Brian A Kidd

Brian A Kidd

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Brian A Kidd

Brian A Kidd

Publications by authors named "Brian A Kidd"

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Lyme Disease Patient Trajectories Learned from Electronic Medical Data for Stratification of Disease Risk and Therapeutic Response.

Sci Rep 2019 Mar 14;9(1):4460. Epub 2019 Mar 14.

Department of Genetics and Genomic Sciences, Institute for Next Generation Healthcare, Icahn School of Medicine at Mount Sinai, One Gustave L. Levy Place Box 1498, New York, NY, 10029, USA.

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http://dx.doi.org/10.1038/s41598-019-41128-xDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6418311PMC
March 2019

Reflecting health: smart mirrors for personalized medicine.

NPJ Digit Med 2018 8;1:62. Epub 2018 Nov 8.

1Institute for Next Generation Healthcare, Icahn School of Medicine at Mount Sinai, New York, NY USA.

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http://dx.doi.org/10.1038/s41746-018-0068-7DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6550276PMC
November 2018

Isolation and Identification of the Follicular Microbiome: Implications for Acne Research.

J Invest Dermatol 2018 09 13;138(9):2033-2040. Epub 2018 Mar 13.

Department of Dermatology, Penn State College of Medicine, Hershey, Pennsylvania, USA. Electronic address:

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http://dx.doi.org/10.1016/j.jid.2018.02.038DOI Listing
September 2018

Integrative Analysis of Disease Signatures Shows Inflammation Disrupts Juvenile Experience-Dependent Cortical Plasticity.

eNeuro 2016 Nov-Dec;3(6). Epub 2017 Jan 18.

Department of Neuroscience, Icahn School of Medicine at Mount Sinai, New York, New York 10029; Department of Psychiatry, Icahn School of Medicine at Mount Sinai, New York, New York 10029; Department of Ophthalmology, Icahn School of Medicine at Mount Sinai, New York, New York 10029; Mindich Child Health and Development Institute, Icahn School of Medicine at Mount Sinai, New York, New York 10029; Friedman Brain Institute, Icahn School of Medicine at Mount Sinai, New York, New York 10029.

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http://eneuro.org/cgi/doi/10.1523/ENEURO.0240-16.2016
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http://dx.doi.org/10.1523/ENEURO.0240-16.2016DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5241709PMC
October 2017

Environments Tune and Select Cellular Diversity.

Authors:
Brian A Kidd

Trends Immunol 2017 09 31;38(9):617-618. Epub 2017 Jul 31.

Department of Genetics and Genomic Sciences, Institute for Next Generation Healthcare and Icahn School of Medicine at Mount Sinai, New York, NY, USA. Electronic address:

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http://dx.doi.org/10.1016/j.it.2017.07.006DOI Listing
September 2017

Automated cell type discovery and classification through knowledge transfer.

Bioinformatics 2017 Jun;33(11):1689-1695

Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mt. Sinai, New York, NY, USA.

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http://dx.doi.org/10.1093/bioinformatics/btx054DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5447237PMC
June 2017

Novel Therapeutics Identification for Fibrosis in Renal Allograft Using Integrative Informatics Approach.

Sci Rep 2017 01 4;7:39487. Epub 2017 Jan 4.

Division of Nephrology, Department of Medicine, Icahn School of Medicine at Mount Sinai, One Gustave L. Levy Place, New York, NY 10029, USA.

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http://dx.doi.org/10.1038/srep39487DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5209709PMC
January 2017

Defective Signaling in the JAK-STAT Pathway Tracks with Chronic Inflammation and Cardiovascular Risk in Aging Humans.

Cell Syst 2016 10 13;3(4):374-384.e4. Epub 2016 Oct 13.

Department of Microbiology and Immunology, Stanford University School of Medicine, Stanford, CA 94305, USA; Institute of Immunity, Transplantation and Infection, Stanford University School of Medicine, Stanford, CA 94305, USA; Howard Hughes Medical Institute, Chevy Chase, MD 20815, USA. Electronic address:

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http://www.cell.com/cell-systems/pdf/S2405-4712(16)30299-X.p
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http://dx.doi.org/10.1016/j.cels.2016.09.009DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5358544PMC
October 2016

Variants in TRIM22 That Affect NOD2 Signaling Are Associated With Very-Early-Onset Inflammatory Bowel Disease.

Gastroenterology 2016 05 4;150(5):1196-1207. Epub 2016 Feb 4.

SickKids Inflammatory Bowel Disease Center and Cell Biology Program, Research Institute, Hospital for Sick Children, Toronto, Ontario, Canada; Division of Gastroenterology, Hepatology, and Nutrition, Department of Pediatrics, University of Toronto, Hospital for Sick Children, Toronto, Ontario, Canada; Institute of Medical Science, University of Toronto, Toronto, Ontario, Canada. Electronic address:

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https://linkinghub.elsevier.com/retrieve/pii/S00165085160012
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http://dx.doi.org/10.1053/j.gastro.2016.01.031DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4842103PMC
May 2016

In silico methods for drug repurposing and pharmacology.

