomagenesis.

Cell Stem Cell 2019 05 11;24(5):707-723.e8. Epub 2019 Apr 11.

Department of Pediatrics, Brain Tumor Center, Division of Experimental Hematology and Cancer Biology, Cincinnati Children's Hospital Medical Center, Cincinnati, OH 45229, USA; Key Laboratory of Birth Defects, Children's Hospital of Fudan University, Shanghai 201102, China. Electronic address:

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http://dx.doi.org/10.1016/j.stem.2019.03.006DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6669001PMC
May 2019

The Pediatric Cell Atlas: Defining the Growth Phase of Human Development at Single-Cell Resolution.

Dev Cell 2019 04 28;49(1):10-29. Epub 2019 Mar 28.

Department of Biomedical Informatics, University of Cincinnati College of Medicine, and Cincinnati Children's Hospital Medical Center, Division of Biomedical Informatics, Cincinnati, OH 45229, USA.

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http://dx.doi.org/10.1016/j.devcel.2019.03.001DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6616346PMC
April 2019

Automatic disease stage classification of glioblastoma multiforme histopathological images using deep convolutional neural network.

Biomed Eng Lett 2018 Aug 25;8(3):321-327. Epub 2018 Jun 25.

1Graduate School of Engineering, Mie University, 1577 Kurima-machiya, Tsu, Mie 514-8507 Japan.

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http://dx.doi.org/10.1007/s13534-018-0077-0DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6208537PMC
August 2018

Expression Profiling of Fibroblasts in Chronic and Acute Disease Models Reveals Novel Pathways in Kidney Fibrosis.

J Am Soc Nephrol 2019 01 13;30(1):80-94. Epub 2018 Dec 13.

Department of Pathology, University of Michigan, Ann Arbor, Michigan; and

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http://dx.doi.org/10.1681/ASN.2018060644DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6317603PMC
January 2019

Chromatin-associated APC regulates gene expression in collaboration with canonical WNT signaling and AP-1.

Oncotarget 2018 Jul 27;9(58):31214-31230. Epub 2018 Jul 27.

Department of Cancer Biology and Genetics, The Ohio State University College of Medicine, Columbus, Ohio, United States of America.

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http://dx.doi.org/10.18632/oncotarget.25781DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6101278PMC
July 2018

The Genetic Landscape of Hypoplastic Left Heart Syndrome.

Pediatr Cardiol 2018 Aug 22;39(6):1069-1081. Epub 2018 Mar 22.

Department of Developmental Biology, University of Pittsburgh School of Medicine, Rangos Research Center, 530 45th St., Pittsburgh, PA, 15201, USA.

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http://dx.doi.org/10.1007/s00246-018-1861-4DOI Listing
August 2018

Reconstructing differentiation networks and their regulation from time series single-cell expression data.

Genome Res 2018 Jan 9. Epub 2018 Jan 9.

Computational Biology Department, School of Computer Science, Carnegie Mellon University, Pittsburgh, Pennsylvania 15213, USA.

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http://dx.doi.org/10.1101/gr.225979.117DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5848617PMC
January 2018

PRECISION MEDICINE: FROM DIPLOTYPES TO DISPARITIES TOWARDS IMPROVED HEALTH AND THERAPIES.

Pac Symp Biocomput 2018 ;23:389-399

Population and Quantitative Health Sciences, Institute for Computational Biology, Case Western Reserve University, Cleveland, OH, 44106, USA,

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6182117PMC
August 2018

p190-B RhoGAP and intracellular cytokine signals balance hematopoietic stem and progenitor cell self-renewal and differentiation.

Nat Commun 2017 02 8;8:14382. Epub 2017 Feb 8.

Division of Experimental Hematology and Cancer Biology, Cincinnati Children's Research Foundation, University of Cincinnati College of Medicine, Cincinnati, Ohio 45229, USA.

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http://dx.doi.org/10.1038/ncomms14382DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5309857PMC
February 2017

Profound loss of esophageal tissue differentiation in patients with eosinophilic esophagitis.

