Bruce A McDonald

Bruce A McDonald

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A 19-isolate reference-quality global pangenome for the fungal wheat pathogen Zymoseptoria tritici.

BMC Biol 2020 02 11;18(1):12. Epub 2020 Feb 11.

Laboratory of Evolutionary Genetics, Institute of Biology, University of Neuchâtel, Neuchâtel, Switzerland.

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http://dx.doi.org/10.1186/s12915-020-0744-3DOI Listing
February 2020

A tradeoff between tolerance and resistance to a major fungal pathogen in elite wheat cultivars.

New Phytol 2020 Jan 9. Epub 2020 Jan 9.

Plant Pathology, Institute of Integrative Biology, LFW, ETH Zurich, 8092, Zurich, Switzerland.

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http://dx.doi.org/10.1111/nph.16418DOI Listing
January 2020

The emergence of the multi-species NIP1 effector in Rhynchosporium was accompanied by high rates of gene duplications and losses.

Environ Microbiol 2019 Aug 11;21(8):2677-2695. Epub 2019 Apr 11.

Laboratory of Evolutionary Genetics, Institute of Biology, University of Neuchâtel, 2000 Neuchâtel, Switzerland.

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http://dx.doi.org/10.1111/1462-2920.14583DOI Listing
August 2019

Morphological changes in response to environmental stresses in the fungal plant pathogen Zymoseptoria tritici.

Sci Rep 2019 Jul 3;9(1):9642. Epub 2019 Jul 3.

Plant Pathology Group, Institute of Integrative Biology, ETH Zürich, 8092, Zürich, Switzerland.

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http://dx.doi.org/10.1038/s41598-019-45994-3DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6610121PMC
July 2019

Pan-Parastagonospora Comparative Genome Analysis-Effector Prediction and Genome Evolution.

Genome Biol Evol 2018 09 1;10(9):2443-2457. Epub 2018 Sep 1.

Centre for Crop & Disease Management, School of Molecular & Life Sciences, Curtin University, Bentley, Western Australia, Australia.

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http://dx.doi.org/10.1093/gbe/evy192DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6152946PMC
September 2018

Hyperspectral Canopy Sensing of Wheat Septoria Tritici Blotch Disease.

Front Plant Sci 2018 17;9:1195. Epub 2018 Aug 17.

Crop Science Group, Institute of Agricultural Sciences, ETH Zurich, Zurich, Switzerland.

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http://dx.doi.org/10.3389/fpls.2018.01195DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6108383PMC
August 2018

Evidence for local adaptation and pleiotropic effects associated with melanization in a plant pathogenic fungus.

Fungal Genet Biol 2018 06 4;115:33-40. Epub 2018 Apr 4.

Plant Pathology Group, Institute of Integrative Biology, ETH Zurich, 8092 Zurich, Switzerland. Electronic address:

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http://dx.doi.org/10.1016/j.fgb.2018.04.002DOI Listing
June 2018

Genome-wide evidence for divergent selection between populations of a major agricultural pathogen.

Mol Ecol 2018 06 23;27(12):2725-2741. Epub 2018 May 23.

Laboratory of Evolutionary Genetics, Institute of Biology, University of Neuchâtel, Neuchâtel, Switzerland.

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http://dx.doi.org/10.1111/mec.14711DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6032900PMC
June 2018

Ranking Quantitative Resistance to Septoria tritici Blotch in Elite Wheat Cultivars Using Automated Image Analysis.

Phytopathology 2018 May 4;108(5):568-581. Epub 2018 Apr 4.

First, seventh, and eighth authors: Plant Pathology Group, Institute of Integrative Biology, ETH Zurich, Zurich, Switzerland; second, third, fourth, and fifth authors: Crop Science Group, Institute of Agricultural Sciences, ETH Zurich, Zurich, Switzerland; and sixth author: Crop Breeding and Genetic Resources, Department of Plant Breeding, Agroscope, Nyon, Switzerland.

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http://dx.doi.org/10.1094/PHYTO-04-17-0163-RDOI Listing
May 2018

Comparative Transcriptomics Reveals How Wheat Responds to Infection by Zymoseptoria tritici.

Mol Plant Microbe Interact 2018 04 13;31(4):420-431. Epub 2018 Feb 13.

2 Department of Plant and Microbial Biology, University of Zurich, Zurich 8008, Switzerland.

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http://dx.doi.org/10.1094/MPMI-10-17-0245-RDOI Listing
April 2018

Genome-Wide Detection of Genes Under Positive Selection in Worldwide Populations of the Barley Scald Pathogen.