Wiley Interdiscip Rev Syst Biol Med 2016 05 15;8(3):186-210. Epub 2016 Apr 15.

Department of Genetics and Genomic Sciences, Icahn Institute for Genomics and Multiscale Biology, New York, NY, USA.

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http://dx.doi.org/10.1002/wsbm.1337DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4845762PMC
May 2016

Deep Patient: An Unsupervised Representation to Predict the Future of Patients from the Electronic Health Records.

Sci Rep 2016 05 17;6:26094. Epub 2016 May 17.

Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.

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http://dx.doi.org/10.1038/srep26094DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4869115PMC
May 2016

Polygenic overlap between schizophrenia risk and antipsychotic response: a genomic medicine approach.

Lancet Psychiatry 2016 Apr 23;3(4):350-7. Epub 2016 Feb 23.

Division of Psychiatric Genomics, Department of Psychiatry, New York, NY, USA; Institute for Genomics and Multiscale Biology, New York, NY, USA; Department of Genetics and Genomic Sciences, New York, NY, USA; Friedman Brain Institute, New York, NY, USA.

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http://dx.doi.org/10.1016/S2215-0366(15)00553-2DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4982509PMC
April 2016

Cross-Tissue Regulatory Gene Networks in Coronary Artery Disease.

Cell Syst 2016 03 3;2(3):196-208. Epub 2016 Mar 3.

Cardiovascular Genomics Group, Division of Vascular Biology, Department of Medical Biochemistry and Biophysics, Karolinska Institutet, 171 77 Stockholm, Sweden; Department of Physiology, Institute of Biomedicine and Translation Medicine, University of Tartu, 51014 Tartu, Estonia; Clinical Gene Networks AB, 114 44 Stockholm, Sweden; Department of Genetics & Genomic Sciences, Institute of Genomics and Multiscale Biology, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA; Cardiovascular Institute, Department of Medicine, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA. Electronic address:

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http://dx.doi.org/10.1016/j.cels.2016.02.002DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4855300PMC
March 2016

Decoding the immune response to successful influenza vaccination.

Authors:
Brian A Kidd

Nat Immunol 2016 Feb;17(2):113-4

Department of Genetics and Genomic Sciences and the Icahn Institute for Genomics and Multiscale Biology, Icahn School of Medicine at Mount Sinai, New York, New York, USA.

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http://dx.doi.org/10.1038/ni.3372DOI Listing
February 2016

Mapping the effects of drugs on the immune system.

Nat Biotechnol 2016 Jan 30;34(1):47-54. Epub 2015 Nov 30.

Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, New York, USA.

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http://dx.doi.org/10.1038/nbt.3367DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4706827PMC
January 2016

Integrative network modeling approaches to personalized cancer medicine.

Per Med 2015 Jun;12(3):245-257

Department of Genetics & Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA; Icahn Institute for Genomics & Multiscale Biology, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA; Department of Population Health Science and Policy, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.

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http://dx.doi.org/10.2217/pme.14.87DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4806849PMC
June 2015

Clonal Deletion Prunes but Does Not Eliminate Self-Specific αβ CD8(+) T Lymphocytes.

Immunity 2015 May;42(5):929-41

Department of Microbiology and Immunology, Stanford University School of Medicine, Stanford, CA 94305, USA; Howard Hughes Medical Institute, Stanford University School of Medicine, Stanford, CA 94305, USA. Electronic address:

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http://dx.doi.org/10.1016/j.immuni.2015.05.001DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4455602PMC
May 2015

Cytomegalovirus infection enhances the immune response to influenza.

Sci Transl Med 2015 Apr;7(281):281ra43

Department of Microbiology and Immunology, School of Medicine, Stanford University, Stanford, CA 94305, USA. Institute for Immunity, Transplantation and Infection, School of Medicine, Stanford University, Stanford, CA 94305, USA. The Howard Hughes Medical Institute.

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http://dx.doi.org/10.1126/scitranslmed.aaa2293DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4505610PMC
April 2015

The Split Virus Influenza Vaccine rapidly activates immune cells through Fcγ receptors.

Vaccine 2014 Oct 6;32(45):5989-97. Epub 2014 Sep 6.

The Department of Microbiology and Immunology, Stanford University, Stanford, CA 94305, United States; Institute for Immunity, Transplantation, and Infection, Stanford University, Stanford, CA 94305, United States; Howard Hughes Medical Institute, Stanford University, Stanford, CA 94305, United States. Electronic address:

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http://dx.doi.org/10.1016/j.vaccine.2014.07.115DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4191649PMC
October 2014

Unifying immunology with informatics and multiscale biology.

Nat Immunol 2014 Feb;15(2):118-27

1] Department of Genetics and Genomic Sciences, New York, New York, USA. [2] Icahn Institute for Genomics and Multiscale Biology, New York, New York, USA. [3] Icahn School of Medicine at Mount Sinai, New York, New York, USA.