J Allergy Clin Immunol 2017 Sep 17;140(3):738-749.e3. Epub 2017 Jan 17.

Division of Allergy and Immunology, Cincinnati Children's Hospital Medical Center, Cincinnati, Ohio. Electronic address:

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http://dx.doi.org/10.1016/j.jaci.2016.11.042DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5513800PMC
September 2017

Single-cell analysis of mixed-lineage states leading to a binary cell fate choice.

Nature 2016 09 31;537(7622):698-702. Epub 2016 Aug 31.

Division of Immunobiology and Center for Systems Immunology, Cincinnati Children's Hospital Medical Center, Cincinnati, Ohio 45229, USA.

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http://dx.doi.org/10.1038/nature19348DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5161694PMC
September 2016

Sickle cell anemia mice develop a unique cardiomyopathy with restrictive physiology.

Proc Natl Acad Sci U S A 2016 08 8;113(35):E5182-91. Epub 2016 Aug 8.

Division of Hematology, Cincinnati Children's Hospital Medical Center, Cincinnati, OH 45229; Division of Experimental Hematology and Cancer Biology, Cincinnati Children's Hospital Medical Center, Cincinnati, OH 45229; Cancer and Blood Diseases Institute, Cincinnati Children's Hospital Medical Center, Cincinnati, OH 45229;

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http://dx.doi.org/10.1073/pnas.1600311113DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5024607PMC
August 2016

Genetic lineage tracing defines myofibroblast origin and function in the injured heart.

Nat Commun 2016 07 22;7:12260. Epub 2016 Jul 22.

Department of Pediatrics and Molecular Cardiovascular Biology, Cincinnati Children's Hospital Medical Center, Cincinnati, Ohio 45229, USA.

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http://dx.doi.org/10.1038/ncomms12260DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5512625PMC
July 2016

Data mining differential clinical outcomes associated with drug regimens using adverse event reporting data.

Nat Biotechnol 2016 07;34(7):697-700

Division of Biomedical Informatics, Cincinnati Children's Hospital Medical Center, Cincinnati, Ohio, USA.

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http://dx.doi.org/10.1038/nbt.3623DOI Listing
July 2016

PRECISION MEDICINE: DATA AND DISCOVERY FOR IMPROVED HEALTH AND THERAPY.

Pac Symp Biocomput 2016 ;21:243-8

Stanford University School of Medicine & Khosla Ventures, Stanford, CA, USA,

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5180448PMC
February 2018

A Shh-Foxf-Fgf18-Shh Molecular Circuit Regulating Palate Development.

PLoS Genet 2016 Jan 8;12(1):e1005769. Epub 2016 Jan 8.

Division of Developmental Biology, Cincinnati Children's Hospital Medical Center, Cincinnati, Ohio, United States of America.

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http://dx.doi.org/10.1371/journal.pgen.1005769DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4712829PMC
January 2016

Red Blood Cell Dysfunction Induced by High-Fat Diet: Potential Implications for Obesity-Related Atherosclerosis.

Circulation 2015 Nov 14;132(20):1898-908. Epub 2015 Oct 14.

From Hematology/Oncology, Department of Internal Medicine, College of Medicine, University of Cincinnati, OH (D.U., R.S., R.K., R.S., V.B., M.P., R.S.F., V.Y.B.); Vascular Biology Center, Georgia Regents University, Augusta, GA (T.B., S.H., T.C., D.J.F., N.L.W.); Cardiovascular Diseases, Department of Internal Medicine, College of Medicine, University of Cincinnati, OH (D.C., N.B., W.T., D.M.); Department of Nutritional Sciences, College of Allied Health Sciences, University of Cincinnati, OH (D.C., A.P.); Department of Pathology, College of Medicine, University of Cincinnati, OH (D.Y.H., W.S.D.); Biomedical Informatics and Developmental Biology / Department of Pediatrics, College of Medicine, University of Cincinnati and Cincinnati Children's Hospital and Medical Center, OH (B.J.A.); Experimental Hematology / Department of Pediatrics, College of Medicine, University of Cincinnati and Cincinnati Children's Hospital and Medical Center, OH (T.K.); Hemoshear LLC, Charlottesville, VA (D.M.); and Department of Emergency Medicine, University of Texas Southwestern Medical Center, Dallas (A.B.).