Genome Biol Evol 2018 04;10(5):1315-1332

Laboratory of Evolutionary Genetics, Institute of Biology, University of Neuchâtel, Switzerland.

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http://dx.doi.org/10.1093/gbe/evy087DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5972619PMC
April 2018

When resistance gene pyramids are not durable-the role of pathogen diversity.

Mol Plant Pathol 2018 03;19(3):521-524

Plant Pathology, Institute of Integrative Biology, ETH Zurich, Zurich 8092, Switzerland.

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http://dx.doi.org/10.1111/mpp.12636DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6637985PMC
March 2018

Evolutionary analyses of the avirulence effector AvrStb6 in global populations of Zymoseptoria tritici identify candidate amino acids involved in recognition.

Mol Plant Pathol 2018 Jan 24. Epub 2018 Jan 24.

Plant Pathology, Institute of Integrative Biology, ETH Zurich, 8092 Zurich, Switzerland.

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http://doi.wiley.com/10.1111/mpp.12662
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http://dx.doi.org/10.1111/mpp.12662DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6637991PMC
January 2018

Widespread signatures of selection for secreted peptidases in a fungal plant pathogen.

BMC Evol Biol 2018 01 24;18(1). Epub 2018 Jan 24.

Plant Pathology, Institute of Integrative Biology, ETH Zurich, Universitätstrasse 2, -8092, Zurich, CH, Switzerland.

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http://dx.doi.org/10.1186/s12862-018-1123-3DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5784588PMC
January 2018

Reversing resistance: different routes and common themes across pathogens.

Proc Biol Sci 2017 Sep;284(1863)

Institute of Integrative Biology, ETH Zürich, CH-8092 Zurich, Switzerland

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http://dx.doi.org/10.1098/rspb.2017.1619DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5627214PMC
September 2017

Mutations in the CYP51 gene reduce DMI sensitivity in Parastagonospora nodorum populations in Europe and China.

Pest Manag Sci 2017 Jul 26;73(7):1503-1510. Epub 2016 Dec 26.

Plant Pathology Group, Institute of Integrative Biology, ETH Zurich/LFW, Universitätstrasse 2, Zurich, Switzerland.

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http://dx.doi.org/10.1002/ps.4486DOI Listing
July 2017

A fungal wheat pathogen evolved host specialization by extensive chromosomal rearrangements.

ISME J 2017 05 24;11(5):1189-1204. Epub 2017 Jan 24.

Plant Pathology, Institute of Integrative Biology, Zurich, Switzerland.

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http://dx.doi.org/10.1038/ismej.2016.196DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5437930PMC
May 2017

The genetic basis of local adaptation for pathogenic fungi in agricultural ecosystems.

Mol Ecol 2017 Apr 24;26(7):2027-2040. Epub 2016 Oct 24.

Plant Pathology, Institute of Integrative Biology, ETH Zurich, 8092, Zurich, Switzerland.

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http://dx.doi.org/10.1111/mec.13870DOI Listing
April 2017

Multilocus resistance evolution to azole fungicides in fungal plant pathogen populations.

Mol Ecol 2016 Dec 30;25(24):6124-6142. Epub 2016 Nov 30.

Plant Pathology, Institute of Integrative Biology, ETH Zurich, Zurich, 8092, Switzerland.

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http://dx.doi.org/10.1111/mec.13916DOI Listing
December 2016

Rapid emergence of pathogens in agro-ecosystems: global threats to agricultural sustainability and food security.

Philos Trans R Soc Lond B Biol Sci 2016 12;371(1709)

Environmental Genomics Group, Max Planck Institute for Evolutionary Biology, August-Thienemann-Str. 2, 24306 Plön, Germany.

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http://dx.doi.org/10.1098/rstb.2016.0026DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5095548PMC
December 2016

Linear Correlation Analysis of Zymoseptoria tritici Aggressiveness with In Vitro Growth Rate.

Phytopathology 2016 11 18;106(11):1255-1261. Epub 2016 Aug 18.

First, second, third, and fourth authors: Fujian Key Lab of Plant Virology, Institute of Plant Virology, Fujian Agriculture and Forestry University, Fuzhou, 350002, China; fifth author: Plant Pathology Group, Institute of Integrative Biology, ETH Zurich, LFW, Zurich, CH-8092, Switzerland; and sixth author: Key Lab for Biopesticide and Chemical Biology, Ministry of Education, Fujian Agriculture and Forestry University, Fuzhou.