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http://dx.doi.org/10.1038/ni.2787DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4345400PMC
February 2014

Allosteric coupling in the bacterial adhesive protein FimH.

J Biol Chem 2013 Aug 2;288(33):24128-39. Epub 2013 Jul 2.

Department of Bioengineering, University of Washington, Seattle, Washington 98195-5061, USA.

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http://dx.doi.org/10.1074/jbc.M113.461376DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3745355PMC
August 2013

Combinatorial tetramer staining and mass cytometry analysis facilitate T-cell epitope mapping and characterization.

Nat Biotechnol 2013 Jul 9;31(7):623-9. Epub 2013 Jun 9.

Agency for Science, Technology and Research, Singapore Immunology Network, Singapore.

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http://dx.doi.org/10.1038/nbt.2593DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3796952PMC
July 2013

Virus-specific CD4(+) memory-phenotype T cells are abundant in unexposed adults.

Immunity 2013 Feb 7;38(2):373-83. Epub 2013 Feb 7.

Division of Immunology and Rheumatology, Stanford University School of Medicine, Stanford, CA 94304, USA.

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http://dx.doi.org/10.1016/j.immuni.2012.10.021DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3626102PMC
February 2013

The bacterial fimbrial tip acts as a mechanical force sensor.

PLoS Biol 2011 May 10;9(5):e1000617. Epub 2011 May 10.

Department of Microbiology, University of Washington, Seattle, Washington, United States of America.

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http://dx.doi.org/10.1371/journal.pbio.1000617DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3091844PMC
May 2011

Donor strand exchange and conformational changes during E. coli fimbrial formation.

J Struct Biol 2010 Dec 4;172(3):380-8. Epub 2010 Jun 4.

Department of Biological Structure, University of Washington, Box 357420, Seattle, WA 98195-7420, USA.

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http://dx.doi.org/10.1016/j.jsb.2010.06.002DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2964381PMC
December 2010

Computation of conformational coupling in allosteric proteins.

PLoS Comput Biol 2009 Aug 28;5(8):e1000484. Epub 2009 Aug 28.

Department of Bioengineering, University of Washington, Seattle, Washington, United States of America.

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http://dx.doi.org/10.1371/journal.pcbi.1000484DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2720451PMC
August 2009

Epitope spreading to citrullinated antigens in mouse models of autoimmune arthritis and demyelination.

Arthritis Res Ther 2008 30;10(5):R119. Epub 2008 Sep 30.

Department of Medicine, Division of Immunology and Rheumatology, CCSR 4135, 269 Campus Dr, Stanford University School of Medicine, Stanford, CA, USA.

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http://arthritis-research.biomedcentral.com/articles/10.1186
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http://dx.doi.org/10.1186/ar2523DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2592807PMC
February 2009

Proteomic analysis of secreted proteins in early rheumatoid arthritis: anti-citrulline autoreactivity is associated with up regulation of proinflammatory cytokines.

Ann Rheum Dis 2007 Jun 10;66(6):712-9. Epub 2006 Aug 10.

Division of Immunology and Rheumatology, Department of Medicine, Stanford University School of Medicine, and Palo Alto VA Health Care System, MC 154R, 3801 Miranda Avenue, Palo Alto, CA 94304, USA.

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http://ard.bmj.com/cgi/doi/10.1136/ard.2006.054924
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http://dx.doi.org/10.1136/ard.2006.054924DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1954670PMC
June 2007

Tolerizing DNA vaccines for autoimmune arthritis.

Autoimmunity 2006 Dec;39(8):675-82

Department of Neurology and Neurological Sciences, Stanford University School of Medicine, Stanford, CA 94305, USA.

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http://dx.doi.org/10.1080/08916930601061603DOI Listing
December 2006

Treatment of autoimmune neuroinflammation with a synthetic tryptophan metabolite.

Science 2005 Nov;310(5749):850-5

Department of Neurology and Neurological Sciences, Beckman Center for Molecular Medicine, Stanford University, Stanford, CA 94305, USA.

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http://www.sciencemag.org/cgi/doi/10.1126/science.1117634
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http://dx.doi.org/10.1126/science.1117634DOI Listing
November 2005

Antigen microarray profiling of autoantibodies in rheumatoid arthritis.

Arthritis Rheum 2005 Sep;52(9):2645-55

Division of Immunology and Rheumatology, Department of Medicine, Stanford University School of Medicine, Stanford, California, USA.

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http://dx.doi.org/10.1002/art.21269DOI Listing
September 2005

Immunity to the extracellular domain of Nogo-A modulates experimental autoimmune encephalomyelitis.

J Immunol 2004 Dec;173(11):6981-92

Department of Neurology and Neurological Sciences, School of Medicine, Howard Hughes Medical Institute, Stanford University, Stanford, CA 94305, USA.

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http://dx.doi.org/10.4049/jimmunol.173.11.6981DOI Listing
December 2004