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http://circ.ahajournals.org/content/early/2015/10/14/CIRCULA
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http://circ.ahajournals.org/lookup/doi/10.1161/CIRCULATIONAH
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http://dx.doi.org/10.1161/CIRCULATIONAHA.115.017313DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4772773PMC
November 2015

Intrinsic Age-Dependent Changes and Cell-Cell Contacts Regulate Nephron Progenitor Lifespan.

Dev Cell 2015 Oct;35(1):49-62

Division of Developmental Biology, Cincinnati Children's Hospital Medical Center, 3333 Burnet Avenue, Cincinnati, OH 45220, USA. Electronic address:

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http://dx.doi.org/10.1016/j.devcel.2015.09.009DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4615609PMC
October 2015

Calcineurin Links Mitochondrial Elongation with Energy Metabolism.

Cell Metab 2015 Nov 24;22(5):838-50. Epub 2015 Sep 24.

Helmholtz Diabetes Center, Helmholtz Zentrum München, 85764 Neuherberg, Germany; Division of Metabolic Diseases, Technische Universität München, 80333 Munich, Germany. Electronic address:

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http://dx.doi.org/10.1016/j.cmet.2015.08.022DOI Listing
November 2015

Genetic and Informatic Analyses Implicate Kif12 as a Candidate Gene within the Mpkd2 Locus That Modulates Renal Cystic Disease Severity in the Cys1cpk Mouse.

PLoS One 2015 21;10(8):e0135678. Epub 2015 Aug 21.

Department of Genetics, The University of Alabama at Birmingham, Birmingham, AL 35294, United States of America; Center for Translational Science, Children's National Health System, Washington, DC 20010, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0135678PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4546649PMC
May 2016

DEK over-expression promotes mitotic defects and micronucleus formation.

Cell Cycle 2015 6;14(24):3939-53. Epub 2015 May 6.

a Cancer and Blood Diseases Institute; Cincinnati Children's Hospital Medical Center and University of Cincinnati ; Cincinnati , OH USA.

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http://dx.doi.org/10.1080/15384101.2015.1044177DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4825741PMC
September 2016

p62 is required for stem cell/progenitor retention through inhibition of IKK/NF-κB/Ccl4 signaling at the bone marrow macrophage-osteoblast niche.

Cell Rep 2014 Dec 18;9(6):2084-97. Epub 2014 Dec 18.

Division of Experimental Hematology and Cancer Biology, Cincinnati Children's Hospital Medical Center, 3333 Burnet Avenue, Cincinnati, OH 45229, USA; Hoxworth Blood Center, University of Cincinnati College of Medicine, 3130 Highland Avenue, Cincinnati, OH 45267, USA. Electronic address:

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http://dx.doi.org/10.1016/j.celrep.2014.11.031DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4277497PMC
December 2014

Transdifferentiation of human fibroblasts to endothelial cells: role of innate immunity.

Circulation 2015 Jan 30;131(3):300-9. Epub 2014 Oct 30.

From the Department of Cardiovascular Sciences, Houston Methodist Research Institute, Houston, TX (N.S., W.T.W., F.O., S.M., J.P.C.); Division of Cardiovascular Medicine, Stanford University, Stanford, CA (J.L., A.J.); and Division of Biomedical Informatics, Cincinnati Children's Hospital Medical Center, Cincinnati, OH (P.D., B.J.A.).

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http://dx.doi.org/10.1161/CIRCULATIONAHA.113.007394DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4309381PMC
January 2015

ToppMiR: ranking microRNAs and their mRNA targets based on biological functions and context.

