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Publications Authored by Boyko Kakaradov | PubFacts
Boyko Kakaradov

Boyko Kakaradov

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13Publications

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Single-Cell Alternative Splicing Analysis with Expedition Reveals Splicing Dynamics during Neuron Differentiation.

Mol Cell 2017 Jul 29;67(1):148-161.e5. Epub 2017 Jun 29.

Department of Cellular and Molecular Medicine, Stem Cell Program and Institute for Genomic Medicine, University of California, San Diego, La Jolla, CA 92093, USA; Bioinformatics and Systems Biology Graduate Program, University of California, San Diego, La Jolla, CA 92093, USA; Biomedical Sciences Graduate Program, University of California, San Diego, La Jolla, CA 92093, USA; Department of Physiology, Yong Loo Lin School of Medicine, National University of Singapore, Singapore 119077, Singapore; Molecular Engineering Laboratory, A(∗)STAR, Singapore 138632, Singapore. Electronic address:

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http://dx.doi.org/10.1016/j.molcel.2017.06.003DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5540791PMC
July 2017

Reply to: "CD8(+) T cell diversification by asymmetric cell division".

Nat Immunol 2015 Sep;16(9):893-4

Department of Medicine, University of California San Diego, La Jolla, CA, USA.

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http://dx.doi.org/10.1038/ni.3234DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4758127PMC
September 2015

Early specification of CD8+ T lymphocyte fates during adaptive immunity revealed by single-cell gene-expression analyses.

Nat Immunol 2014 Apr 2;15(4):365-372. Epub 2014 Mar 2.

Department of Medicine, University of California San Diego, La Jolla, CA 92093, USA.

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http://dx.doi.org/10.1038/ni.2842DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3968536PMC
April 2014

Challenges in estimating percent inclusion of alternatively spliced junctions from RNA-seq data.

BMC Bioinformatics 2012 Apr 19;13 Suppl 6:S11. Epub 2012 Apr 19.

Department of Electrical and Computer Engineering, University of Toronto, ON, Canada.

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http://dx.doi.org/10.1186/1471-2105-13-S6-S11DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3330053PMC
April 2012

Error correction of high-throughput sequencing datasets with non-uniform coverage.

Bioinformatics 2011 Jul;27(13):i137-41

Department of Computer Science and Engineering, University of California, San Diego, CA, USA.

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http://dx.doi.org/10.1093/bioinformatics/btr208DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3117386PMC
July 2011