Brenna M Henn

Brenna M Henn

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Brenna M Henn

Brenna M Henn

Publications by authors named "Brenna M Henn"

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46Publications

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Genetic analyses of diverse populations improves discovery for complex traits.

Nature 2019 Jun 19;570(7762):514-518. Epub 2019 Jun 19.

Division of Public Health Science, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.

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http://dx.doi.org/10.1038/s41586-019-1310-4DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6785182PMC
June 2019

Clarifying distinct models of modern human origins in Africa.

Curr Opin Genet Dev 2018 12 10;53:148-156. Epub 2018 Nov 10.

Department of Anthropology, University of California, Davis, CA, 95616, United States.

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http://dx.doi.org/10.1016/j.gde.2018.10.003DOI Listing
December 2018

Rapid evolution of a skin-lightening allele in southern African KhoeSan.

Proc Natl Acad Sci U S A 2018 12 10;115(52):13324-13329. Epub 2018 Dec 10.

Department of Ecology and Evolution, State University of New York at Stony Brook, Stony Brook, NY 11794;

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http://dx.doi.org/10.1073/pnas.1801948115DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6310813PMC
December 2018

Editorial overview: The history, geography and adaptation of human genes: A tribute to L. Luca Cavalli-Sforza.

Curr Opin Genet Dev 2018 12;53:iii-v

Unit of Human Evolutionary Genetics, Institut Pasteur and CNRS UMR2000, Paris, France. Electronic address:

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http://dx.doi.org/10.1016/j.gde.2018.11.004DOI Listing
December 2018

Did Our Species Evolve in Subdivided Populations across Africa, and Why Does It Matter?

Trends Ecol Evol 2018 08 11;33(8):582-594. Epub 2018 Jul 11.

Laboratoire Évolution & Diversité Biologique (EDB UMR 5174), Université de Toulouse Midi-Pyrénées, CNRS, IRD, UPS. 118 route de Narbonne, Bat 4R1, 31062 Toulouse cedex 9, France; Instituto Gulbenkian de Ciência, P-2780-156, Oeiras, Portugal.

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http://dx.doi.org/10.1016/j.tree.2018.05.005DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6092560PMC
August 2018

IMPUTOR: Phylogenetically Aware Software for Imputation of Errors in Next-Generation Sequencing.

Genome Biol Evol 2018 04;10(5):1248-1254

Department of Anthropology and the Genome Center, University of California, Davis.

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https://academic.oup.com/gbe/article/10/5/1248/4990909
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http://dx.doi.org/10.1093/gbe/evy088DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5961346PMC
April 2018

Localization of adaptive variants in human genomes using averaged one-dependence estimation.

Nat Commun 2018 02 19;9(1):703. Epub 2018 Feb 19.

Center for Computational Molecular Biology, Brown University, Providence, RI, 02912, USA.

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http://dx.doi.org/10.1038/s41467-018-03100-7DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5818606PMC
February 2018

Worldwide patterns of human epigenetic variation.

Nat Ecol Evol 2017 Oct 28;1(10):1577-1583. Epub 2017 Aug 28.

Department of Biology, Stanford University, Stanford, CA, 94305, USA.

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http://dx.doi.org/10.1038/s41559-017-0299-zDOI Listing
October 2017

A post-GWAS analysis of predicted regulatory variants and tuberculosis susceptibility.

PLoS One 2017 6;12(4):e0174738. Epub 2017 Apr 6.

SA MRC Centre for TB Research, DST/NRF Centre of Excellence for Biomedical TB Research, Division of Molecular Biology and Human Genetics, Faculty of Medicine and Health Sciences, Stellenbosch University, Cape Town, South Africa.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0174738PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5383035PMC
September 2017

Population structure and infectious disease risk in southern Africa.

Mol Genet Genomics 2017 Jun 22;292(3):499-509. Epub 2017 Feb 22.

SA MRC Centre for TB Research, DST/NRF Centre of Excellence for Biomedical Tuberculosis Research, Division of Molecular Biology and Human Genetics, Faculty of Medical and Health Sciences, Stellenbosch University, Tygerberg, Parow, 7500, South Africa.

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http://dx.doi.org/10.1007/s00438-017-1296-2DOI Listing
June 2017

The Simons Genome Diversity Project: 300 genomes from 142 diverse populations.

Nature 2016 Oct 21;538(7624):201-206. Epub 2016 Sep 21.

Department of Genetics, Harvard Medical School, Boston, Massachusetts 02115, USA.

