Publications by authors named "Betsy Ferguson"

39Publications

Spontaneous Gene Mutation in Rhesus Macaques (): A Novel Nonhuman Primate Model of Epidermolysis Bullosa Simplex.

Vet Pathol 2020 03 25;57(2):344-348. Epub 2020 Feb 25.

Pathology Services Unit, Division of Comparative Medicine, Oregon National Primate Research Center, Oregon Health & Science University, Beaverton, OR, USA.

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http://dx.doi.org/10.1177/0300985819900354DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7255619PMC
March 2020

Bardet-Biedl Syndrome in rhesus macaques: A nonhuman primate model of retinitis pigmentosa.

Exp Eye Res 2019 12 4;189:107825. Epub 2019 Oct 4.

Division of Neuroscience, Oregon National Primate Research Center, Oregon Health & Sciences University, Beaverton, OR, 97006, USA; Casey Eye Institute, Oregon Health & Sciences University, Portland, OR, 97239, USA. Electronic address:

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http://dx.doi.org/10.1016/j.exer.2019.107825DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7064310PMC
December 2019

VariantQC: a visual quality control report for variant evaluation.

Bioinformatics 2019 12;35(24):5370-5371

Division of Genetics, Beaverton, OR, USA.

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http://dx.doi.org/10.1093/bioinformatics/btz560DOI Listing
December 2019

Analysis of 100 high-coverage genomes from a pedigreed captive baboon colony.

Genome Res 2019 05 29;29(5):848-856. Epub 2019 Mar 29.

Institute for Human Genetics, University of California, San Francisco, California 94143, USA.

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http://dx.doi.org/10.1101/gr.247122.118DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6499309PMC
May 2019

mGAP: the macaque genotype and phenotype resource, a framework for accessing and interpreting macaque variant data, and identifying new models of human disease.

BMC Genomics 2019 Mar 6;20(1):176. Epub 2019 Mar 6.

Division of Genetics, Oregon National Primate Research Center, Oregon Health and Sciences University, Beaverton, OR, 97006, USA.

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http://dx.doi.org/10.1186/s12864-019-5559-7DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6402181PMC
March 2019

Modulation of Gpr39, a G-protein coupled receptor associated with alcohol use in non-human primates, curbs ethanol intake in mice.

Neuropsychopharmacology 2019 05 5;44(6):1103-1113. Epub 2019 Jan 5.

Division of Neuroscience, Oregon National Primate Research Center, Oregon Health and Sciences University, Beaverton, Oregon, USA.

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http://www.nature.com/articles/s41386-018-0308-1
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http://dx.doi.org/10.1038/s41386-018-0308-1DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6461847PMC
May 2019

Whole genome sequencing predicts novel human disease models in rhesus macaques.

Genomics 2017 07 23;109(3-4):214-220. Epub 2017 Apr 23.

Division of Neurosciences, Oregon National Primate Research Center, Oregon Health & Sciences University, Beaverton, OR 97006, United States. Electronic address:

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http://dx.doi.org/10.1016/j.ygeno.2017.04.001DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5513488PMC
July 2017

Genome-wide analysis of the nucleus accumbens identifies DNA methylation signals differentiating low/binge from heavy alcohol drinking.

Alcohol 2017 05 10;60:103-113. Epub 2016 Nov 10.

Division of Neurosciences, Oregon National Primate Research Center, Oregon Health & Science University, Beaverton, OR, 97006, USA.

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http://dx.doi.org/10.1016/j.alcohol.2016.11.003DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5420479PMC
May 2017

Anti-Müllerian hormone is produced heterogeneously in primate preantral follicles and is a potential biomarker for follicle growth and oocyte maturation in vitro.

J Assist Reprod Genet 2016 Dec 15;33(12):1665-1675. Epub 2016 Sep 15.

Division of Neuroscience, Oregon National Primate Research Center, 505 NW 185th Avenue, Beaverton, OR, 97006, USA.

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http://dx.doi.org/10.1007/s10815-016-0804-3DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5234704PMC
December 2016

Immunopathology of Japanese macaque encephalomyelitis is similar to multiple sclerosis.

J Neuroimmunol 2016 Feb 2;291:1-10. Epub 2015 Dec 2.

Vaccine and Gene Therapy Institute, Oregon Health & Science University (OHSU), 505 NW 185th Avenue, Beaverton, OR 97006, United States; Division of Pathobiology and Immunology, ONPRC, 505 NW 185th Avenue, Beaverton, OR 97006, United States. Electronic address:

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http://dx.doi.org/10.1016/j.jneuroim.2015.11.026DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4748211PMC
February 2016

Genome typing of nonhuman primate models: implications for biomedical research.