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http://dx.doi.org/10.1094/PHYTO-12-15-0338-RDOI Listing
November 2016

Validation of Genome-Wide Association Studies as a Tool to Identify Virulence Factors in Parastagonospora nodorum.

Phytopathology 2016 10 15;106(10):1177-1185. Epub 2016 Aug 15.

First, second, fourth, fifth, and ninth authors: Department of Plant Pathology, North Dakota State University, Fargo 58108; third and ninth authors: United States Department of Agriculture-Agricultural Research Service, Northern Crop Science Laboratory, Cereal Crops Research Unit, Fargo, ND, 58102; sixth author: Department of Plant Science, North Dakota State University, Fargo; seventh author: Centre for Crop and Disease Management, Department of Environment and Agriculture, School of Science, Curtin University, Perth, WA 6102, Australia; and eighth author: Institute of Integrative Biology, Plant Pathology Group, Swiss Federal Institute of Technology, ETH Zentrum, LFW, CH-8092 Zürich, Switzerland.

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http://dx.doi.org/10.1094/PHYTO-02-16-0113-FIDOI Listing
October 2016

How Knowledge of Pathogen Population Biology Informs Management of Septoria Tritici Blotch.

Phytopathology 2016 09 27;106(9):948-55. Epub 2016 Jul 27.

First author: Plant Pathology, Institute of Integrative Biology, ETH Zurich, CH-8092 Zurich, Switzerland; and second author: Department of Botany and Plant Pathology, Oregon State University, Corvallis 97331.

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http://dx.doi.org/10.1094/PHYTO-03-16-0131-RVWDOI Listing
September 2016

Population Genomics of Fungal and Oomycete Pathogens.

Annu Rev Phytopathol 2016 08 8;54:323-46. Epub 2016 Jan 8.

Plant Pathology and Plant-Microbe Biology Section, School of Integrative Plant Science, Cornell University, Ithaca, New York 14853; email:

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http://dx.doi.org/10.1146/annurev-phyto-080614-115913DOI Listing
August 2016

An Improved Method for Measuring Quantitative Resistance to the Wheat Pathogen Zymoseptoria tritici Using High-Throughput Automated Image Analysis.

Phytopathology 2016 Jul 13;106(7):782-8. Epub 2016 May 13.

First, fifth, and sixth authors: Plant Pathology, Institute of Integrative Biology, ETH Zürich, Zürich; second and fourth authors: Department of Botany and Plant Pathology, Oregon State University, Corvallis; and third author: Theoretical Biology, Institute of Integrative Biology, ETH Zürich.

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http://dx.doi.org/10.1094/PHYTO-01-16-0018-RDOI Listing
July 2016

A Global Analysis of CYP51 Diversity and Azole Sensitivity in Rhynchosporium commune.

Phytopathology 2016 Apr 8;106(4):355-61. Epub 2016 Mar 8.

First, second, fourth, and fifth authors: Plant Pathology, Institute of Integrative Biology, ETH Zurich, CH-8092 Zurich, Switzerland; and third author: Scotland's Rural College (SRUC), West Mains Road, Edinburgh UK, EH9 3JG.

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http://dx.doi.org/10.1094/PHYTO-07-15-0158-RDOI Listing
April 2016

The influence of genetic drift and selection on quantitative traits in a plant pathogenic fungus.

PLoS One 2014 10;9(11):e112523. Epub 2014 Nov 10.

Evolutionary Botany, Institute of Biology, University of Neuchâtel, Neuchâtel, Switzerland.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0112523PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4226542PMC
December 2015

The Urochloa Foliar Blight and Collar Rot Pathogen Rhizoctonia solani AG-1 IA Emerged in South America Via a Host Shift from Rice.

Phytopathology 2015 Nov 22;105(11):1475-86. Epub 2015 Oct 22.

First and third authors: UNESP University of São Paulo State, Jaboticabal Campus, SP, Brazil; second, fourth, and seventh authors: UNESP, Ilha Solteira Campus, SP, Brazil; fifth author: EMBRAPA Brazilian Agricultural Research Corporation, Boa Vista, RR, Brazil; sixth author: EMBRAPA, Porto Velho, RO, Brazil; and eighth author: Institute of Integrative Biology, ETH Zurich, Switzerland.