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http://dx.doi.org/10.1038/nature18964DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5161557PMC
October 2016

Population and Evolutionary Genomics of Amblyomma americanum, an Expanding Arthropod Disease Vector.

Genome Biol Evol 2016 05 12;8(5):1351-60. Epub 2016 May 12.

Department of Molecular Genetics & Microbiology, Stony Brook University.

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http://dx.doi.org/10.1093/gbe/evw080DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4898797PMC
May 2016

Loss and Gain of Natural Killer Cell Receptor Function in an African Hunter-Gatherer Population.

PLoS Genet 2015 Aug 20;11(8):e1005439. Epub 2015 Aug 20.

Departments of Structural Biology and Microbiology & Immunology, Stanford University School of Medicine, Stanford, California, United States of America.

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http://dx.doi.org/10.1371/journal.pgen.1005439DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4546388PMC
August 2015

Estimating the mutation load in human genomes.

Nat Rev Genet 2015 Jun 12;16(6):333-43. Epub 2015 May 12.

McGill University, Department of Human Genetics and Genome Quebec Innovation Centre, 740 Dr Penfield Avenue, Montreal, Quebec H3A 0G1, Canada.

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http://dx.doi.org/10.1038/nrg3931DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4959039PMC
June 2015

A panel of ancestry informative markers for the complex five-way admixed South African coloured population.

PLoS One 2013 20;8(12):e82224. Epub 2013 Dec 20.

Molecular Biology and Human Genetics, MRC Centre for Molecular and Cellular Biology and the DST/NRF Centre of Excellence for Biomedical TB Research, Faculty of Medicine and Health Sciences, Stellenbosch University, Tygerberg, South Africa.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0082224PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3869660PMC
March 2015

Ancient human genomes suggest three ancestral populations for present-day Europeans.

Authors:
Iosif Lazaridis Nick Patterson Alissa Mittnik Gabriel Renaud Swapan Mallick Karola Kirsanow Peter H Sudmant Joshua G Schraiber Sergi Castellano Mark Lipson Bonnie Berger Christos Economou Ruth Bollongino Qiaomei Fu Kirsten I Bos Susanne Nordenfelt Heng Li Cesare de Filippo Kay Prüfer Susanna Sawyer Cosimo Posth Wolfgang Haak Fredrik Hallgren Elin Fornander Nadin Rohland Dominique Delsate Michael Francken Jean-Michel Guinet Joachim Wahl George Ayodo Hamza A Babiker Graciela Bailliet Elena Balanovska Oleg Balanovsky Ramiro Barrantes Gabriel Bedoya Haim Ben-Ami Judit Bene Fouad Berrada Claudio M Bravi Francesca Brisighelli George B J Busby Francesco Cali Mikhail Churnosov David E C Cole Daniel Corach Larissa Damba George van Driem Stanislav Dryomov Jean-Michel Dugoujon Sardana A Fedorova Irene Gallego Romero Marina Gubina Michael Hammer Brenna M Henn Tor Hervig Ugur Hodoglugil Aashish R Jha Sena Karachanak-Yankova Rita Khusainova Elza Khusnutdinova Rick Kittles Toomas Kivisild William Klitz Vaidutis Kučinskas Alena Kushniarevich Leila Laredj Sergey Litvinov Theologos Loukidis Robert W Mahley Béla Melegh Ene Metspalu Julio Molina Joanna Mountain Klemetti Näkkäläjärvi Desislava Nesheva Thomas Nyambo Ludmila Osipova Jüri Parik Fedor Platonov Olga Posukh Valentino Romano Francisco Rothhammer Igor Rudan Ruslan Ruizbakiev Hovhannes Sahakyan Antti Sajantila Antonio Salas Elena B Starikovskaya Ayele Tarekegn Draga Toncheva Shahlo Turdikulova Ingrida Uktveryte Olga Utevska René Vasquez Mercedes Villena Mikhail Voevoda Cheryl A Winkler Levon Yepiskoposyan Pierre Zalloua Tatijana Zemunik Alan Cooper Cristian Capelli Mark G Thomas Andres Ruiz-Linares Sarah A Tishkoff Lalji Singh Kumarasamy Thangaraj Richard Villems David Comas Rem Sukernik Mait Metspalu Matthias Meyer Evan E Eichler Joachim Burger Montgomery Slatkin Svante Pääbo Janet Kelso David Reich Johannes Krause

Nature 2014 Sep;513(7518):409-13

1] Institute for Archaeological Sciences, University of Tübingen, Tübingen 72074, Germany. [2] Senckenberg Centre for Human Evolution and Palaeoenvironment, University of Tübingen, 72070 Tübingen, Germany. [3] Max Planck Institut für Geschichte und Naturwissenschaften, Jena 07745, Germany.