Nucleic Acids Res 2014 Jul 14;42(Web Server issue):W107-13. Epub 2014 May 14.

Department of Computer Science, University of Cincinnati, Cincinnati, OH 45221, USA Division of Biomedical Informatics, Cincinnati Children's Hospital Medical Center, Cincinnati, OH 45229, USA Department of Pediatrics, University of Cincinnati, Cincinnati, OH 45221, USA

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http://dx.doi.org/10.1093/nar/gku409DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4086116PMC
July 2014

A gene expression atlas of early craniofacial development.

Dev Biol 2014 Jul 26;391(2):133-46. Epub 2014 Apr 26.

Cincinnati Children׳s Medical Center, Division of Developmental Biology, 3333 Burnet Avenue, Cincinnati, OH 45229, USA. Electronic address:

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http://dx.doi.org/10.1016/j.ydbio.2014.04.016DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4095820PMC
July 2014

G-CSF drives a posttraumatic immune program that protects the host from infection.

J Immunol 2014 Mar 27;192(5):2405-17. Epub 2014 Jan 27.

Division of Pulmonary, Critical Care and Sleep Medicine, University of Cincinnati College of Medicine, Cincinnati, OH 45267;

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http://dx.doi.org/10.4049/jimmunol.1302752DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3944070PMC
March 2014

Parsing the roles of the transcription factors GATA-4 and GATA-6 in the adult cardiac hypertrophic response.

PLoS One 2013 31;8(12):e84591. Epub 2013 Dec 31.

Department of Pediatrics, Cincinnati Children's Hospital Medical Center, University of Cincinnati, Ohio, United States of America ; Howard Hughes Medical Institute, Cincinnati Children's Hospital Medical Center, Cincinnati, Ohio, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0084591PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3877334PMC
September 2014

Computational approaches for human disease gene prediction and ranking.

Adv Exp Med Biol 2014 ;799:69-84

Department of Computer Science, College of Engineering and Applied Science, University of Cincinnati, Cincinnati, OH, USA.

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http://dx.doi.org/10.1007/978-1-4614-8778-4_4DOI Listing
April 2014

Growth factor independent-1 maintains Notch1-dependent transcriptional programming of lymphoid precursors.

PLoS Genet 2013 12;9(9):e1003713. Epub 2013 Sep 12.

Division of Cellular and Molecular Immunology; Cincinnati Children's Hospital Medical Center, Cincinnati, Ohio, United States of America.

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http://dx.doi.org/10.1371/journal.pgen.1003713DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3772063PMC
March 2014

Keloid-derived keratinocytes exhibit an abnormal gene expression profile consistent with a distinct causal role in keloid pathology.

Wound Repair Regen 2013 Jul-Aug;21(4):530-44

Research Department, Shriners Hospitals for Children-Cincinnati, Cincinnati, Ohio 45229, USA.

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http://dx.doi.org/10.1111/wrr.12060DOI Listing
February 2014

Microarray analysis of active cardiac remodeling genes in a familial hypertrophic cardiomyopathy mouse model rescued by a phospholamban knockout.

Physiol Genomics 2013 Sep 25;45(17):764-73. Epub 2013 Jun 25.

Department of Molecular Genetics, Biochemistry, & Microbiology, University of Cincinnati College of Medicine, Cincinnati, OH 45267-0524, USA.

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http://dx.doi.org/10.1152/physiolgenomics.00023.2013DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3763065PMC
September 2013

Blockade of chronic type I interferon signaling to control persistent LCMV infection.

Science 2013 Apr;340(6129):202-7

Department of Microbiology, Immunology and Molecular Genetics and the UCLA AIDS Institute, David Geffen School of Medicine, University of California, Los Angeles (UCLA), Los Angeles, CA 90095, USA.

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http://dx.doi.org/10.1126/science.1235208DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3704950PMC
April 2013

Targeted ablation of miR-21 decreases murine eosinophil progenitor cell growth.