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http://dx.doi.org/10.1094/PHYTO-04-15-0093-RDOI Listing
November 2015

The Impact of Recombination Hotspots on Genome Evolution of a Fungal Plant Pathogen.

Genetics 2015 Nov 21;201(3):1213-28. Epub 2015 Sep 21.

Plant Pathology, Institute of Integrative Biology, ETH Zurich, 8092 Zurich, Switzerland.

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http://dx.doi.org/10.1534/genetics.115.180968DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4649646PMC
November 2015

Genome-wide analysis of Fusarium graminearum field populations reveals hotspots of recombination.

BMC Genomics 2015 Nov 24;16:996. Epub 2015 Nov 24.

ETH Zurich, Institute of Integrative Biology, Zurich (IBZ), Plant Pathology, 8092, Zurich, Switzerland.

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http://dx.doi.org/10.1186/s12864-015-2166-0DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4659151PMC
November 2015

QTL mapping of fungicide sensitivity reveals novel genes and pleiotropy with melanization in the pathogen Zymoseptoria tritici.

Fungal Genet Biol 2015 Jul 13;80:53-67. Epub 2015 May 13.

Institute of Integrative Biology, Plant Pathology Group, ETH Zürich, Universitätstrasse 2, 8092 Zürich, Switzerland. Electronic address:

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http://dx.doi.org/10.1016/j.fgb.2015.05.001DOI Listing
July 2015

Is Zymoseptoria tritici a hemibiotroph?

Fungal Genet Biol 2015 Jun;79:29-32

Plant Pathology Group, Institute of Integrative Biology, ETH Zurich, Zurich, Switzerland.

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http://dx.doi.org/10.1016/j.fgb.2015.04.001DOI Listing
June 2015

Recent advances in the Zymoseptoria tritici-wheat interaction: insights from pathogenomics.

Front Plant Sci 2015 24;6:102. Epub 2015 Feb 24.

Plant Sciences Division, Research School of Biology, The Australian National University , Canberra, ACT, Australia.

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http://dx.doi.org/10.3389/fpls.2015.00102DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4338680PMC
March 2015

Quantitative trait locus mapping of melanization in the plant pathogenic fungus Zymoseptoria tritici.

G3 (Bethesda) 2014 Oct 29;4(12):2519-33. Epub 2014 Oct 29.

Institute of Integrative Biology, Plant Pathology, ETH Zürich, 8092 Zürich, Switzerland.

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http://dx.doi.org/10.1534/g3.114.015289DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4267946PMC
October 2014

Hitchhiking selection is driving intron gain in a pathogenic fungus.

Mol Biol Evol 2014 Jul 7;31(7):1741-9. Epub 2014 Apr 7.

Institute of Integrative Biology, ETH Zurich, Zurich, Switzerland.

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http://dx.doi.org/10.1093/molbev/msu123DOI Listing
July 2014

DNA fingerprinting of pearls to determine their origins.

PLoS One 2013 9;8(10):e75606. Epub 2013 Oct 9.

Department of Environmental System Science, Swiss Federal Institute of Technology, Zurich, Switzerland ; Swiss Gemmological Institute SSEF, Basel, Switzerland.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0075606PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3794040PMC
June 2014

Comparative analysis of mitochondrial genomes from closely related Rhynchosporium species reveals extensive intron invasion.

Fungal Genet Biol 2014 Jan 13;62:34-42. Epub 2013 Nov 13.

Plant Pathology Group, Institute of Integrative Biology, ETH Zurich, Universitätstrasse 2, CH-8092 Zurich, Switzerland.

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http://dx.doi.org/10.1016/j.fgb.2013.11.001DOI Listing
January 2014

Experimental measures of pathogen competition and relative fitness.

Annu Rev Phytopathol 2013 13;51:131-53. Epub 2013 Jun 13.

Key Lab for Biopesticide and Chemical Biology, Ministry of Education, Fujian Agriculture and Forestry University, Fuzhou, 350002, China.

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http://dx.doi.org/10.1146/annurev-phyto-082712-102302DOI Listing
December 2013

Association between virulence and triazole tolerance in the phytopathogenic fungus Mycosphaerella graminicola.

PLoS One 2013 15;8(3):e59568. Epub 2013 Mar 15.

