Publications by authors named "Bradley A Malin"

62Publications

Health and kinship matter: Learning about direct-to-consumer genetic testing user experiences via online discussions.

PLoS One 2020 8;15(9):e0238644. Epub 2020 Sep 8.

Department of Biomedical Informatics, Vanderbilt University Medical Center, Nashville, Tennessee, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0238644PLOS
September 2020

Obstetric Patients with Repetitious Hospital Location Transfers Have Prolonged Stays.

IEEE Int Conf Healthc Inform 2019 Jun 21;2019. Epub 2019 Nov 21.

Department of Biomedical Informatics Vanderbilt University.

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http://dx.doi.org/10.1109/ICHI.2019.8904557DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7286595PMC
June 2019

Patient Messaging Content Associated with Initiating Hormonal Therapy after a Breast Cancer Diagnosis.

AMIA Annu Symp Proc 2019 4;2019:962-971. Epub 2020 Mar 4.

Vanderbilt University, Nashville, TN.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7153093PMC
August 2020

Why Patient Portal Messages Indicate Risk of Readmission for Patients with Ischemic Heart Disease.

AMIA Annu Symp Proc 2019 4;2019:828-837. Epub 2020 Mar 4.

Vanderbilt University, Nashville, TN.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7153079PMC
September 2020

Public Attitudes Toward Direct to Consumer Genetic Testing.

AMIA Annu Symp Proc 2019 4;2019:774-783. Epub 2020 Mar 4.

Vanderbilt University, Nashville, Tennessee, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7153088PMC
August 2020

Modeling Care Team Structures in the Neonatal Intensive Care Unit through Network Analysis of EHR Audit Logs.

Methods Inf Med 2019 Nov 13;58(4-05):109-123. Epub 2020 Mar 13.

Department of Anesthesiology, Center for Research and Innovation in Systems Safety, Vanderbilt University Medical Center, Nashville, Tennessee, United States.

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http://dx.doi.org/10.1055/s-0040-1702237DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7356932PMC
November 2019

Deep learning predicts extreme preterm birth from electronic health records.

J Biomed Inform 2019 12 31;100:103334. Epub 2019 Oct 31.

Department of Biomedical Informatics, School of Medicine, Vanderbilt University Medical Center, Nashville, TN, USA. Electronic address:

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http://dx.doi.org/10.1016/j.jbi.2019.103334DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6899197PMC
December 2019

Ensuring electronic medical record simulation through better training, modeling, and evaluation.

J Am Med Inform Assoc 2020 01;27(1):99-108

Department of Electrical Engineering and Computer Science, Vanderbilt University, Nashville, Tennessee, USA.

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http://dx.doi.org/10.1093/jamia/ocz161DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6913223PMC
January 2020

Leveraging Electronic Health Records to Learn Progression Path for Severe Maternal Morbidity.

Stud Health Technol Inform 2019 Aug;264:148-152

Department of Biomedical Informatics, Vanderbilt University Medical Center, Nashville, TN, United States.

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http://dx.doi.org/10.3233/SHTI190201DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7309346PMC
August 2019

Learning to Identify Severe Maternal Morbidity from Electronic Health Records.

Stud Health Technol Inform 2019 Aug;264:143-147

Department of Biomedical Informatics, Vanderbilt University Medical Center, Nashville, TN, United States.

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http://dx.doi.org/10.3233/SHTI190200DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7337420PMC
August 2019

A clinical risk prediction model to identify patients with hepatorenal syndrome at hospital admission.

Int J Clin Pract 2019 Nov 7;73(11):e13393. Epub 2019 Aug 7.

Tennessee Valley Healthcare System (TVHS) Veterans Administration Medical Center, Veteran's Health Administration, Nashville, Tennessee.

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https://onlinelibrary.wiley.com/doi/abs/10.1111/ijcp.13393
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http://dx.doi.org/10.1111/ijcp.13393DOI Listing
November 2019

Efficient Active Learning for Electronic Medical Record De-identification.

AMIA Jt Summits Transl Sci Proc 2019 6;2019:462-471. Epub 2019 May 6.

Vanderbilt University, Nashville, TN, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6568071PMC
May 2019

A systematic literature review of machine learning in online personal health data.

J Am Med Inform Assoc 2019 06;26(6):561-576

Department of Biomedical Informatics, Vanderbilt University Medical Center, Nashville, Tennessee, USA.