Trends Genet 2014 Nov 18;30(11):482-7. Epub 2014 Jun 18.

Gene Bank of Primates and Primate Genetics Laboratory, German Primate Center, Leibniz Institute for Primate Research, Goettingen, Germany.

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http://dx.doi.org/10.1016/j.tig.2014.05.004DOI Listing
November 2014

An empirical comparison of short tandem repeats (STRs) and single nucleotide polymorphisms (SNPs) for relatedness estimation in Chinese rhesus macaques (Macaca mulatta).

Am J Primatol 2014 Apr 22;76(4):313-24. Epub 2013 Nov 22.

Molecular Anthropology Laboratory, Department of Anthropology, University of California, Davis, California; California National Primate Research Center, University of California, Davis, California.

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http://dx.doi.org/10.1002/ajp.22235DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4386665PMC
April 2014

A single-nucleotide polymorphism in the EAP1 gene is associated with amenorrhea/oligomenorrhea in nonhuman primates.

Endocrinology 2012 Jan 29;153(1):339-49. Epub 2011 Nov 29.

Division of Neuroscience, Oregon National Primate Research Center, Oregon Health and Science University, Neuroscience, 505 NW 185th Avenue, Beaverton, Oregon 97006, USA.

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http://dx.doi.org/10.1210/en.2011-1540DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3249686PMC
January 2012

Mitochondrial DNA deletions and differential mitochondrial DNA content in Rhesus monkeys: implications for aging.

Biochim Biophys Acta 2012 Feb 28;1822(2):111-9. Epub 2011 Oct 28.

Neuroscience Division, Oregon National Primate Research Center, Oregon Health & Science University, 505 NW 185th Avenue, Beaverton, OR 97006, USA.

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http://dx.doi.org/10.1016/j.bbadis.2011.10.014DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3249524PMC
February 2012

Variable prevalence and functional diversity of the antiretroviral restriction factor TRIMCyp in Macaca fascicularis.

J Virol 2011 Oct 27;85(19):9956-63. Epub 2011 Jul 27.

Department of Microbiology, University of Washington, Seattle, WA 98121, USA.

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http://dx.doi.org/10.1128/JVI.00097-11DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3196437PMC
October 2011

MonkeySNP: a web portal for non-human primate single nucleotide polymorphisms.

Bioinformatics 2008 Nov 16;24(22):2645-6. Epub 2008 Sep 16.

Oregon National Primate Research Center, Oregon Health & Science University, 505 N.W. 185th Avenue, Beaverton, OR 97006, USA.

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http://dx.doi.org/10.1093/bioinformatics/btn493DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2579713PMC
November 2008

Who is at risk? Population characterization of alcohol self-administration in nonhuman primates helps identify pathways to dependence.

Alcohol Res Health 2008 ;31(4):289-97

Department of Behavioral Neuroscience, both at the Oregon Health & Science University, Portland, Oregon.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3860464PMC
April 2015

Single nucleotide polymorphisms (SNPs) are highly conserved in rhesus (Macaca mulatta) and cynomolgus (Macaca fascicularis) macaques.

BMC Genomics 2007 Dec 31;8:480. Epub 2007 Dec 31.

Genetics Research and Informatics Program, Oregon National Primate Research Center, Oregon Health & Sciences University, Beaverton, OR 97006, USA.

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http://bmcgenomics.biomedcentral.com/articles/10.1186/1471-2
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http://dx.doi.org/10.1186/1471-2164-8-480DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2248198PMC
December 2007

Identification of MHC class I sequences in Chinese-origin rhesus macaques.

Immunogenetics 2008 Jan 21;60(1):37-46. Epub 2007 Dec 21.

Department of Pathology and Laboratory Medicine, University of Wisconsin-Madison, Madison, WI 53706, USA.

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http://dx.doi.org/10.1007/s00251-007-0267-xDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2830873PMC
January 2008

Evolutionary and biomedical insights from the rhesus macaque genome.