Key Lab for Biopesticide and Chemical Biology, Ministry of Education, Fujian Agriculture and Forestry University, Fuzhou, Fujian, People's Republic of China.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0059568PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3598747PMC
September 2013

Global diversity and distribution of three necrotrophic effectors in Phaeosphaeria nodorum and related species.

New Phytol 2013 Jul 4;199(1):241-51. Epub 2013 Apr 4.

Plant Pathology Group, Institute of Integrative Biology, ETH Zurich, Zurich, Switzerland.

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http://dx.doi.org/10.1111/nph.12257DOI Listing
July 2013

Coevolution and life cycle specialization of plant cell wall degrading enzymes in a hemibiotrophic pathogen.

Mol Biol Evol 2013 Jun 20;30(6):1337-47. Epub 2013 Mar 20.

Department of Environmental Systems Science, Institute of Integrative Biology, ETH Zurich, Zurich, Switzerland.

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http://dx.doi.org/10.1093/molbev/mst041DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3649673PMC
June 2013

Breakage-fusion-bridge cycles and large insertions contribute to the rapid evolution of accessory chromosomes in a fungal pathogen.

PLoS Genet 2013 Jun 13;9(6):e1003567. Epub 2013 Jun 13.

Plant Pathology, Institute of Integrative Biology, ETH Zurich, Zurich, Switzerland.

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http://dx.doi.org/10.1371/journal.pgen.1003567DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3681731PMC
June 2013

Intron gains and losses in the evolution of Fusarium and Cryptococcus fungi.

Genome Biol Evol 2012 ;4(11):1148-61

Plant Pathology, Institute of Integrative Biology, ETH Zurich, Switzerland.

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http://dx.doi.org/10.1093/gbe/evs091DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3514964PMC
April 2013

Local adaptation and evolutionary potential along a temperature gradient in the fungal pathogen Rhynchosporium commune.

Evol Appl 2013 Apr 3;6(3):524-34. Epub 2013 Jan 3.

Institute of Integrative Biology, Plant Pathology, ETH Zürich Zürich, Switzerland.

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http://dx.doi.org/10.1111/eva.12039DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3673479PMC
April 2013

Phylogenetic and population genetic analyses of Phaeosphaeria nodorum and its close relatives indicate cryptic species and an origin in the Fertile Crescent.

Fungal Genet Biol 2012 Nov 24;49(11):882-95. Epub 2012 Aug 24.

Plant Pathology Group, Institute of Integrative Biology, ETH Zurich, CH-8092 Zürich, Switzerland.

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http://dx.doi.org/10.1016/j.fgb.2012.08.001DOI Listing
November 2012

The accessory genome as a cradle for adaptive evolution in pathogens.

PLoS Pathog 2012 26;8(4):e1002608. Epub 2012 Apr 26.

Plant Pathology, Institute of Integrative Biology, ETH Zurich, Zurich, Switzerland.

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http://dx.doi.org/10.1371/journal.ppat.1002608DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3343108PMC
September 2012

Comparative pathogenomics reveals horizontally acquired novel virulence genes in fungi infecting cereal hosts.

PLoS Pathog 2012 Sep 27;8(9):e1002952. Epub 2012 Sep 27.

Commonwealth Scientific and Industrial Research Organization (CSIRO) Plant Industry, Queensland Bioscience Precinct, Brisbane, Queensland, Australia.

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http://dx.doi.org/10.1371/journal.ppat.1002952DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3460631PMC
September 2012

Evidence for extensive recent intron transposition in closely related fungi.

Curr Biol 2011 Dec 17;21(23):2017-22. Epub 2011 Nov 17.

Institute of Integrative Biology, Swiss Federal Institute of Technology (ETH Zurich), 8092 Zurich, Switzerland.

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http://dx.doi.org/10.1016/j.cub.2011.10.041DOI Listing
December 2011

Two new species of Rhynchosporium.

Mycologia 2011 Jan-Feb;103(1):195-202. Epub 2010 Aug 31.

Forest Pathology and Dendrology, Institute of Integrative Biology (IBZ), ETH Zürich, 8092 Zürich, Switzerland.

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http://dx.doi.org/10.3852/10-119DOI Listing
April 2011

Thermal adaptation in the fungal pathogen Mycosphaerella graminicola.

Mol Ecol 2011 Apr 14;20(8):1689-701. Epub 2011 Mar 14.

Key Laboratory of Biopesticide and Chemical Biology, Ministry of Education, Fujian Agriculture and Forestry University, Fuzhou, Fujian 350002, China.