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https://genetics.med.harvard.edu/reich/Reich_Lab/Welcome_fil
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http://biorxiv.org/content/biorxiv/early/2013/12/23/001552.f
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http://www.geo.uni-tuebingen.de/fileadmin/website/arbeitsber
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http://www.nature.com/doifinder/10.1038/nature13673
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http://dx.doi.org/10.1038/nature13673DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4170574PMC
September 2014

Determining ancestry proportions in complex admixture scenarios in South Africa using a novel proxy ancestry selection method.

PLoS One 2013 16;8(9):e73971. Epub 2013 Sep 16.

Computational Biology Group, Department of Clinical Laboratory Sciences, Institute of Infectious Disease and Molecular Medicine, University of Cape Town, Medical School, Cape Town, South Africa.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0073971PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3774743PMC
May 2014

Gene flow from North Africa contributes to differential human genetic diversity in southern Europe.

Proc Natl Acad Sci U S A 2013 Jul 3;110(29):11791-6. Epub 2013 Jun 3.

Institut de Biologia Evolutiva, Consejo Superior de Investigaciones Científicas-Universitat Pompeu Fabra, Departament de Ciències Experimentals i de la Salut, Universitat Pompeu Fabra, 08003 Barcelona, Spain.

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http://dx.doi.org/10.1073/pnas.1306223110DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3718088PMC
July 2013

A tale of two haplotypes: the EDA2R/AR Intergenic region is the most divergent genomic segment between Africans and East Asians in the human genome.

Hum Biol 2012 Dec;84(6):641-94

Department of Genetics, Stanford University, Mail Stop 5120, Stanford, California 94305, USA.

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http://dx.doi.org/10.3378/027.084.0604DOI Listing
December 2012

The great human expansion.

Proc Natl Acad Sci U S A 2012 Oct 17;109(44):17758-64. Epub 2012 Oct 17.

Department of Genetics, Stanford University School of Medicine, Stanford, CA 94305, USA.

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http://www.pnas.org/cgi/doi/10.1073/pnas.1212380109
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http://dx.doi.org/10.1073/pnas.1212380109DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3497766PMC
October 2012

Demographic history and rare allele sharing among human populations.

Proc Natl Acad Sci U S A 2011 Jul 5;108(29):11983-8. Epub 2011 Jul 5.

Department of Genetics, Stanford University School of Medicine, Stanford, CA 94305-5120, USA.

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http://dx.doi.org/10.1073/pnas.1019276108DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3142009PMC
July 2011

Rapid, global demographic expansions after the origins of agriculture.

Proc Natl Acad Sci U S A 2011 Apr 28;108(15):6044-9. Epub 2011 Mar 28.

University of California, San Francisco, CA 94158, USA.

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http://dx.doi.org/10.1073/pnas.0914274108DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3076817PMC
April 2011

Human origins: Shadows of early migrations.

Nature 2010 Dec;468(7327):1044-5

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http://dx.doi.org/10.1038/4681044aDOI Listing
December 2010

Fine-scale population structure and the era of next-generation sequencing.

Hum Mol Genet 2010 Oct 28;19(R2):R221-6. Epub 2010 Sep 28.

Department of Genetics, Stanford University School of Medicine, 300 Pasteur Drive, Stanford, CA 94305, USA.

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http://dx.doi.org/10.1093/hmg/ddq403DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2953744PMC
October 2010

Characterizing the time dependency of human mitochondrial DNA mutation rate estimates.

Mol Biol Evol 2009 Jan 4;26(1):217-30. Epub 2008 Nov 4.

Department of Anthropology, Stanford University, USA.

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https://academic.oup.com/mbe/article-lookup/doi/10.1093/molb
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http://dx.doi.org/10.1093/molbev/msn244DOI Listing
January 2009

African Y chromosome and mtDNA divergence provides insight into the history of click languages.

Curr Biol 2003 Mar;13(6):464-73

Department of Anthropological Sciences, Stanford University, Stanford, CA 94305, USA.

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http://dx.doi.org/10.1016/s0960-9822(03)00130-1DOI Listing
March 2003