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https://academic.oup.com/jamia/advance-article/doi/10.1093/j
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http://dx.doi.org/10.1093/jamia/ocz009DOI Listing
June 2019

Learning When Communications Between Healthcare Providers Indicate Hormonal Therapy Medication Discontinuation.

AMIA Annu Symp Proc 2018 5;2018:1591-1600. Epub 2018 Dec 5.

Vanderbilt University Medical Center, Nashville, Tennessee, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6371302PMC
January 2020

Detecting the Presence of an Individual in Phenotypic Summary Data.

AMIA Annu Symp Proc 2018 5;2018:760-769. Epub 2018 Dec 5.

Vanderbilt University, Nashville, Tennessee, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6371366PMC
December 2019

Phenotyping through Semi-Supervised Tensor Factorization (PSST).

AMIA Annu Symp Proc 2018 5;2018:564-573. Epub 2018 Dec 5.

Emory University, Atlanta, GA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6371355PMC
October 2019

DMMS: A Decentralized Blockchain Ledger for the Management of Medication Histories.

Blockchain Healthc Today 2019 4;2. Epub 2019 Jan 4.

Department of Biomedical Informatics, Vanderbilt University Medical Center, Nashville, TN, USA.

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http://dx.doi.org/10.30953/bhty.v2.38DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7286573PMC
January 2019

The therapy is making me sick: how online portal communications between breast cancer patients and physicians indicate medication discontinuation.

J Am Med Inform Assoc 2018 11;25(11):1444-1451

Department of Biomedical Informatics, Vanderbilt University Medical Center, Nashville, Tennessee, USA.

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http://dx.doi.org/10.1093/jamia/ocy118DOI Listing
November 2018

A systematic literature review of individuals' perspectives on privacy and genetic information in the United States.

PLoS One 2018 31;13(10):e0204417. Epub 2018 Oct 31.

Center for Genetic Privacy & Identity in Community Settings, Vanderbilt University Medical Center, Nashville, TN, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0204417PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6209148PMC
March 2019

Predicting Neonatal Encephalopathy From Maternal Data in Electronic Medical Records.

AMIA Jt Summits Transl Sci Proc 2018 18;2017:359-368. Epub 2018 May 18.

Duke University, Durham, NC.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5961831PMC
May 2018

Talking About My Care: Detecting Mentions of Hormonal Therapy Adherence Behavior in an Online Breast Cancer Community.

AMIA Annu Symp Proc 2017 16;2017:1868-1877. Epub 2018 Apr 16.

Vanderbilt University, Nashville, Tennessee, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5977653PMC
February 2019

Evaluating the Effectiveness of Auditing Rules for Electronic Health Record Systems.

AMIA Annu Symp Proc 2017 16;2017:866-875. Epub 2018 Apr 16.

Vanderbilt University, Nashville, TN.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5977720PMC
March 2019

Development of an automated phenotyping algorithm for hepatorenal syndrome.

J Biomed Inform 2018 04 9;80:87-95. Epub 2018 Mar 9.

Geriatric Research Education and Clinical Center (GRECC), Tennessee Valley Healthcare System Veterans Administration Medical Center, Nashville, TN, USA; Division of General Internal Medicine and Public Health, Department of Medicine, Vanderbilt University Medical Center, Nashville, TN, USA; Department of Biomedical Informatics, Vanderbilt University Medical Center, Nashville, TN, USA; Department of Biostatistics, Vanderbilt University Medical Center, Nashville, TN, USA.

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http://dx.doi.org/10.1016/j.jbi.2018.03.001DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5920557PMC
April 2018

Interaction patterns of trauma providers are associated with length of stay.

J Am Med Inform Assoc 2018 07;25(7):790-799

Department of Biomedical Informatics, Vanderbilt University Medical Center, Nashville, TN, USA.

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http://dx.doi.org/10.1093/jamia/ocy009DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6016682PMC
July 2018

Predicting Length of Stay for Obstetric Patients via Electronic Medical Records.

Stud Health Technol Inform 2017 ;245:1019-1023

Dept. of Biomedical Informatics, School of Medicine, Vanderbilt University, Nashville, TN, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5860660PMC
June 2018

Learning bundled care opportunities from electronic medical records.

J Biomed Inform 2018 01 22;77:1-10. Epub 2017 Nov 22.

Dept. of Biomedical Informatics, School of Medicine, Vanderbilt University, Nashville, TN, USA; Dept. of Biostatistics, School of Medicine, Vanderbilt University, Nashville, TN, USA; Dept. of Electrical Engineering & Computer Science, School of Engineering, Vanderbilt University, Nashville, TN, USA.