PLoS One 2013 22;8(3):e59397. Epub 2013 Mar 22.

Division of Allergy and Immunology, Department of Pediatrics, Cincinnati Children's Hospital Medical Center, University of Cincinnati College of Medicine, Cincinnati, Ohio, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0059397PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3606295PMC
September 2013

SPDEF functions as a colorectal tumor suppressor by inhibiting β-catenin activity.

Gastroenterology 2013 May 1;144(5):1012-1023.e6. Epub 2013 Feb 1.

Division of Gastroenterology, Hepatology, and Nutrition, Cincinnati Children's Hospital Medical Center, Cincinnati, OH 45229, USA.

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http://dx.doi.org/10.1053/j.gastro.2013.01.043DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3738069PMC
May 2013

MiR-223 deficiency increases eosinophil progenitor proliferation.

J Immunol 2013 Feb 16;190(4):1576-82. Epub 2013 Jan 16.

Division of Allergy and Immunology, Cincinnati Children's Hospital Medical Center, University of Cincinnati College of Medicine, Cincinnati, OH 45229, USA.

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http://dx.doi.org/10.4049/jimmunol.1202897DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3563857PMC
February 2013

MEK inhibition exhibits efficacy in human and mouse neurofibromatosis tumors.

J Clin Invest 2013 Jan 10;123(1):340-7. Epub 2012 Dec 10.

Children’s Hospital Medical Center, Division of Experimental Hematology and Cancer Biology, 3333 Burnet Ave., M.L.C. 7013, Cincinnati, Ohio 45229, USA.

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http://dx.doi.org/10.1172/JCI60578DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3533264PMC
January 2013

Ras-driven transcriptome analysis identifies aurora kinase A as a potential malignant peripheral nerve sheath tumor therapeutic target.

Clin Cancer Res 2012 Sep 18;18(18):5020-30. Epub 2012 Jul 18.

Divisions of Experimental Hematology and Cancer Biology, Oncology, and Biomedical Informatics, Cincinnati Children's Hospital Medical Center, Cincinnati, USA.

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http://dx.doi.org/10.1158/1078-0432.CCR-12-1072DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3902639PMC
September 2012

Genes that confer the identity of the renin cell.

J Am Soc Nephrol 2011 Dec 27;22(12):2213-25. Epub 2011 Oct 27.

Harrison Distinguished Professor of Pediatrics and Biology, University of Virginia, 409 Lane Road, MR4 Building, Room 2001, Charlottesville, VA 22908, USA.

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http://dx.doi.org/10.1681/ASN.2011040401DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3279933PMC
December 2011

Serine 105 phosphorylation of transcription factor GATA4 is necessary for stress-induced cardiac hypertrophy in vivo.

Proc Natl Acad Sci U S A 2011 Jul 11;108(30):12331-6. Epub 2011 Jul 11.

Department of Pediatrics, University of Cincinnati, Cincinnati, OH 45229, USA.

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http://dx.doi.org/10.1073/pnas.1104499108DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3145698PMC
July 2011

LMO7 mediates cell-specific activation of the Rho-myocardin-related transcription factor-serum response factor pathway and plays an important role in breast cancer cell migration.

Mol Cell Biol 2011 Aug 13;31(16):3223-40. Epub 2011 Jun 13.

Department of Cancer and Cell Biology, Vontz Center for Molecular Studies, University of Cincinnati College of Medicine, Cincinnati, OH 45267-0521, USA.

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http://dx.doi.org/10.1128/MCB.01365-10DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3147800PMC
August 2011

A Drosophila model of the neurodegenerative disease SCA17 reveals a role of RBP-J/Su(H) in modulating the pathological outcome.

Hum Mol Genet 2011 Sep 8;20(17):3424-36. Epub 2011 Jun 8.

Key Laboratory of Cell Proliferation and Differentiation of Ministry of Education, Center of Developmental Biology and Genetics, College of Life Sciences, Peking University, Beijing 100871, PR China.