Authors:
Richard A Gibbs Jeffrey Rogers Michael G Katze Roger Bumgarner George M Weinstock Elaine R Mardis Karin A Remington Robert L Strausberg J Craig Venter Richard K Wilson Mark A Batzer Carlos D Bustamante Evan E Eichler Matthew W Hahn Ross C Hardison Kateryna D Makova Webb Miller Aleksandar Milosavljevic Robert E Palermo Adam Siepel James M Sikela Tony Attaway Stephanie Bell Kelly E Bernard Christian J Buhay Mimi N Chandrabose Marvin Dao Clay Davis Kimberly D Delehaunty Yan Ding Huyen H Dinh Shannon Dugan-Rocha Lucinda A Fulton Ramatu Ayiesha Gabisi Toni T Garner Jennifer Godfrey Alicia C Hawes Judith Hernandez Sandra Hines Michael Holder Jennifer Hume Shalini N Jhangiani Vandita Joshi Ziad Mohid Khan Ewen F Kirkness Andrew Cree R Gerald Fowler Sandra Lee Lora R Lewis Zhangwan Li Yih-Shin Liu Stephanie M Moore Donna Muzny Lynne V Nazareth Dinh Ngoc Ngo Geoffrey O Okwuonu Grace Pai David Parker Heidie A Paul Cynthia Pfannkoch Craig S Pohl Yu-Hui Rogers San Juana Ruiz Aniko Sabo Jireh Santibanez Brian W Schneider Scott M Smith Erica Sodergren Amanda F Svatek Teresa R Utterback Selina Vattathil Wesley Warren Courtney Sherell White Asif T Chinwalla Yucheng Feng Aaron L Halpern Ladeana W Hillier Xiaoqiu Huang Pat Minx Joanne O Nelson Kymberlie H Pepin Xiang Qin Granger G Sutton Eli Venter Brian P Walenz John W Wallis Kim C Worley Shiaw-Pyng Yang Steven M Jones Marco A Marra Mariano Rocchi Jacqueline E Schein Robert Baertsch Laura Clarke Miklós Csürös Jarret Glasscock R Alan Harris Paul Havlak Andrew R Jackson Huaiyang Jiang Yue Liu David N Messina Yufeng Shen Henry Xing-Zhi Song Todd Wylie Lan Zhang Ewan Birney Kyudong Han Miriam K Konkel Jungnam Lee Arian F A Smit Brygg Ullmer Hui Wang Jinchuan Xing Richard Burhans Ze Cheng John E Karro Jian Ma Brian Raney Xinwei She Michael J Cox Jeffery P Demuth Laura J Dumas Sang-Gook Han Janet Hopkins Anis Karimpour-Fard Young H Kim Jonathan R Pollack Tomas Vinar Charles Addo-Quaye Jeremiah Degenhardt Alexandra Denby Melissa J Hubisz Amit Indap Carolin Kosiol Bruce T Lahn Heather A Lawson Alison Marklein Rasmus Nielsen Eric J Vallender Andrew G Clark Betsy Ferguson Ryan D Hernandez Kashif Hirani Hildegard Kehrer-Sawatzki Jessica Kolb Shobha Patil Ling-Ling Pu Yanru Ren David Glenn Smith David A Wheeler Ian Schenck Edward V Ball Rui Chen David N Cooper Belinda Giardine Fan Hsu W James Kent Arthur Lesk David L Nelson William E O'brien Kay Prüfer Peter D Stenson James C Wallace Hui Ke Xiao-Ming Liu Peng Wang Andy Peng Xiang Fan Yang Galt P Barber David Haussler Donna Karolchik Andy D Kern Robert M Kuhn Kayla E Smith Ann S Zwieg

Science 2007 Apr;316(5822):222-34

Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX 77030, USA.

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http://dx.doi.org/10.1126/science.1139247DOI Listing
April 2007

Single nucleotide polymorphisms (SNPs) distinguish Indian-origin and Chinese-origin rhesus macaques (Macaca mulatta).

BMC Genomics 2007 Feb 7;8:43. Epub 2007 Feb 7.

Genetics Research and Informatics Program, Oregon National Primate Research Center, Oregon Health and Sciences University, Beaverton, OR 97006, USA.

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http://dx.doi.org/10.1186/1471-2164-8-43DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1803782PMC
February 2007

Genetic characterization of rhesus macaques (Macaca mulatta) in Nepal.

Am J Primatol 2006 May;68(5):445-55

Department of Psychology, University of Washington, Seattle, Washington, USA.

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http://dx.doi.org/10.1002/ajp.20240DOI Listing
May 2006

Microsatellite markers for standardized genetic management of captive colonies of rhesus macaques (Macaca mulatta).

Am J Primatol 2006 Jan;68(1):73-95

Veterinary Genetics Laboratory, School of Veterinary Medicine, California National Primate Research Center, University of California-Davis, California 95616, USA.

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http://dx.doi.org/10.1002/ajp.20207DOI Listing
January 2006