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http://dx.doi.org/10.1016/j.jbi.2017.11.014DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5771885PMC
January 2018

It's all in the timing: calibrating temporal penalties for biomedical data sharing.

J Am Med Inform Assoc 2018 01;25(1):25-31

Department of Biomedical Informatics, Vanderbilt University Medical Center, Nashville, TN, USA.

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http://dx.doi.org/10.1093/jamia/ocx101DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6080807PMC
January 2018

Predicting Negative Events: Using Post-discharge Data to Detect High-Risk Patients.

AMIA Annu Symp Proc 2016 10;2016:1169-1178. Epub 2017 Feb 10.

Vanderbilt University, Nashville, TN.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5333334PMC
August 2017

Identifying collaborative care teams through electronic medical record utilization patterns.

J Am Med Inform Assoc 2017 Apr;24(e1):e111-e120

Department of Biomedical Informatics, Vanderbilt University, Nashville, Tennessee, USA.

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https://academic.oup.com/jamia/article-lookup/doi/10.1093/ja
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http://dx.doi.org/10.1093/jamia/ocw124DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6080725PMC
April 2017

Is the Juice Worth the Squeeze? Costs and Benefits of Multiple Human Annotators for Clinical Text De-identification.

Methods Inf Med 2016 Aug 13;55(4):356-64. Epub 2016 Jul 13.

David S. Carrell, PhD, Group Health Research Institute, 1730 Minor Ave, Suite 1600, Seattle, WA 98101, USA, E-mail:

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http://dx.doi.org/10.3414/ME15-01-0122DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5194214PMC
August 2016

Optimizing annotation resources for natural language de-identification via a game theoretic framework.

J Biomed Inform 2016 06 25;61:97-109. Epub 2016 Mar 25.

Dept. of Electrical Engineering & Computer Science, Vanderbilt University, Nashville, TN, United States; Dept. of Biomedical Informatics, Vanderbilt University, Nashville, TN, United States.

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http://dx.doi.org/10.1016/j.jbi.2016.03.019DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4996128PMC
June 2016

Preserving temporal relations in clinical data while maintaining privacy.

J Am Med Inform Assoc 2016 11 24;23(6):1040-1045. Epub 2016 Mar 24.

Department of Biomedical Informatics, School of Medicine, Vanderbilt University, Nashville, TN 37203, USA.

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http://dx.doi.org/10.1093/jamia/ocw001DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5070517PMC
November 2016

A multi-institution evaluation of clinical profile anonymization.

J Am Med Inform Assoc 2016 Apr 13;23(e1):e131-7. Epub 2015 Nov 13.

Department of Biomedical Informatics, Vanderbilt University, Nashville, TN, USA Department of Electrical Engineering & Computer Science, Vanderbilt University, Nashville, TN, USA

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http://jamia.oxfordjournals.org/content/jaminfo/early/2015/1
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http://jamia.oxfordjournals.org/lookup/doi/10.1093/jamia/ocv
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http://dx.doi.org/10.1093/jamia/ocv154DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4954623PMC
April 2016

R-U policy frontiers for health data de-identification.

J Am Med Inform Assoc 2015 Sep 24;22(5):1029-41. Epub 2015 Apr 24.

Department of Electrical Engineering & Computer Science, Vanderbilt University, Nashville, TN, USA Department of Biomedical Informatics, Vanderbilt University, Nashville, TN, USA.

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http://dx.doi.org/10.1093/jamia/ocv004DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4986667PMC
September 2015

A game theoretic framework for analyzing re-identification risk.

PLoS One 2015 25;10(3):e0120592. Epub 2015 Mar 25.

Department of Biomedical Informatics, Vanderbilt University, Nashville, Tennessee, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0120592PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4373733PMC
March 2016

Ensuring patient privacy in data sharing for postapproval research.

N Engl J Med 2014 Oct;371(17):1644-9

From the Program on Regulation, Therapeutics, and Law, Division of Pharmacoepidemiology and Pharmacoeconomics, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston (A.S., A.S.K., J.J.G., S.S.); and the Department of Biomedical Informatics, School of Medicine, and the Department of Electrical Engineering and Computer Science, Vanderbilt University, Nashville (B.A.M.).

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http://dx.doi.org/10.1056/NEJMsb1405487DOI Listing
October 2014

SecureMA: protecting participant privacy in genetic association meta-analysis.

Bioinformatics 2014 Dec 21;30(23):3334-41. Epub 2014 Aug 21.