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http://hmg.oxfordjournals.org/content/20/17/3424.full.pdf
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http://www.hmg.oxfordjournals.org/cgi/doi/10.1093/hmg/ddr251
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http://dx.doi.org/10.1093/hmg/ddr251DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3153307PMC
September 2011

Modulation of chromatin position and gene expression by HDAC4 interaction with nucleoporins.

J Cell Biol 2011 Apr;193(1):21-9

Department of Pediatrics, Cincinnati Children's Hospital Medical Center, University of Cincinnati, Cincinnati, OH 45229, USA.

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http://dx.doi.org/10.1083/jcb.201101046DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3082185PMC
April 2011

Gene expression analysis identifies potential biomarkers of neurofibromatosis type 1 including adrenomedullin.

Clin Cancer Res 2010 Oct 25;16(20):5048-57. Epub 2010 Aug 25.

Division of Experimental Hematology and Cancer Biology, Cincinnati Children's Hospital Medical Center, Cincinnati, Ohio 45229, USA.

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http://dx.doi.org/10.1158/1078-0432.CCR-10-0613DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4837895PMC
October 2010

The transcription factor GATA-6 regulates pathological cardiac hypertrophy.

Circ Res 2010 Oct 12;107(8):1032-40. Epub 2010 Aug 12.

Howard Hughes Medical Institute, Cincinnati Children's Hospital Medical Center, 240 Albert Sabin Way, Cincinnati, OH 45229-3039, USA.

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http://dx.doi.org/10.1161/CIRCRESAHA.110.220764DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2967029PMC
October 2010

Molecular engineering and validation of an oncolytic herpes simplex virus type 1 transcriptionally targeted to midkine-positive tumors.

J Gene Med 2010 Jul;12(7):613-23

Division of Pediatric General and Thoracic Surgery, The Center For Molecular Fetal Therapy, Children's Hospital Medical Center, Cincinnati, OH, USA.

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http://dx.doi.org/10.1002/jgm.1479DOI Listing
July 2010

PhenoHM: human-mouse comparative phenome-genome server.

Nucleic Acids Res 2010 Jul 27;38(Web Server issue):W165-74. Epub 2010 May 27.

Department of Computer Science, University of Cincinnati, Cincinnati, OH, USA.

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http://dx.doi.org/10.1093/nar/gkq472DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2896149PMC
July 2010

ToppCluster: a multiple gene list feature analyzer for comparative enrichment clustering and network-based dissection of biological systems.

Nucleic Acids Res 2010 Jul 19;38(Web Server issue):W96-102. Epub 2010 May 19.

Division of Biomedical Informatics, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA.

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http://dx.doi.org/10.1093/nar/gkq418DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2896202PMC
July 2010

Staging of biliary atresia at diagnosis by molecular profiling of the liver.

Genome Med 2010 May 13;2(5):33. Epub 2010 May 13.

Division of Pediatric Gastroenterology, Hepatology and Nutrition of Cincinnati Children's Hospital Medical Center, 3333 Burnet Avenue, Cincinnati, OH 45229, USA.

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http://dx.doi.org/10.1186/gm154DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2887077PMC
May 2010

Onecut-2 knockout mice fail to thrive during early postnatal period and have altered patterns of gene expression in small intestine.

Physiol Genomics 2010 Jun 30;42(1):115-25. Epub 2010 Mar 30.

Division of Developmental Biology, Department of Pediatrics, University of Cincinnati College of Medicine, Cincinnati, Ohio 45229-3039, USA.

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http://dx.doi.org/10.1152/physiolgenomics.00017.2010DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2888562PMC
June 2010

High-throughput detection of mutations responsible for childhood hearing loss using resequencing microarrays.

BMC Biotechnol 2010 Feb 10;10:10. Epub 2010 Feb 10.

1Biomedical Informatics, Cincinnati Children's Hospital Medical Center, Cincinnati, Ohio 45229, USA.

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http://dx.doi.org/10.1186/1472-6750-10-10DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2841091PMC
February 2010