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http://dx.doi.org/10.1111/j.1365-294X.2011.05023.xDOI Listing
April 2011

Evolutionary history of the mitochondrial genome in Mycosphaerella populations infecting bread wheat, durum wheat and wild grasses.

Mol Phylogenet Evol 2011 Feb 9;58(2):192-7. Epub 2010 Dec 9.

Plant Pathology Group, Institute of Integrative Biology, ETH Zurich, Zurich, Switzerland.

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http://dx.doi.org/10.1016/j.ympev.2010.12.002DOI Listing
February 2011

Sexual recombinants make a significant contribution to epidemics caused by the wheat pathogen Phaeosphaeria nodorum.

Phytopathology 2010 Sep;100(9):855-62

Plant Pathology, Institute of Integrative Biology, ETH Zurich, LFW, Universitaetstrasse, Zürich, Switzerland.

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http://apsjournals.apsnet.org/doi/10.1094/PHYTO-100-9-0855
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http://dx.doi.org/10.1094/PHYTO-100-9-0855DOI Listing
September 2010

Genetic structure of populations of the rice-infecting pathogen Rhizoctonia solani AG-1 IA from China.

Phytopathology 2009 Sep;99(9):1090-9

Plant Pathology, Institute of Integrative Biology, ETH Zurich, Universitaetstr. 2, LFW B28, 8092 Zurich, Switzerland.

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http://dx.doi.org/10.1094/PHYTO-99-9-1090DOI Listing
September 2009

SnTox3 acts in effector triggered susceptibility to induce disease on wheat carrying the Snn3 gene.

PLoS Pathog 2009 Sep 18;5(9):e1000581. Epub 2009 Sep 18.

Department of Plant Pathology, North Dakota State University, Fargo, North Dakota, United States of America.

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http://dx.doi.org/10.1371/journal.ppat.1000581DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2736379PMC
September 2009

Population genetics of fungal and oomycete effectors involved in gene-for-gene interactions.

Mol Plant Microbe Interact 2009 Apr;22(4):371-80

Bioinformatics Research Center, Aahus University, Denmark.

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http://dx.doi.org/10.1094/MPMI-22-4-0371DOI Listing
April 2009

QoI resistance emerged independently at least 4 times in European populations of Mycosphaerella graminicola.

Pest Manag Sci 2009 Feb;65(2):155-62

Plant Pathology Group, Institute of Integrative Biology, ETH Zurich/LFW, Universitätstrasse 2, CH-8092 Zurich, Switzerland.

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http://doi.wiley.com/10.1002/ps.1662
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http://dx.doi.org/10.1002/ps.1662DOI Listing
February 2009

Phylogeographical analyses reveal global migration patterns of the barley scald pathogen Rhynchosporium secalis.

Mol Ecol 2009 Jan 8;18(2):279-93. Epub 2008 Dec 8.

Forest Pathology and Dendrology, Institute of Integrative Biology, ETH-Zurich, CHN, CH-8092 Zürich, Switzerland.

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http://doi.wiley.com/10.1111/j.1365-294X.2008.04013.x
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http://dx.doi.org/10.1111/j.1365-294X.2008.04013.xDOI Listing
January 2009

The origins of plant pathogens in agro-ecosystems.

Annu Rev Phytopathol 2008 ;46:75-100

Plant Pathology, Institute of Integrative Biology, ETH Zurich, CH-8092 Zurich, Switzerland.

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http://dx.doi.org/10.1146/annurev.phyto.010708.154114DOI Listing
November 2008

Rapid speciation following recent host shifts in the plant pathogenic fungus Rhynchosporium.

Evolution 2008 Jun 2;62(6):1418-36. Epub 2008 Apr 2.

Plant Pathology, Institute of Integrative Biology, ETH-Zurich, LFW, CH-8092 Zürich, Switzerland.

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http://doi.wiley.com/10.1111/j.1558-5646.2008.00390.x
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June 2008

Intraspecific comparison and annotation of two complete mitochondrial genome sequences from the plant pathogenic fungus Mycosphaerella graminicola.

Fungal Genet Biol 2008 May 23;45(5):628-37. Epub 2007 Dec 23.

Plant Pathology Group, Institute of Integrative Biology, ETH Zurich/LFW, Universitätstrasse 2, CH-8092 Zurich, Switzerland.