Department of Electrical Engineering & Computer Science, Vanderbilt University, Nashville, TN 37232, USA, Department of Computer Science, University of Texas at Dallas, Richardson, TX 75080, USA, Department of Biomedical Informatics, Center for Human Genetics Research, Department of Molecular Physiology and Biophysics and Department of Medicine, Vanderbilt University, Nashville, TN 37232, USA Department of Electrical Engineering & Computer Science, Vanderbilt University, Nashville, TN 37232, USA, Department of Computer Science, University of Texas at Dallas, Richardson, TX 75080, USA, Department of Biomedical Informatics, Center for Human Genetics Research, Department of Molecular Physiology and Biophysics and Department of Medicine, Vanderbilt University, Nashville, TN 37232, USA.

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http://dx.doi.org/10.1093/bioinformatics/btu561DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4296153PMC
December 2014

De-identification of clinical narratives through writing complexity measures.

Int J Med Inform 2014 Oct 24;83(10):750-67. Epub 2014 Jul 24.

Department of Electrical Engineering & Computer Science, Vanderbilt University, Nashville, TN, United States; Department of Biomedical Informatics, Vanderbilt University, Nashville, TN, United States.

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http://dx.doi.org/10.1016/j.ijmedinf.2014.07.002DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4215974PMC
October 2014

Limestone: high-throughput candidate phenotype generation via tensor factorization.

J Biomed Inform 2014 Dec 16;52:199-211. Epub 2014 Jul 16.

School of Computational Science and Engineering at College of Computing, Georgia Institute of Technology, Atlanta, GA 30332, United States.

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http://dx.doi.org/10.1016/j.jbi.2014.07.001DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6563906PMC
December 2014

Size matters: how population size influences genotype-phenotype association studies in anonymized data.

J Biomed Inform 2014 Dec 16;52:243-50. Epub 2014 Jul 16.

Department of Biomedical Informatics, School of Medicine, Vanderbilt University, 2525 West End Avenue, Suite 1030, Nashville, TN 37203, USA; Department of Electrical Engineering and Computer Science, School of Engineering, Vanderbilt University, 2525 West End Avenue, Suite 1030, Nashville, TN 37203, USA.

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http://dx.doi.org/10.1016/j.jbi.2014.07.005DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4260994PMC
December 2014

Ethical, legal, and social implications of incorporating genomic information into electronic health records.

Genet Med 2013 Oct 12;15(10):810-6. Epub 2013 Sep 12.

Department of Internal Medicine, Wayne State University School of Medicine, Detroit, Michigan, USA.

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http://dx.doi.org/10.1038/gim.2013.117DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3926430PMC
October 2013

Enabling genomic-phenomic association discovery without sacrificing anonymity.

PLoS One 2013 6;8(2):e53875. Epub 2013 Feb 6.

Department of Biomedical Informatics, School of Medicine, Vanderbilt University, Nashville, TN, USA.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0053875PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3566194PMC
December 2013

An Entropy Approach to Disclosure Risk Assessment: Lessons from Real Applications and Simulated Domains.

Decis Support Syst 2011 Apr;51(1):10-20

Department of Statistics, Harvard University, Cambridge, MA 02138, USA.

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http://dx.doi.org/10.1016/j.dss.2010.11.014DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3107517PMC
April 2011

A modeling environment for patient portals.

AMIA Annu Symp Proc 2007 Oct 11:201-5. Epub 2007 Oct 11.

Department of Electrical Engineering and Computer Science, School of Engineering, Vanderbilt University, Nashville, TN, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2655806PMC
October 2007

A secure protocol to distribute unlinkable health data.

AMIA Annu Symp Proc 2005 :485-9

Institute for Software Research International, School of Computer Science, Carnegie Mellon University, Pittsburgh, Pennsylvania, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1560734PMC
February 2007

An evaluation of the current state of genomic data privacy protection technology and a roadmap for the future.

Authors:
Bradley A Malin

J Am Med Inform Assoc 2005 Jan-Feb;12(1):28-34. Epub 2004 Oct 18.

Carnegie Mellon University, School of Computer Science, Institute for Software Research International, Wean Hall Room 1320 B, Pittsburgh, PA 15213-3890, USA.

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http://dx.doi.org/10.1197/jamia.M1603DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC543823PMC
February 2005

Correlating web usage of health information with patient medical data.

Authors:
Bradley A Malin

Proc AMIA Symp 2002 :484-8

School of Computer Science, Carnegie Mellon University, Pittsburgh, PA, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2244241PMC
April 2003