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http://dx.doi.org/10.1016/j.fgb.2007.12.005DOI Listing
May 2008

Concordant evolution of mitochondrial and nuclear genomes in the wheat pathogen Phaeosphaeria nodorum.

Fungal Genet Biol 2007 Aug 10;44(8):764-72. Epub 2007 Jan 10.

Plant Pathology, Institute of Integrative Biology, ETH Zurich, LFW, Universitaetstrasse 2, CH-8092 Zürich, Switzerland.

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http://dx.doi.org/10.1016/j.fgb.2007.01.003DOI Listing
August 2007

Significant difference in pathogenicity between MAT1-1 and MAT1-2 isolates in the wheat pathogen Mycosphaerella graminicola.

Fungal Genet Biol 2007 May 8;44(5):339-46. Epub 2006 Dec 8.

Scottish Crop Research Institute, Invergowrie, Dundee DD2 5DA, Scotland, UK.

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May 2007

Geographical variation and positive diversifying selection in the host-specific toxin SnToxA.

Mol Plant Pathol 2007 May;8(3):321-32

Plant Pathology, Institute of Integrative Biology, ETH Zurich LFW, Universitätstrasse 2, CH-8092 Zurich, Switzerland.

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http://dx.doi.org/10.1111/j.1364-3703.2007.00396.xDOI Listing
May 2007

Origin and domestication of the fungal wheat pathogen Mycosphaerella graminicola via sympatric speciation.

Mol Biol Evol 2007 Feb 9;24(2):398-411. Epub 2006 Nov 9.

Plant Pathology, Institute of Integrative Biology, Eidgenössische Techniche Hochschule, Zurich Land und Forst Wissenschaft, Zurich, Switzerland.

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http://dx.doi.org/10.1093/molbev/msl169DOI Listing
February 2007

Global migration patterns in the fungal wheat pathogen Phaeosphaeria nodorum.

Mol Ecol 2006 Sep;15(10):2895-904

Institute of Integrative Biology, Plant Pathology, ETH Zurich, LFW, Universitätstrasse 2, CH-8092 Zurich, Switzerland.

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http://dx.doi.org/10.1111/j.1365-294X.2006.02986.xDOI Listing
September 2006

Emergence of a new disease as a result of interspecific virulence gene transfer.

Nat Genet 2006 Aug 9;38(8):953-6. Epub 2006 Jul 9.

US Department of Agriculture-Agricultural Research Service (USDA-ARS), Cereal Crops Research Unit, Red River Valley Agricultural Research Center, Northern Crop Science Lab, Fargo, North Dakota 58105, USA.

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http://dx.doi.org/10.1038/ng1839DOI Listing
August 2006

Molecular population genetic analysis differentiates two virulence mechanisms of the fungal avirulence gene NIP1.

Mol Plant Microbe Interact 2004 Oct;17(10):1114-25

Institute of Plant Sciences, Plant Pathology Group, Federal Institute of Technology, Universitätstrasse 2, CH-8092 Zürich, Switzerland.

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October 2004

Evidence for subdivision of the root-endophyte Phialocephala fortinii into cryptic species and recombination within species.

Fungal Genet Biol 2004 Jul;41(7):676-87

Swiss Federal Institute of Technology, Department of Environmental Sciences, Forest Pathology and Dendrology, ETH-Zentrum, CH-8092 Zürich.

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July 2004

Further evidence for sexual reproduction in Rhynchosporium secalis based on distribution and frequency of mating-type alleles.

Fungal Genet Biol 2003 Nov;40(2):115-25

Institute of Plant Sciences, Plant Pathology Group, Federal Institute of Technology, ETH-Zentrum, LFW, CH-8092 Zürich, Switzerland.

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November 2003

Physiologic data acquisition system and database for the study of disease dynamics in the intensive care unit.

Crit Care Med 2003 Feb;31(2):433-41

Division of Pediatric Critical Care, Doernbecher Children's Hospital, Oregon Health Sciences University, Portland, USA.

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http://dx.doi.org/10.1097/01.CCM.0000050285.93097.52DOI Listing
February 2003

Pathogen population genetics, evolutionary potential, and durable resistance.

Annu Rev Phytopathol 2002 20;40:349-79. Epub 2002 Feb 20.

Institute of Plant Sciences, Plant Pathology Group, Federal Institute of Technology, ETH-Zentrum, LFW, CH-8092 Zürich, Switzerland.

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http://dx.doi.org/10.1146/annurev.phyto.40.120501.101443DOI Listing
December 2002